Transitional fossils in 18 minutes

Posted 15 March 2008 by

We keep hearing from Intelligent Design Creationists that the fossil record is lacking in transitional fossils. To support their claims, they consistently quote mine statement by Gould and others while ignoring the actual data. Thanks to modern technology, Youtube presents Transitional Fossils I and II by DonExodus2 And check out the full offerings by DonExodus2

I'm a 24 year old male in Chapel Hill, NC. Most of my videos pertain to the subject of evolution, creationism, and religion. Education: Highschool BS Evolutionary Biology- UNC-Charlotte. Doctoral- UNC-Chapel Hill Theological- 8 semesters at Cathedral Preparatory school from 99-02. Im just getting into youtube, and will be adding videos pretty rapidly in the coming weeks.

131 Comments

slang · 15 March 2008

I liked it.. but then at 6:15ish it says "needs to develop" and then "the fossil record clearly shows all of these being developed". You know that it will be parsed by some as "Oh? How did that fish KNOW it had to develop waterproof skin to become a reptile? Well? See!? You can't answer that!!". Use enough long words and you'll end up with people picking the words they do know and interpret them as best they can (ie not always very well).

I don't know how to make this basic information more accessible, maybe with easier to remember names... I can't spell austrapheliticus without help but I know how to write Lucy. Scientific accuracy is one thing.. outreach potential is quite another.

Jackelope King · 15 March 2008

I fully support the teaching of biology set to Neil Young and Grand Funk.

afarensis, FCD · 15 March 2008

Great find

Karen S · 15 March 2008

Thanks, and keep up the good work!

PvM · 15 March 2008

Hat Tip to Reed Cartwright.

paul fcd · 15 March 2008

perfect

Craig T · 16 March 2008

Jackelope King: I fully support the teaching of biology set to Neil Young and Grand Funk.
I prefer music by T. Rex and the Trogs.

Science Nut · 16 March 2008

"I fully support the teaching of biology set to Neil Young and Grand Funk."

Kool music. I think I'll watch it again with the headphones on!

The music will probably turn the fundies off faster than the facts. Should it be re-mixed with something like Lawrence Welk?

;-)

"...I'm getting closer to my home"...Oh yeahhh!

Crudely Wrott · 16 March 2008

Oh yes! Clear and succinct and fine background tunes. More, please.

Keith Eaton · 16 March 2008

Evolution makes no predictions by definition. It is an uncaring molecular process driven by random mutations and ratcheted by additional random processes, called selective pressures. Weather, climate, predation, disease, accidents, catastrophes and floods are all dominated by randomness and thus two concatenated random processes cannot predict anything.

Evolution curve fits observations over intervals by adding such variables as may be necessary to connect the dots, much like a multivariate regression where with enough variables invented any continuous curve cab be approximated over a short interval of outcomes.

And since mutational effects are 99% harmful or useless even when expressed there should be millions of fossils that do fit any series such as so called whale evolution where the blowhoile apparatus supposedly evolved as teh nose moved steadily backward on teh head to the top.

But where are all the blowholes or noses moving in any other of the 359 degree directions, there should be many with nostrils moving sideways, down at all angles, after all successive mutational expressions don't care. It's true only those that proved "beneficial" would persist, but that does not excuse the absense of failed expressions that would be 100/1 in evidence. This is of course the case in all other so called transitional series where every fossil is perfect fit in the series....how convenient...anbd impossible.

Evolution the science for the committed myopic community.

PvM · 16 March 2008

Evolution makes no predictions by definition. It is an uncaring molecular process driven by random mutations and ratcheted by additional random processes, called selective pressures. Weather, climate, predation, disease, accidents, catastrophes and floods are all dominated by randomness and thus two concatenated random processes cannot predict anything.

— Keith Eaton
A common confusion about evolution is that it is random, when in fact it is all but random. While Keith is correct that we may be unable to identify all the selective pressures involved, this does not mean that evolution therefore is random or unpredictable. Evolution is a process which includes as one of its processes variation, inheritance and selection. All these processes are observed in nature and in fact some excellent research exists that shows natural selection in action in nature. In addition, real predictions can and have been made based on evolutionary principles, contrary to Keith's unsupported assertion that "evolution makes no predictions by definition". Even Darwin made some predictions which turned out to be quite successful.

Evolution curve fits observations over intervals by adding such variables as may be necessary to connect the dots, much like a multivariate regression where with enough variables invented any continuous curve cab be approximated over a short interval of outcomes.

— Keith Eaton
An unsupported assertion. Perhaps Keith could provide us with an example?

And since mutational effects are 99% harmful or useless even when expressed there should be millions of fossils that do fit any series such as so called whale evolution where the blowhoile apparatus supposedly evolved as teh nose moved steadily backward on teh head to the top.

Again we notice a problem here with reality. Most mutational effects are neutral, or near neutral, some are beneficial and some are harmful. However confusing neutral with useless, ignores the large amount of evidence in support of the importance and relevance of such neutral variation. Hint: neutrality is an essential component for the success of evolution as it improves evolvability. As to whale evolution, again we see intermediates where the blow hole is slowly moving to the top. Should there be millions of fossils, Keith does not explain why and in fact the number of transitionals, however impressive, match expected numbers based on some simple back of the envelope calculations.

Evolution the science for the committed myopic community.

So far the only myopic person in this thread appears to the Keith who can be observed making many unsubstantiated comments, while ignoring the 18 minutes of transitional fossils video So who is myopic here?

Richard Simons · 16 March 2008

And since mutational effects are 99% harmful or useless even when expressed there should be millions of fossils that do fit any series such as so called whale evolution
I see we've gone from 'there are no intermediate fossils' to 'there should be millions', which I suppose is progress. Keep it up, Keith!
but that does not excuse the absense of failed expressions that would be 100/1 in evidence.
Why would they be present if they failed? That comment is even dottier than your norm.

PvM · 16 March 2008

I see we’ve gone from ‘there are no intermediate fossils’ to ‘there should be millions’, which I suppose is progress. Keep it up, Keith!

No logic nor supporting analysis is presented by Keith, showing how ignorance seems to be a driving force behind keith's myopic vision (and may I add understanding) of evolutionary theory and the available data and evidence. Of course, what is even more noticable is an absence of any ID relevant explanations. Figures.

Jackelope King · 16 March 2008

While I'm now certain that Keith is a parody, his "where are all the failures" point should be addressed.

Only lucky critters get fossilized. The odds are very poor that any given critter is going to wind up preserved and then dug up so that we can bring it into a lab to study. Some environments lend themselves more to fossilization than others, but by and large, fossilization is going to be a rarity, just like the "99% harmful" mutations (ignoring for a moment that this is completely wrong... most mutations are neutral or nearly neutral, thanks to wobble in the codons).

But let's keep assuming that 99% of mutations are going to be bad. "Bad" in this case means lowered fitness, which means fewer viable offspring (in many cases, it would be zero, as the organism might not even gestate completely and die before birth/hatching), while that 1% of mutations would be beneficial, producing more offspring. That would mean that, over a few generations, there would be MANY more examples of critters with that beneficial mutation than all of the ones with bad mutations (many of which might never reach a stage in development where fossilization is at all possible). Which one is going to be more likely to fossilize: an example of a mutation that has propagated through a population for a few generations, or one which was seen only once or twice in a few critters who never had offspring? More examples means there's more chance to fossilize, so the odds are heavily against the hypothetical "nose moving in other directions" that Keith the Parody mentions.

To take a more modern example, let's say you're going into a landfill to look for an mp3 player with a specific feature to chart the "development of mp3 players". If that feature is something found in the iPod line (let's go with the scroll wheel), you're more likely to find it, because there were more of those models manufactured and sold than any other mp3 player (ie it was more successful and more fit). It would be more likely to wind up in the particular pile in the particular landfill you happened to be digging in.

Rolf · 16 March 2008

K eaton:
even when expressed there should be millions of fossils that do fit any series such as so called whale evolution
Why are not the ocean beds all over the planet covered with fossils?

David Stanton · 16 March 2008

Once again Keith displays his ignorance. Where to start?

First, evolution is not an entirely random process as PvM pointed out and as this guy no doubt already knows.

Second, just because there are some random elements in evolution, doesn't mean that no predictions can be made. So Keith, the outcome of flipping a coin is random. Can you make any predictions as to what the outcome would be if you flipped the coin one million times? If not, you don't understand probability. If so, then your contention is falsified.

Third, there are plenty of examples of large lineages where many species went extinct, many without giving rise to any other species. Just look at the horse lineage. How many species existed in the past? How many species exist today? How many toes do they run on? So Keith, is three intermediate betwewen four and one? Then look at the hominid lineage. How do you explain Neanderthals? If you say they are an intermediate in the human lineage then you concede that humans evolved. If you don't thyink that they are intermediates, then once again your contention is conclusively falsified.

Fourth, as for whale evolution, how do you explain the fact that there are fossils that document the intermediate forms in the movement of the whale nostrils? So if fossils are found that don't fit in as intermediates, will you concede that those would be no problem for evolutionary theory or would you then claim that evolution could not explain them?

Keith, grow up, learn some biology and go somewhere else, not necessarily in that order.

raven · 16 March 2008

Beneficial mutations are common and we see them every day. Antibiotic resistance mutations, anti-biocide mutations, anticancer drug mutations and so on. These are beneficial to the pathogens although humans consider them problems. They are responsible for killing millions worldwide every year. They are also known in humans, adult lactose tolerance, amylase high expression, HIV resistance, resistance to artherosclerosis. No beneficial mutations is just a creo lie. All they have are lies. Below is one of many laboratory studies quantitating beneficial mutations.
Science. 2007 Aug 10;317(5839):813-5. Links Adaptive mutations in bacteria: high rate and small effects.Perfeito L, Fernandes L, Mota C, Gordo I. Instituto Gulbenkian de Ciência, Rua da Quinta Grande, number 6, 2780-156 Oeiras, Portugal. Evolution by natural selection is driven by the continuous generation of adaptive mutations. We measured the genomic mutation rate that generates beneficial mutations and their effects on fitness in Escherichia coli under conditions in which the effect of competition between lineages carrying different beneficial mutations is minimized. We found a rate on the order of 10(-5) per genome per generation, which is 1000 times as high as previous estimates, and a mean selective advantage of 1%. Such a high rate of adaptive evolution has implications for the evolution of antibiotic resistance and pathogenicity.

PvM · 16 March 2008

No beneficial mutations is just a creo lie. All they have are lies.

True however Keith was careful in his formulation that 99% of the mutations are detrimental or useless. However the last part shows a common confusion amongst ID creationists, namely that neutral or near neutral mutations are inherently useless. They are useful in that they allow genetic variation to spread through a population without affecting the fitness or phenotype. However, such a variation, which may initially be near neutral can acquire beneficial roles, for instance when environmental conditions change, or neutral variation can affect evolvability by providing a reservoir of genetic variation. Claiming that neutral mutations are just useless is a statement of ignorance at best. I could point to various scientific works that explain this but until Keith acknowledges that he needs to do more research, I will not waste my time, anyone with an internet connection can do the research for themselves (perhaps with the exception of William Wallace, our creationist friend who seems to be unable to find the reports how to homogenize data for surface observation stations. Ignorance of evolution and Global warming so often seems to correlate that one may start to wonder if there is actually a causal explanation in order.)

harold · 16 March 2008

It is an uncaring molecular process driven by random mutations and ratcheted by additional random processes, called selective pressures
A comment on evolution and "randomness". Let's just deal with "mutation and natural selection" for now. Let's also just deal with mutations that arise during cellular reproduction, although mutations may occur in non-dividing cells. Let's also assume that the genomes we are talking about are DNA. These very minor simplifications won't hurt, and will make it easier to be clear. Whatever mutations, that is, whatever variance of offspring DNA from parent DNA that occur, they are independent of the human-perceived "needs" or "desires" of the organism possessing the parent DNA. Are they "random"? It depends on what you mean by random. The probability that a given segment of DNA will experience a "mutation" of any sort is impacted by all sorts of exogenous and endogenous factors, like level of mutagens in the environment, chromosome structure and position of the segment on the chromosome, sequence of the segment in question, other biochemical features of the segment (such as methylation), etc. So someone might argue that mutation is not entirely "random", in the sense that a given type of mutation would not be equally likely to occur at any point in the genome. But someone else might argue, more correctly perhaps, that if we could account for a sufficient number of the factors that affect, in a significant way, the probability of a given mutation at a given site, mutation occurence would appear probablistic, or "random", to human eyes, within those conditions. (In other words we might know that there would be a certain probability of a certain mutation at a certain site, just as we know that a roulette ball has a certain probability of landing in a certain spot - in that case we know the probability to a high degree of certainty, assuming a well-engineered table - but don't know when it will land in that spot.) However, whether we call mutations "random" or not, they are absolutely independent of human-perceived "needs" or "desires" of the organism. If a mutation has a potential phenotypic effect, those organisms that express the effect may (or may not) be acted on by natural selection, one way or the other. Natural selection is almost never conceived of as purely random. The elements that make up the environment may arise in so complex a manner as to be random to human eyes - climate, weather, soil conditions, other organisms present. The occurence of specific mutations may be perceived as a random sampling from probability distribution. The effects of natural selection itself are often modeled, in classical population genetics, in a probablistic and statistical way. We can easily note that thinking of the expected number of offspring, and the variance of that expected value, from individuals posessing or lacking a certain trait, is an obvious way to model natural selection. (In the case of severe selection like the killing of all population members who lack some sort of resistance element, it becomes simpler). However, in the long run, natural selection tends to have such a strong directional effect that it is not conceived of as random.

Joel · 16 March 2008

@harold,

Nice, detailed rebuttal.

It might be simpler and more accurate to use "random" in a different sense, though. Mutation is "random" in the sense that it is not controlled by the needs of the organism in which it appears. Random as opposed to "directed" (e.g., Larmarkian).

I'm not disagreeing with the points you made, but it seemed like an additional and useful way of explaining "random" mutation.

Peter Henderson · 16 March 2008

How do you explain Neanderthals? If you say they are an intermediate in the human lineage then you concede that humans evolved. If you don’t thyink that they are intermediates, then once again your contention is conclusively falsified.

Dave:Creationists see neanderthals as being fully human: http://www.answersingenesis.org/articles/am/v2/n4/red-haired-fast-talking

Recent research publications indicate that some Neanderthals may have had red-hair, fair complexions, and the capacity for speech and language. This is not surprising to creationists who have long held that Neanderthals are fully human, descendants of Adam and Eve, and therefore would be expected to share many modern human characteristics. These findings are contrary to evolutionary-based predictions of Neanderthals as knuckle dragging, dark-haired, grunting savages.

David Stanton · 16 March 2008

Peter,

I know that some creationists think that neanderthals were completely human, however, they are completely wrong. Neanderthals were very distinct morphologically, culturally and genetically. The genetic evidence clearly indicates that they were not humans. I can provide references if you wish. The best hypothesis based on current evidence is that they are an extinct sister group to homo sapiens that may or may not have made a slight genetic contribution to the modern human gene pool.

In any event, they certainly fulfill the criteria put forward by Keith. They were an unsuccessful hominid lineage, whether or not they were in the direct line of descent to modern humans is immaterial. And I suppose we could add Homo florensis to the list as well.

Keith just doesn't seem to get the concept of the tree of life. If he did, he wouldn't make such nonsensical claims.

raven · 16 March 2008

some Neanderthals may have had red-hair, fair complexions, and the capacity for speech and language. This is not surprising to creationists who have long held that Neanderthals are fully human,
AIG is lying again. Since when do red hair and fair complexions have anything to do with being fully human? Orangutans have red hair. Chinese, Japanese, Africans, Mexicans and Italians are fully human.
These findings are contrary to evolutionary-based predictions of Neanderthals as knuckle dragging, dark-haired, grunting savages.
The evolutionary predictions and findings predicted that Neanderthals would be similar to modern humans. That they were most likely light skinned and capable of speech and thought was discovered by scientists not religious fanatics in Kentucky. The stereotype of Neanderthals as primitive went out before I was born, again due to scientists, not the churches. AIG is taking credit for something they had absolutely nothing to do with. Of course, they forgot to mention that Neanderthals disappeared 26,000 years ago, before the last ice age was over and 20,000 years before the earth was created. LOL

Keith Eaton · 16 March 2008

Where to start with the math and logically challenged...?

The fact that a process has a known distribution means it is random...sort of by definition. The copying errors in DNA are best described as from a uniform distribution without any bias. About 1 per 10**9 base pairs approximately in human DNA according to Wills.

Now if you want to contend that small incremental changes occurred effecting a specific morphological change like a nose/blowhole location then the gene(s) expressing nose location would have to be varying due to mutations on the same gene perhaps several loci, some neutral, some harmful, some beneficial and through selection pressure changes, etc. always were reflected in some perfectly coordinated movement front to top..so be it..but statistically that's essentially impossible.

There would be some increments in a given direction that were so slight that no selective advantage could be distinguished, then perhaps reversion, then sideways, then down...it's absolutely inevitable. Thus although if the advantage is to go deeper into water and be able to breathe it is logical moving up top is the way to go, over eons necessary to effect such it is rediculous to presume there would not be many, many, "failures" in nose location and certainly some would be fossilized. The same can be said fore the enormous number of additional adaptations to get to a sperm whale from a land dwelling, quadruped with its many specialized features. Thuis again many failed experiements...ad finitum over millions of species, yet neat little perfect series are what you claim to construct.

Its a fairy tale.

Neanderthals are currently thought to have interbred with so called fully human populations, perhaps onoly rarely. They were degenerative genetically for reasons not understood..perhaps isolation and interbreeding in small populations, disease,radiation effects localized to their population..no one knows.

The genomes are considered 99% identical to homo sapien, they had the ability for language and speaking in their DNA analysis.

Jeez even the wikipedia site knows this.

Keith Eaton · 16 March 2008

The tree of life is a bush, not a tree and its upsidedown with almost all major taxa, etc. bursting into full fruition folowed by stasis, extinction, and minor variation within narrow vertical limits.

paul fcd · 16 March 2008

Can't you all see that Keith is a parody? please stay on topic.

Ichthyic · 16 March 2008

The fact that a process has a known distribution means it is random…sort of by definition

not at all, actually.

a standard bell-shaped distribution hardly implies complete randomness.

in fact, just the opposite.

if you can find a best fit curve to a distribution of data points that is significant, that indicates non-randomness by definition. However, since you don't appear to understand the difference between "randomness" and "probability distribution"...

Where to start with the math and logically challenged…?

project much, moron?

JGB · 16 March 2008

ad infinitum Keith? There is no infinite series involved. Have you looked at a Hox gene mutant? Do you understand the myriad of variations that organisms possess? For example that most organisms are not perfectly symmetrical in bone size from left to right? Are you aware that increased symmetry increases performance? Are you aware that the mathematics on population genetics nicely predicts a dramatic increase in fixation chance for any beneficial allele, where as there is only a threshold based on population size only for slightly deleterious mutations? And it all ends up as only a chance of fixation (much smaller than the advantageous chance) anyways? You have a non-sensical Platonic idea of a species as being one thing and only one thing with no regard for the tremendous amount of variation within a species. Further your simplistic notions of probability would not even get out of chapter 1 of a college algebra treatment of probability.

PvM · 16 March 2008

Where to start with the math and logically challenged…?

Why not start with yourself? Just a friendly suggestion

The fact that a process has a known distribution means it is random…sort of by definition. The copying errors in DNA are best described as from a uniform distribution without any bias. About 1 per 10**9 base pairs approximately in human DNA according to Wills.

Of course copying errors are but one of the many sources of variation in the genome. What is even more interesting is that since some of the sources of variation are under genetic control, they are open to evolution themselves. In other words, sources of variation can evolve to become more successful.

Now if you want to contend that small incremental changes occurred effecting a specific morphological change like a nose/blowhole location then the gene(s) expressing nose location would have to be varying due to mutations on the same gene perhaps several loci, some neutral, some harmful, some beneficial and through selection pressure changes, etc. always were reflected in some perfectly coordinated movement front to top..so be it..but statistically that’s essentially impossible.

An interesting handwaving argument. Where is that math you promised? Do you really believe that there is a gene expressing nose location? Could you help us identify said gene? Until Keith can show that this is statistically 'essentially impossible' we should reject his objections as a just not so story :-) What the fossils show is how the blow hole, contrary to Keith's assertion, moves further backwards. Now Keith may argue that this move is initiated by something else than variations in genetic information, but it would be hard for Keith to ignore these data. As to the amount of variation needed. Within most species, there is a large source of variation regarding the location and shape and form of for instance the nose, mouth, ears and even eyes. To claim that there is no evidence for blow hole evolution is plain silly, as PZ Myers showed. Were all the changes solely because of selective pressures? Let me ask Keith, do you accept the evidence for the evolution of the location of the blowhole, the evolution of the middle ear as so well documented by science or do you also reject these factual data? I am curious as to where your objections are located.

Its a fairy tale.

It's better described by a 'strawman'

Jeez even the wikipedia site knows this.

You do know that while Wikipedia is a good source for information, there is more scientific data outside wikipedia that deals with the less obvious aspects? Surely Keith has no excuse not being familiar with evolutionary theory given the presence of Dennis Anderson's website at the OK Community College?

PvM · 16 March 2008

The tree of life is a bush, not a tree and its upsidedown with almost all major taxa, etc. bursting into full fruition folowed by stasis, extinction, and minor variation within narrow vertical limits.

You have shown you can cut and paste but can you defend or even explain the relevance of your statement? Is the bush/tree upside down? Of course not, after all major taxa do arise before the species arise by the nature of the Lynnaean system. Any species will have to belong to a higher taxa, including a phylum. Yes, quite a few phyla arose during a few million years although most of them looked quite alike, causing quite a bit of confusion in recognizing fossils, and leading to an interesting over inflation of the number of 'phyla' until a closer look revealed the true story. See this PLOS paper for some interesting details about bush versus tree. What is such a big deal about the tree of life being a bush or a tree? We see stasis, we see gradual evolution, we see more abrupt evolution and we see extinction. What we do not see however is minor variation within very narrow vertical limits. That is a misrepresentation of fact.

David Stanton · 16 March 2008

Like I said, Keith just doesn't understand the tree of life. Whether it is best described as a bush or a tree, his assertations about no forms other that those in the direct line of descent are ridiculous. So which is it Keith, there are no transitional forms or there are not enough forms that are not transitional? What about those equine lineages Keith?

So, you admit that neanderthals were an unsuccessful hominid lineage. So I guess you will quite whining about nothing that is not in the direct line of descent going extinct due to deleterious mutations now.

As for the blowhole, (the whale's not Keith's), the evidence shows that it did migrate to the top of the skull in response to selection pressure. To try to argue that it could not is like arguing that a bumblebee cannot fly. Try again.

Now about those random processes that Keith claimed were so unpredictable, if you dissolve a dye crystal in a beaker of water the molecules will move randomly. Can you predict the outcome Keith? If not you do not understand diffusion. If so, once again, your claim is falsified.

PvM · 16 March 2008

Perhaps Keith is confused by how phylogenetic trees are represented by straight lines and believes that this indicate limited variation.

PvM · 16 March 2008

Let's explore the bush metaphor which was cut-and-pasted by our friend Keith Eaton. Is the tree of life really a bush?

The answer is because the Cambrian "bush" metaphor is essentially an arthropod phenomenon. Gould could not have made the same case if he had chosen to discuss, for example, brachiopods, molluscs or chordates: These groups achieved their peaks of diversity respectively in the Devonian, Cretaceous and Carboniferous.

"Morphometric and phylogenetic studies have shown that the supposedly ‘bizarre’ Burgess Shale-type arthropods fall into a phylogenetic scheme that gives no support to the idea that they are outliers in morphospace awaiting the grim reaper of contingent extinction" (Conway Morris 2000, p. 4428).

Understanding concepts such as diversity and disparity may be helpful for Keith to appreciate what the data do and do not show. Limited variation... Only in the minds of creationists really

Keith Eaton · 16 March 2008

Now I can add Stanton to the list of math ignorant morons along with ithc.

Can you predict how long the diffusion will require until the number of red dye molecules is precisely the same per unit of volume? What if the red dye molecules are distinguishable (like the sequences of the four letter DNA code molecules)? Are you going to predict the location of the red dye molecules one by one at each instant of time and then at equibrium as well? And for sure the instant case deals with the meaning and functional outcome of precise distinguishable molecular object locational changes.

The question was are mutations considered random in evolution?

http://evolution.berkeley.edu/evolibrary/article/0_0_0/mutations_07

Mutations are random

Mutations can be beneficial, neutral, or harmful for the organism, but mutations do not "try" to supply what the organism "needs." Factors in the environment may influence the rate of mutation but are not generally thought to influence the direction of mutation. For example, exposure to harmful chemicals may increase the mutation rate, but will not cause more mutations that make the organism resistant to those chemicals. In this respect, mutations are random — whether a particular mutation happens or not is unrelated to how useful that mutation would be.
For example, in the U.S. where people have access to shampoos with chemicals that kill lice, we have a lot of lice that are resistant to those chemicals. There are two possible explanations for this:

Hypothesis A: Hypothesis B:

Resistant strains of lice were always there — and are just more frequent now because all the non-resistant lice died a sudsy death. Exposure to lice shampoo actually caused mutations for resistance to the shampoo.

Scientists generally think that the first explanation is the right one and that directed mutations, the second possible explanation relying on non-random mutation, is not correct.

Researchers have performed many experiments in this area. Though results can be interpreted in several ways, none unambiguously support directed mutation. Nevertheless, scientists are still doing research that provides evidence relevant to this issue.

In addition, experiments have made it clear that many mutations are in fact random, and did not occur because the organism was placed in a situation where the mutation would be useful. For example, if you expose bacteria to an antibiotic, you will likely observe an increased prevalence of antibiotic resistance. Esther and Joshua Lederberg determined that many of these mutations for antibiotic resistance existed in the population even before the population was exposed to the antibiotic — and that exposure to the antibiotic did not cause those new resistant mutants to appear.

The Lederberg experiment
In 1952, Esther and Joshua Lederberg performed an experiment that helped show that many mutations are random, not directed. In this experiment, they capitalized on the ease with which bacteria can be grown and maintained. Bacteria grow into isolated colonies on plates. These colonies can be reproduced from an original plate to new plates by "stamping" the original plate with a cloth and then stamping empty plates with the same cloth. Bacteria from each colony are picked up on the cloth and then deposited on the new plates by the cloth.

Esther and Joshua hypothesized that antibiotic resistant strains of bacteria surviving an application of antibiotics had the resistance before their exposure to the antibiotics, not as a result of the exposure. Their experimental set-up is summarized below:

1. Bacteria are spread out on a plate, called the "original plate."
2. They are allowed to grow into several different colonies.
3. This layout of colonies is stamped from the original plate onto a new plate that contains the antibiotic penicillin.
4. Colonies X and Y on the stamped plate survive. They must carry a mutation for penicillin resistance.
5. The Lederbergs set out to answer the question, "did the colonies on the new plate evolve antibiotic resistance because they were exposed to penicillin?" The answer is no:
When the original plate is washed with penicillin, the same colonies (those in position X and Y) live — even though these colonies on the original plate have never encountered penicillin before.

So the penicillin-resistant bacteria were there in the population before they encountered penicillin. They did not evolve resistance in response to exposure to the antibiotic.

But what do those Berkeley guys know compared to you buttheads? HA!

And for the idiot comment that if a variable has a probability distribution its not random.

Wikipedia:

Broadly, a random variable is defined as a quantity whose values are random and to which a probability distribution is assigned.

Britannica Concise Encyclopedia: random variable

In statistics, a function that can take on either a finite number of values, each with an associated probability, or an infinite number of values, whose probabilities are summarized by a density function.

http://www.stats.gla.ac.uk/steps/glossary/probability_distributions.html

A random variable has either an associated probability distribution (discrete random variable) or probability density function (continuous random variable).

I knew evos were math ignorant but this level of stupidity is frightening.

I have to hit the hay now, but I'll be pleased to pistol whip your butts some more tomorrow if you like.

Oh and let's set up PAYPAL for me to bet you 100 bucks you can't predict the precise number of heads in a fair coin flip series of 100 flips. And it is a binomial distribution.. no problem right?

Let me know when you want to get started dodo.

snaxalotl · 16 March 2008

"... inner ears and jaws are completely different ... any fossils in this transition MUST show the middle ear / jaw changing as well"

strictly speaking, this isn't true. while this particular transition must occur across many species of the reptile-mammal transition, it doesn't necessarily span the entire transition (i.e. components of the reptile-mammal transition don't need to all evolve at the same rate, or start/finish in the same species). therefore (insofar as the logic of the quote is concerned) an ancestor/descendant pair with no middle ear transition wouldn't disprove the evolutionary transition between reptiles and mammals

PvM · 16 March 2008

The question was are mutations considered random in evolution?

Not really, the question was is evolution random. You seemed to suggest that this was the case and yet, a random process combined with a regular process (selection) makes evolution non random. But congratulations, you can use Wikipedia and Google, now put your gained knowledge to some good use. Hope that clarifies a common confusion amongst Creationists. As to the tree of life, Gould's portrayal of the Cambrian period has been unfortunately used by ID creationists to further their erroneous interpretation of the Cambrian. Yes, Gould was wrong...

The combination of important refinements in the treatment of the systematics of Cambrian fossils, and in our understanding of Cambrian stratigraphy is leading to a more precise view of the Cambrian explosion. Phyla do not appear in a sudden jumble, implying an appearance in the fossil record induced by some external influence (e.g., a rise in atmospheric oxygen levels) that allowed a standing diversity already present to be manifested in the record. Rather, the impression rather is of a rapid, but nevertheless resolvable and orderly appearance, starting with the earliest skeletal forms such as Cloudina that are reasonably assignable to a diploblast grade (i.e., stem- or crown-group cnidarians or basal stem-group bilaterians). These are followed by taxa that lie in basal positions within bilaterian clades, and (in general) considerably later by representatives of the crown-groups of phyla. Revisions to the Cambrian time-scale allow a moderately long period of time, some tens of millions of years, between the first likely bilaterian trace fossils, and the general appearance of crown-group members of the phyla.

Graham E. Budd, The Cambrian Fossil Record and the Origin of the Phyla Integrative and Comparative Biology 2003 43(1):157-165 Similarly we read

It has long been assumed that the extant bilaterian phyla generally have their origin in the Cambrian explosion, when they appear in an essentially modern form. Both these assumptions are questionable. A strict application of stem- and crown-group concepts to phyla shows that although the branching points of many clades may have occurred in the Early Cambrian or before, the appearance of the modern body plans was in most cases later: very few bilaterian phyla sensu stricto have demonstrable representatives in the earliest Cambrian. Given that the early branching points of major clades is an inevitable result of the geometry of clade diversification, the alleged phenomenon of phyla appearing early and remaining morphologically static is seen not to require particular explanation. Confusion in the definition of a phylum has thus led to attempts to explain (especially from a developmental perspective) a feature that is partly inevitable, partly illusory. We critically discuss models for Proterozoic diversification based on small body size, limited developmental capacity and poor preservation and cryptic habits, and show that the prospect of lineage diversification occurring early in the Proterozoic can be seen to be unlikely on grounds of both parsimony and functional morphology. Indeed, the combination of the body and trace fossil record demonstrates a progressive diversification through the end of the Proterozoic well into the Cambrian and beyond, a picture consistent with body plans being assembled during this time. Body-plan characters are likely to have been acquired monophyletically in the history of the bilaterians, and a model explaining the diversity in just one of them, the coelom, is presented. This analysis points to the requirement for a careful application of systematic methodology before explanations are sought for alleged patterns of constraint and flexibility.

GRAHAM E. BUDD and SÖREN JENSEN A critical reappraisal of the fossil record of the bilaterian phyla, Biological Reviews (2000), 75: 253-295 Hope this clarifies the overly simplistic 'it's a bush not a tree' and 'abrupt, simultaneous' and 'limited variations'.

prof weird · 17 March 2008

Keith Eaton doth vomit upon the board with :

Now I can add Stanton to the list of math ignorant morons along with ithc.

Can you predict how long the diffusion will require until the number of red dye molecules is precisely the same per unit of volume? What if the red dye molecules are distinguishable (like the sequences of the four letter DNA code molecules)?

Selection is NOT random, twit.

For a POPULATION of organisms, some will be more effective at living long enough to reproduce than others. Their DNA sequences become more and more common in later generations. If you are unable or unwilling to understand such a simple concept, you really shouldn't be posturing like you know anything about evolution. Or science in general.


Are you going to predict the location of the red dye molecules one by one at each instant of time and then at equibrium as well? And for sure the instant case deals with the meaning and functional outcome of precise distinguishable molecular object locational changes.

Good thing that, IN REALITY, selection is not random. Those organisms with variations that enable them to live long enough to reproduce more effectively than other sequences tend to become more common.


The question was are mutations considered random in evolution?

http://evolution.berkeley.edu/evolibrary/article/0…

Mutations are random

Mutations can be beneficial, neutral, or harmful for the organism, but mutations do not “try” to supply what the organism “needs.” Factors in the environment may influence the rate of mutation but are not generally thought to influence the direction of mutation. For example, exposure to harmful chemicals may increase the mutation rate, but will not cause more mutations that make the organism resistant to those chemicals. In this respect, mutations are random — whether a particular mutation happens or not is unrelated to how useful that mutation would be. For example, in the U.S. where people have access to shampoos with chemicals that kill lice, we have a lot of lice that are resistant to those chemicals. There are two possible explanations for this:

Hypothesis A: Hypothesis B: Resistant strains of lice were always there — and are just more frequent now because all the non-resistant lice died a sudsy death. Exposure to lice shampoo actually caused mutations for resistance to the shampoo.

Scientists generally think that the first explanation is the right one and that directed mutations, the second possible explanation relying on non-random mutation, is not correct.

And this is relevant to your plaintive bleatings HOW ?

No one - except the strawmen lurking in that fetid lump of grease you call your mind and gibbering creationuts, IDiots and theoloons - claim that organisms can 'will' any given mutation into existence when they need it.

Mutations are random with respect to need - whether they are neutral, deleterious, or beneficial depends on environmental context. In fact, your OWN bleatings will back up this point, revealing you are confused about evolution (amongst other things).


Researchers have performed many experiments in this area. Though results can be interpreted in several ways, none unambiguously support directed mutation. Nevertheless, scientists are still doing research that provides evidence relevant to this issue.

You seem to have problems with reading comprehension - NONE of what you said so far supports your gibberings. In fact, it contradicts it - but you are too slackwitted to know that, apparently.


In addition, experiments have made it clear that many mutations are in fact random, and did not occur because the organism was placed in a situation where the mutation would be useful. For example, if you expose bacteria to an antibiotic, you will likely observe an increased prevalence of antibiotic resistance. Esther and Joshua Lederberg determined that many of these mutations for antibiotic resistance existed in the population even before the population was exposed to the antibiotic — and that exposure to the antibiotic did not cause those new resistant mutants to appear.

The Lederberg experiment In 1952, Esther and Joshua Lederberg performed an experiment that helped show that many mutations are random, not directed. In this experiment, they capitalized on the ease with which bacteria can be grown and maintained. Bacteria grow into isolated colonies on plates. These colonies can be reproduced from an original plate to new plates by “stamping” the original plate with a cloth and then stamping empty plates with the same cloth. Bacteria from each colony are picked up on the cloth and then deposited on the new plates by the cloth.

Esther and Joshua hypothesized that antibiotic resistant strains of bacteria surviving an application of antibiotics had the resistance before their exposure to the antibiotics, not as a result of the exposure. Their experimental set-up is summarized below:

1. Bacteria are spread out on a plate, called the “original plate.” 2. They are allowed to grow into several different colonies. 3. This layout of colonies is stamped from the original plate onto a new plate that contains the antibiotic penicillin. 4. Colonies X and Y on the stamped plate survive. They must carry a mutation for penicillin resistance. 5. The Lederbergs set out to answer the question, “did the colonies on the new plate evolve antibiotic resistance because they were exposed to penicillin?” The answer is no: When the original plate is washed with penicillin, the same colonies (those in position X and Y) live — even though these colonies on the original plate have never encountered penicillin before.

So the penicillin-resistant bacteria were there in the population before they encountered penicillin. They did not evolve resistance in response to exposure to the antibiotic.

They were there at VERY LOW LEVELS until the ENVIRONMENT CHANGED, giving those VARIANTS a SELECTIVE ADVANTAGE relative to the unmutated bacteria.

No one - except the strawmen wandering around in that vast emptiness of your skull - actually claimed that the bacteria evolved the resistance AT NEED.

NONE of what you've posted supports your impotent ragings against evolution.


But what do those Berkeley guys know compared to you buttheads? HA!

We know what they know, since they provided the EVIDENCE that mutations are random WITH RESPECT TO NEED. You are trying to make something known to SUPPORT evolution for fifty years contradict evolution !


And for the idiot comment that if a variable has a probability distribution its not random.

Wikipedia:

Broadly, a random variable is defined as a quantity whose values are random and to which a probability distribution is assigned.

Britannica Concise Encyclopedia: random variable

In statistics, a function that can take on either a finite number of values, each with an associated probability, or an infinite number of values, whose probabilities are summarized by a density function.

http://www.stats.gla.ac.uk/steps/glossary/probabil…

A random variable has either an associated probability distribution (discrete random variable) or probability density function (continuous random variable).

I knew evos were math ignorant but this level of stupidity is frightening.

Yes, your level of willful stupidity IS quite frightening.

Selection is not random - certain phenotypes are more likely to live long enough to reproduce than others. Those variants become more common. Thus a 'direction' manifests, and so evolution can make retrodictions (if evolution happened the way we think it did, we PREDICT we'll find organisms with certain features in rocks of a particular age.) Tiktaalik was a successful PREDICTION of evolutionary theory.

Initiating empty, vainglorious posturing :


I have to hit the hay now, but I’ll be pleased to pistol whip your butts some more tomorrow if you like.

With what ? More willful stupidity ? More festering arrogance and belligerent pomposity ? More references that show your bleatings are wrong ?


Oh and let’s set up PAYPAL for me to bet you 100 bucks you can’t predict the precise number of heads in a fair coin flip series of 100 flips. And it is a binomial distribution.. no problem right?

Why is the PRECISE number required, twit ?

With a fair coin, there should be 50 heads, +/- a small bit due to the random chance.

In fact, if the numbers were way off, that would mean that one outcome is more favored than the other - kind of what SELECTION does with genomic variation !

Ichthyic · 17 March 2008

And for the idiot comment that if a variable has a probability distribution its not random.

hello?

who said that?

if you mean me, I never said that.

here's an example of how you are wrong, yet again, and shouldn't rely on your google fu skills to substitute for a course in probability and statistics:

Oh and let’s set up PAYPAL for me to bet you 100 bucks you can’t predict the precise number of heads in a fair coin flip series of 100 flips. And it is a binomial distribution.. no problem right?

If i thought you actually would pay up, I'd take you up on that.

the answer is that there is an equal probability it will be either heads or tails, all else being controlled for.

it's not the EXACT FUCKING NUMBER that's important, it's the PROBABILITY of any given number occuring.

hence the term: Probability distribution.

in your example of the coin toss, the binomial distribution shows what the probability is that you will get a head or a tail on any given toss, not whether or not it will be heads or tails on toss number "x", which is totally irrelevant.

sweet jesus, for someone who wants to play "math wiz" you're even worse at playing "statistics wiz".

seriously, google is no substitute for a proper education.

btw, there are many types of mutations that can occur within a given genome, and none of them are entirely randomly distributed. Point mutations in any given chromose are more likely to be of one type than another, and each type is more likely to occur in some places on a DNA strand than others. This is simply based on the fact that there is a chemical structure to DNA, which has an effect on what happens when a mutagenic factor is introduced. And I'm just talking point mutations here, translocation, excision, insertion events... all have different probability curves, entirely dependent on the circumstances.

Which, as others pointed out, also has absolutely nothing to do with selection on the variation resulting from any given mutation event or series of events. Selection is hardly random, as even a moment of thought given to any specific example would have told you.

Explaining evolution as "RM + NS" is about the level we try to explain it to 3rd graders, who of course haven't the slightest clue what statistics even means.

funny, you even failed at the 3rd grade level of understanding.

but you can't even give a moment of thought to it, of course, which continues to make me wonder why I, or anybody else, even bothers to respond to you.

frankly, I'm done. You're little more than an obtuse moron, pretending to be intelligent and failing miserably.

Pim can have fun allowing you to spew your idiocy over and over again all he wishes.

Peter Henderson · 17 March 2008

I know that some creationists think that neanderthals were completely human, however, they are completely wrong. Neanderthals were very distinct morphologically, culturally and genetically. The genetic evidence clearly indicates that they were not humans. I can provide references if you wish. The best hypothesis based on current evidence is that they are an extinct sister group to homo sapiens that may or may not have made a slight genetic contribution to the modern human gene pool.

I do realise this David and the reasons for them becoming extinct is certainly cause for much speculation. They do appear to have been cold adapted and the rise in temperature would have favoured homo sapiens rather than them (neanderthals). Interestingly, in a BBC programme on the subject a few years ago make-up experts transformed TV presenter Alan Titchmarsh into what they thought a neanderthal would look like. While a few passers by did stare at his slightly unusual appearance, most just ignored him. The point being made was that neanderthals did not look that different from modern humans. Still, I've heard so many YEC's with similar ideas to Keith's that it's obvious he's been reading a lot of AiG material. DonExodus' videos are really good. I've had a look at some of his others as well and I agree wholeheartedly about his sentiments as to why the YEC's are damaging the church. However, I just wonder how Don would fare against a seasoned (and well educated) professional creationist such as Dr. David Menton. Menton sets himself up as AiG's expert on such things as transitional fossils and in particular the hominid lineage (check out his video "Lucy she's no lady" on the AiG website) Menton and Ham will both be here in Belfast on the 9th May and will address thousands, most of whom do not have advanced degrees in any science subject, let alone biology. Most (if not all) of the audience will sit in awe of what is being said and completely ignorant of why it is wrong. Menton's subjects in Belfast by the way are "the hearing ear the seeing eye" and "fearfully and wonderfully made"

jacob · 17 March 2008

How does the blow-hole migrate from just below the eyes to just above the eyes and then to the top of the head. Would not having a nostril in between the eyes be a distinct survival disadvantage? It has to happen in gradual steps correct?

Blaidd Drwg · 17 March 2008

A thought on probability:

A few months ago I conducted a time study at work. I had a stopwatch, that measured hundredths-of-a-second accuracy. I would start the stopwatch when the operator picked up a workpiece, and stop it when the operator finished the task, and put the piece on the conveyor, and then recorded the time it took to complete the job. Each time I recorded the time, I woud clear the stopwatch, and I did not look at the display until I had stopped the watch when the operator finished the job (thus the decimal display was essentially random in the hundredths place). The probability of seeing a display of XX.00 seconds given those conditions is 1:100. (The overall cyle time was on the close order of 60 seconds)
The probability of seeing XX.00 twice in a row under these conditions is 1:10,000, yet I saw that result in less than 45 iterations. Creationist 'math' would predict that this result would not occur for nearly 7 days of continuous trials, if this was a desired result.

As my Statistics professor used to say: "Probability is a great way of going wrong with confidence".

Richard Simons · 17 March 2008

Peter Henderson said: Interestingly, in a BBC programme on the subject a few years ago make-up experts transformed TV presenter Alan Titchmarsh into what they thought a neanderthal would look like. While a few passers by did stare at his slightly unusual appearance, most just ignored him.
How meaningful this is depends on where he did it. When I was in Cambridge (UK) someone said he had happened to be walking in the (very busy) town centre for about 1/4 mile behind someone who was wearing sandals, a wristwatch and nothing else, and no-one took a second glance at him. ;)

David Stanton · 17 March 2008

Keith,

Now I know for sure that you are just an ingorant troll who has no decency at all.

Your claim was that one cannot make any predictions if events are random. However, if you dissolve a dye crystal in a beaker of water the random motion of the molecules will create an even distribution of dye molecules. The result is absolutely predictable and the rate at which this state will be achieved is dependent on the temperature of the water and the molecular weight of the dye. Don't try to confuse the issue by demanding all sorts details that are irrelevant. The prediction can be made and tested, period.

Of course, the exact same thing goes for evolution as well. We can predict the outcome of genetic drift which is due to random processes. We might not be able to predict the exact outcome in every subpopulation, but we can make meaningful predictions.

Now Keith can go on demanding that we make ever more specific predictions until he is satisfied, but who cares? As was already pointed out, evolution is not random. And as for demanding more details, still no response about the horses or the neanderthals Keith? You were just plain wrong and you know it. You are the one who you are pistol-whipping.

Dave Lovell · 17 March 2008

Blaidd Drwg: A thought on probability: The probability of seeing XX.00 twice in a row under these conditions is 1:10,000, yet I saw that result in less than 45 iterations. Creationist 'math' would predict that this result would not occur for nearly 7 days of continuous trials, if this was a desired result.
Why not use a more amazing everyday example. The chances of picking all the balls in the Lottery are about 14,000,000:1, but someone has done it almost every week for the last fourteen years.

Jon Fleming · 17 March 2008

The copying errors in DNA are best described as from a uniform distribution without any bias.

In reality, copying errors in DNA are not at all describable as from a uniform distribution without any bias.

noncarborundum · 17 March 2008

jacob said: How does the blow-hole migrate from just below the eyes to just above the eyes and then to the top of the head. Would not having a nostril in between the eyes be a distinct survival disadvantage? It has to happen in gradual steps correct?
Given that the whale's eyes are on the sides of its head, where exactly is this "between" you speak of, and why would it be a distinct disadvantage to have a nostril there?

PvM · 17 March 2008

Keith's self study on the topic of randomness has been moved to the bathroom wall.

PvM · 17 March 2008

Jon Fleming:

The copying errors in DNA are best described as from a uniform distribution without any bias.

In reality, copying errors in DNA are not at all describable as from a uniform distribution without any bias.
Details, details... Let Keith first familiarize himself with statistics 101 before troubling him with these 'confusing details'.

David Stanton · 17 March 2008

Well, I don't believe it. Keith actually got something right. I guess when your opinions are random it is bound to happen eventually. In this case Keith actually presented real evidence that mutations are random with respect to the needs of the organism. As others have pointed out, this is exactly correct. Now why he thinks that this is somehow a problem for evolutionary theory I don't know. Maybe he can enlighten realPC the next time he shows up here spouting unsubstantiated nonsense. See, no guiding force, no intelligence involved, no evidence of anything but mindless random processes.

Now, if mutations are random with respect to need, then inevitably some of them will be beneficial, some of these will not be eliminated by drift and some of them will increase in frequency due to selection. What could possibly prevent this from occurring? And as we have already seen, the fact that random processes are involved in no way prevents us from making useful predictions. That is in fact how the entire field of population genetics came to be so successful.

So Keith, if you can't accurately predict the position of every electron in every atom of water, does that mean that you can't predict when if will freeze or boil? If the cards are dealt randomly, does every poker player have an equal probability of winning a tournament? Enquiring minds want to know.

Now, about those horses. There were at least ten different lineages that branched from the lineage leading to modern horses that went extinct. Since they were not in the direct line of descent that lead to horses, by definition they were not transitional, they were however intermediate. That is the way that the tree of life works. Maybe some day Keith will understand the tree of life, maybe not. In any event, you can't have it both ways. If there are transitional forms there are intermediate forms as well, even if they have not yet been discovered. Demanding a certain ratio of intermediate to transitional forms is just plain silly. Of well, at least it beats the old "there are no transitional forms" routine.

PvM · 17 March 2008

In this case Keith actually presented real evidence that mutations are random with respect to the needs of the organism. As others have pointed out, this is exactly correct.

I think Keith believes that since mutations are random, evolution which includes variation (caused by many mechanisms) should be random as well, even though there is an overlooked component of selection which is not random. An example of a random process followed by a non-random process is the game of Bridge. The cards are shuffled and distributed 'randomly', the outcome of the game however is non-random.

Bill Gascoyne · 17 March 2008

"A highbrow is a person educated beyond his intelligence."

James Brander Matthews

Mike Elzinga · 17 March 2008

I anticipate additional opportunities to enlighten you in a countably infinite number of areas.
Most people posting here prefer to get their information from sources that go beyond the level of the integers.

David Stanton · 17 March 2008

Keith,

No one has agreed with any of you arguments and I doubt anyone ever will.

Your claim that extinct species cannot be intermediate confirms that you simply do not understand the tree of life.

I have asked three time about the horses, I will not ask again. Until you respond I will ignore anything else you write and I suggest others do the same.

PvM · 17 March 2008

Keith's 'contributions' can be found on the more appropriate bathroom wall.

Keith Eaton · 17 March 2008

Typical of the loser evos to essentially ban those who intellectually pistol whip them into jelly.

I win you lose.

PvM · 17 March 2008

Typical of the loser evos to essentially ban those who intellectually pistol whip them into jelly. I win you lose.

You have not been banned, some of your comments were moved. When you have an argument to contribute then please do so, otherwise, a more suitable place is available.

trrll · 17 March 2008

Evolution makes no predictions by definition. It is an uncaring molecular process driven by random mutations and ratcheted by additional random processes, called selective pressures. Weather, climate, predation, disease, accidents, catastrophes and floods are all dominated by randomness and thus two concatenated random processes cannot predict anything.
If random processes were completely unpredictable, then casinos would go broke. I mean, like, duh.

Torbjörn Larsson, OM · 17 March 2008

thus two concatenated random processes cannot predict anything.
Damn, there goes Kalman filters or anything else based on Markov chains. I guess autopilots are based on wishful thinking then. Oh, and I wouldn't know, but they tell me so is some weather forecasting.

Dale Husband · 17 March 2008

Keith Eaton: Typical of the loser evos to essentially ban those who intellectually pistol whip them into jelly. I win you lose.
Sounds like a five year old on a pre-school playground. When you have a real argument, please present it.

Henry J · 17 March 2008

If random processes were completely unpredictable, then casinos would go broke.

And insurance companies. Henry

Whit · 17 March 2008

slang: I liked it.. but then at 6:15ish it says "needs to develop" and then "the fossil record clearly shows all of these being developed". You know that it will be parsed by some as "Oh? How did that fish KNOW it had to develop waterproof skin to become a reptile? Well? See!? You can't answer that!!".
Very true,- I was referring to needed to in the sense of hindsight- ie "to get where it is today, it needs to develop legs." Good catch though. Check out my creationism dishonesty vid too :P http://www.youtube.com/watch?v=FoZW7-3YSns&feature=PlayList&p=6818DF8C6AB4A0DF&index=0&playnext=1 My next one is on whale evolution, and will heavily focus in the middle ear transition, with full citations from pubmed. Regards, Whit (DonExodus)

Whit · 18 March 2008

Why not use a more amazing everyday example. The chances of picking all the balls in the Lottery are about 14,000,000:1, but someone has done it almost every week for the last fourteen years.
Fire a BB at the Earth from the Moon (pretend it wont burn up). What are the odds that it would strike in one particular place? Virtually 0. Yet, it has to hit somewhere, and those near 0's add up to 1.

Whit · 18 March 2008

However, I just wonder how Don would fare against a seasoned (and well educated) professional creationist such as Dr. David Menton.
Dr. Jonathan Sarfati joined a facebook group I was in, and tried to do what he does. He ended the discussion with "I dont have to answer you anymore", and "I have a PhD, and you dont". When I asked him what his PhD was in, he said "look it up yourself". Yes, this is the real Sarfati.

PvM · 18 March 2008

Have you checked out what a dolphin looks like for instance?
jacob: How does the blow-hole migrate from just below the eyes to just above the eyes and then to the top of the head. Would not having a nostril in between the eyes be a distinct survival disadvantage? It has to happen in gradual steps correct?
Or the blowhole of the Right whale

David Stanton · 18 March 2008

Of course intermediate forms can be extinct, just watch the video. That's like saying that if all your cousins and nieces and nephews are not still alive, you can't exist!

Still, your cousins, nieces and nephews might still be alive. That doesn't mean that they aren't related to you. For example, the phylum Onychophora is intermediate between annelids and arthropods both morphologically and genetically. There are still some velvet worms in Jamaica and a few other places. And this is only one example out of many.

Now some people come here to make nonsensical arguments, refuse to answer questions, babble so incoherently that their nonsense is moved to TBW, (no small feat given the incredible patience of PvM), then amazingly delcare victory and run away. And all of this without ever even taking the time to look at the videos that were supposed to be the topic of the thread.

Keep up the good work Whit. Some of us enjoyed the videos.

Dean Wentworth · 18 March 2008

Sperm whale blowholes are located left of center. So Keith, will you now contend that sperm whales don't exist?

Stanton · 18 March 2008

David Stanton: Still, your cousins, nieces and nephews might still be alive. That doesn't mean that they aren't related to you. For example, the phylum Onychophora is intermediate between annelids and arthropods both morphologically and genetically. There are still some velvet worms in Jamaica and a few other places. And this is only one example out of many.
Actually, the idea that velvet worms are an intermediate form between annelids and arthropods has become defunct, as recent genetic analysis between various chitin-producing animals, including annelids, arthropods, onychophorans, nematodes, and molluscs shows that arthropods, onychophorans + water bears, and nematodes form a clade "Ecdysozoa," because they all share a suite of genes that regulate molting of the exoskeleton/outer cuticle, whereas annelids, molluscs, and brachiopods and friends form a possible sister clade to Ecdysozoa, "Lophotrochozoa," on account of how all of them share similar Hox genes, and that they have a "trochophore" larval form.

Henry J · 18 March 2008

The tolweb page http://tolweb.org/Bilateria/2459 puts velvet worms (and water bears) on a branch as sibling groups to arthopods.

jacob · 18 March 2008

Keith Eaton: Evolution makes no predictions by definition. It is an uncaring molecular process driven by random mutations and ratcheted by additional random processes, called selective pressures. Weather, climate, predation, disease, accidents, catastrophes and floods are all dominated by randomness and thus two concatenated random processes cannot predict anything. Evolution curve fits observations over intervals by adding such variables as may be necessary to connect the dots, much like a multivariate regression where with enough variables invented any continuous curve cab be approximated over a short interval of outcomes. And since mutational effects are 99% harmful or useless even when expressed there should be millions of fossils that do fit any series such as so called whale evolution where the blowhoile apparatus supposedly evolved as teh nose moved steadily backward on teh head to the top. But where are all the blowholes or noses moving in any other of the 359 degree directions, there should be many with nostrils moving sideways, down at all angles, after all successive mutational expressions don't care. It's true only those that proved "beneficial" would persist, but that does not excuse the absense of failed expressions that would be 100/1 in evidence. This is of course the case in all other so called transitional series where every fossil is perfect fit in the series....how convenient...anbd impossible. Evolution the science for the committed myopic community.
Yes Kevin. Excellent. Yes there should be some sort of random walk towards the end product. We should seed dogs with 3 ears. Why not? A neutral mutation! Various numbers of toes. Nostrils in various positions. The reason as you know that they are all so perfectly in a series is that they have been selected that way and arranged that way. Why would a nostril 2 inches from the tip of the nose be such an advantage to survival fomr one this is 1.5 inches from the tip?

jacob · 18 March 2008

David Stanton: Like I said, Keith just doesn't understand the tree of life. Whether it is best described as a bush or a tree, his assertations about no forms other that those in the direct line of descent are ridiculous. So which is it Keith, there are no transitional forms or there are not enough forms that are not transitional? What about those equine lineages Keith? So, you admit that neanderthals were an unsuccessful hominid lineage. So I guess you will quite whining about nothing that is not in the direct line of descent going extinct due to deleterious mutations now. As for the blowhole, (the whale's not Keith's), the evidence shows that it did migrate to the top of the skull in response to selection pressure. To try to argue that it could not is like arguing that a bumblebee cannot fly. Try again. Now about those random processes that Keith claimed were so unpredictable, if you dissolve a dye crystal in a beaker of water the molecules will move randomly. Can you predict the outcome Keith? If not you do not understand diffusion. If so, once again, your claim is falsified.
I don't you understand the nasal drift situation. The progression would have to an advantage EVERY STEP OF THE WAY. And all those with nostrils near the tip would have to be wiped out by those more toward the center. Why would that happen?

David Stanton · 18 March 2008

I don' think you understand, it did happen. As to why, it was obviously advantageous and thus subject to selection. Why couldn' t it have an advantage every step of the way? Why couldn't every progressive change be more and more beneficial? Why couldn't it change in small increments if that is the most likely route given genetic and developmental constraints? Have you ever watched a whale come up for air? The closer the blowhole is to the top of the head the easier it is, the less drag on the body, the less slowing down, the less danger of predation from killer whales or even humans. Look at the fossils, that is exactly what happened.

Of course it didn't have to happen in a straight sequence. Of course other mutations could arise, they would simply be selected against. For example, some whales are still born with external hind limbs. They don't tend to do so well however so the whales without hind limbs predominate.

jacob · 18 March 2008

noncarborundum:
jacob said: How does the blow-hole migrate from just below the eyes to just above the eyes and then to the top of the head. Would not having a nostril in between the eyes be a distinct survival disadvantage? It has to happen in gradual steps correct?
Given that the whale's eyes are on the sides of its head, where exactly is this "between" you speak of, and why would it be a distinct disadvantage to have a nostril there?
Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip?

PvM · 18 March 2008

I don’t you understand the nasal drift situation. The progression would have to an advantage EVERY STEP OF THE WAY. And all those with nostrils near the tip would have to be wiped out by those more toward the center. Why would that happen?

Wiped out? Or just being less successful in reproduction?

Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip?

That depends on the morphology of the animal.

PvM · 18 March 2008

an interesting hypothesis

The changes in the ancestors of cetaceans are consistent with the morphology of modem day whales, dolphins, and porpoises. Modem cetaceans do not have common nostrils. The air hole has shifted over time through intermediates from the snout of the Mesonychid, to the blowhole of the common whale and dolphin. The position of the blowhole is thought to have come about due to the animals center of gravity. When the cetacean is slumbering, the snout is underwater and the back of the head/middle of the back lies just above the surface of the water. Thus, this area provides the most suitable position for the nasal passage duct. Natural selection acted to push the blowhole back because as the body size and shape changed through time, the buoyancy changes. If the nasal duct had remained at the front of the snout, a cetacean would have had to work harder in order to breathe.

Richard Simons · 18 March 2008

Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip?
It does not need to be overwhelming. Just a 1% better chance of surviving to produce offspring is enough for evolution to work.

jacob · 18 March 2008

PvM:

I don’t you understand the nasal drift situation. The progression would have to an advantage EVERY STEP OF THE WAY. And all those with nostrils near the tip would have to be wiped out by those more toward the center. Why would that happen?

Wiped out? Or just being less successful in reproduction?

Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip?

That depends on the morphology of the animal.
Well apparently wiped out since they are no longer around.

PvM · 18 March 2008

From Milan Klima Development of the Cetacean Nasal Skull 1999 Springer

The fact that the cetacean nose moved, in the course of evolution, from the tip of the rostrum up to the vertex of the head, is among the most perfect of adaptations to aquatic life. In this and many other special adaptations of their morphology and physiology, cetaceans surpass most primarily aquatic animals even though they themselves have developed from land mammals that breathe with lungs, and have only secondarily conquered the aquatic environment. To a certain extent, cetaceans can be considered to be the most successful group of aquatic animals of all time. Conclusive paleontological evidence shows the way in which the nasal openings were moved in the course of phylogeny (see Kellogg 1928; Slijper 1962; Gaskin 1976; Oelschlager 1978, 1987, 1990; Moore 1981). That this evolutionary process is repeated in a way during ontogeny became obvious through external observations on embryos and fetuses (Kukenthal 1893). At the earliest embryonic stages the nasal openings are still situated at the rostra tip like those of land mammals; they are gradually shifted more and more towards the vertex of the head at the older stages. At the same time, a long rost rum with narrow jaws develops. Until recently, practically nothing was known about the morphogenetic processes concealed in this metamorphosis, about what cranial structures take part in it, and about the exact way in which the cetacean skull becomes transformed during embryogeny.

PvM · 18 March 2008

Well apparently wiped out since they are no longer around.

Whiped out is a confusing term since it suggests an active process. Went extinct perhaps?

jacob · 18 March 2008

And if the nostril was just .25 inches towards the top of the head this would make a survival difference because the animal could sleep better? And those animals not getting the refreshing sleep would not be able to catch food as well?
And those with the 1/4 inch advantage would produce a difference in offspring that would drive the others out of the gene pool?

Sound fishy to me.

jacob · 18 March 2008

Richard Simons:
Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip?
It does not need to be overwhelming. Just a 1% better chance of surviving to produce offspring is enough for evolution to work.
I do not think 1% would make a diff. Got any proof?

jacob · 18 March 2008

PvM: From Milan Klima Development of the Cetacean Nasal Skull 1999 Springer

The fact that the cetacean nose moved, in the course of evolution, from the tip of the rostrum up to the vertex of the head, is among the most perfect of adaptations to aquatic life. In this and many other special adaptations of their morphology and physiology, cetaceans surpass most primarily aquatic animals even though they themselves have developed from land mammals that breathe with lungs, and have only secondarily conquered the aquatic environment. To a certain extent, cetaceans can be considered to be the most successful group of aquatic animals of all time. Conclusive paleontological evidence shows the way in which the nasal openings were moved in the course of phylogeny (see Kellogg 1928; Slijper 1962; Gaskin 1976; Oelschlager 1978, 1987, 1990; Moore 1981). That this evolutionary process is repeated in a way during ontogeny became obvious through external observations on embryos and fetuses (Kukenthal 1893). At the earliest embryonic stages the nasal openings are still situated at the rostra tip like those of land mammals; they are gradually shifted more and more towards the vertex of the head at the older stages. At the same time, a long rost rum with narrow jaws develops. Until recently, practically nothing was known about the morphogenetic processes concealed in this metamorphosis, about what cranial structures take part in it, and about the exact way in which the cetacean skull becomes transformed during embryogeny.

Would it not have been more efficient for a fish to evolve to take advantage of the food niche that whales used? Why didnt a fish evolve to that point. Ontogeny recapitulate phylogeny? How Haekel of you. Any proof? Does the human sequence of embryionic heart development recap phyolog? Conclusive? How many fossils between the land animal and whales? 10? And again why didnt a fish out compete the protowhales? They had a shorter route.

PvM · 18 March 2008

Sound fishy to me.

Repeat after me, a whale is not a fish.

Would it not have been more efficient for a fish to evolve to take advantage of the food niche that whales used? Why didnt a fish evolve to that point.

I have no idea what you have in mind here.

Ontogeny recapitulate phylogeny? How Haekel of you. Any proof?

Cetacean embryos. What's wrong with the idea that Haeckel was partially correct? Understanding evolutionary theory AND Haeckel can be quite beneficial

Modern biology rejects the literal and universal form of Haeckel's theory. Although humans are thought by scientists to share ancestors with many other taxa (roughly, fish through reptiles to mammals), stages of human embryonic development are not functionally equivalent to the adults of these shared common ancestors. In other words, no cleanly defined and functional "fish", "reptile" and "mammal" stages of human embryonal development can be discerned.

Source: Wikipedia

Does the human sequence of embryionic heart development recap phyolog?

Although this may have been believed in the past, as far as I can tell, embryological evidence does not support this. Certainly not at the 2, three and four chamber heart level. Why do you ask?

Conclusive? How many fossils between the land animal and whales? 10?

Define land animal and define whale. There is not a simple answer here. Where do whales start and land animals end.

And again why didnt a fish out compete the protowhales? They had a shorter route.

Different niches.

PvM · 18 March 2008

Enjoy these pictures from the Digital Library of Dolphin Development

David Stanton · 18 March 2008

Jacob,

In fact a 1% selection advantage would be quite adequate. Since selection is deterministic, there are equations that can be used to predict exaclty how many generation it would take for fixation. In any event, it doesn't matter since that is in fact what occurred.

As for fish not evolving similar adapatations, it would seem silly for a fish that already has gills to develop a less efficient mechanism for respiration. The whales need it since thy are mammals and must surface to breathe..

jacob · 18 March 2008

David Stanton: Jacob, In fact a 1% selection advantage would be quite adequate. Since selection is deterministic, there are equations that can be used to predict exaclty how many generation it would take for fixation. In any event, it doesn't matter since that is in fact what occurred. As for fish not evolving similar adapatations, it would seem silly for a fish that already has gills to develop a less efficient mechanism for respiration. The whales need it since thy are mammals and must surface to breathe..
"In any event, it doesn't matter since that is in fact what occurred." What occurred? You do not see your circular reasoning: You are saying whale evolution is possible because a 1% advantage would do it and you know a 1% advantage would do it since whales evolved. You really do not see the error in your logic? When did I say fish should get rid of their gills. Its the food source I am talking about.

jacob · 18 March 2008

And again why didnt a fish out compete the protowhales? They had a shorter route.

Different niches.

How do you know there were different niches?

jacob · 18 March 2008

David Stanton: In fact a 1% selection advantage would be quite adequate.
How do you know that 1% would be quite adequate?

jacob · 18 March 2008

""Repeat after me, a whale is not a fish.""

Repeat after me: I will read more carefully. I will read more carefully.

I never said a whale is a fish.

Shebardigan · 18 March 2008

jacob:
David Stanton: In fact a 1% selection advantage would be quite adequate.
How do you know that 1% would be quite adequate?
If you put $10.00 in a bank at 1% compound interest, for a hundred thousand years, what do you end up with?

PvM · 18 March 2008

jacob: And again why didnt a fish out compete the protowhales? They had a shorter route. Different niches. How do you know there were different niches?
Observation

PvM · 18 March 2008

So Jacob, you asked some good questions and now you have the supporting data that shows how the nostrils of a cetacean move from the snout to the top as evidenced both in the fossil record and embryological data.

Fascinating how evolutionary science seems to always find these 'coincidences' isn't it, and how annoying that they tend to support the scientific argument.
Of course, in addition to the nostrils many other aspects show a nice transition.

PvM · 18 March 2008

As to the evolution of the heart

The expanded cardiac field in Ets1/2-activated mutants results in a proportion of animals having a functional, two-chambered heart. "The conversion of a simple heart tube into a complex heart was discovered by chance, but has general implications for the evolutionary origins of animal diversity and complexity", says Mike Levine, a co-author of the paper.

See also Developmental biology: A change of heart by Helen Dell in Nature 443, 642 (12 October 2006) And Ciona intestinalis as a model for cardiac development by Brad Davidson Worth a posting by itself. Thanks for pointing out to me this minor evolutionary riddle.

Stanton · 18 March 2008

jacob: And again why didnt a fish out compete the protowhales? They had a shorter route. Different niches. How do you know there were different niches?
Among other things, there is no fossil evidence of a superior fish-eating fish that lived with the first fish-eating mesonychids and first protowhales, let alone one that could have out-competed the first fish-eating mesonychids or first protowhales during the Late Paleocene/Early Eocene. Thing is about wild speculations is that, if there is no evidence to support one's speculations, very few scientists, if any at all, will feel obligated to support them. And until we find fossil evidence of a superior fish-eating fish that lived with, and out-fished them into extinction, the current trends in paleontology will continue to state that the protowhales/pakicetids went extinct due to climatic changes, competition with later whales, and due to the Tethys Ocean closing up. Secondly, yes, different niches. All of the known large, fish-eating fishes that lived during the Late Paleocene/Early Eocene were either sharks, or large, tuna-sized relatives of tuna and swordfish, with both groups being open water predators, whereas the first protowhales/Pakicetids, were otter-like, hippo-like and crocodile-like predators that lived close to the shore, often in estuaries and marshes. Thus, different niches: "open-water fish eater" versus "shore-dwelling fish eater."

David Stanton · 18 March 2008

Jacob,

You are bercoming quite tiresome. Are you just arguing to argue or do you have some point you are trying to make?

Of course fish could have evolved to occupy the whale niches more efficiently than whales, but that is not what happened. There was no plan, there was no goal, there was no reason why whales or anything like them ever had to evolve, it is just what happened.

As for your assumption that a 1% selection differential is not enough to provide fixation, look up the equations yourself. I told you it was a deterministic process, if you don't believe me you do the math. There are plenty of examples of lower selection coefficients that have resulted in fixation.

As for my circular reasoning, you are just making things up now. I did not say that since whales evolved 1% selection has to be enough. What I said was that since whales obviously did evolve that the selection coefficient was obviously large enough to allow them to evolve. If you think that that is circular reasoning then you are the one going around in circles.

Now, do you admit that whales evolved from terrestrial ancestors or not? Do you admit that all of the developmental, palentological and genetic evidence supports this conclusion or not? If you do, quite arguing. If you don't, then you need to examine the evidence more closely. If you are not familiar with the evidence then go away until you are.

Stanton · 18 March 2008

David Stanton: Of course fish could have evolved to occupy the whale niches more efficiently than whales, but that is not what happened. There was no plan, there was no goal, there was no reason why whales or anything like them ever had to evolve, it is just what happened.
Beyond the fossil evidence suggesting that some mesonychids and other early semi-aquatic artiodactyls apparently had a big hankering for fish.

Shebardigan · 18 March 2008

David Stanton: Of course fish could have evolved to occupy the whale niches more efficiently than whales, but that is not what happened.
Actually, in the case of cetaceans and all the other cases of land animals recolonising the oceans, what you see is the result of fish evolving a more effective life style. They just spent a few dozens or hundreds of millions of years as air-breathing land animals before they got around to getting back in the water. The metabolic systems that fish-descended land animals brought with them in their return to the water offer formidable advantages over your average fish-eating fish. Any fish that would compete successfully in the "whale niches" would need a significant upgrade to its respiratory system at the very least.

jacob · 19 March 2008

Shebardigan:
jacob:
David Stanton: In fact a 1% selection advantage would be quite adequate.
How do you know that 1% would be quite adequate?
If you put $10.00 in a bank at 1% compound interest, for a hundred thousand years, what do you end up with?
Well with an inflation rate of just 3% you would have nothing.

jacob · 19 March 2008

David Stanton: Jacob, You are bercoming quite tiresome. Are you just arguing to argue or do you have some point you are trying to make? Of course fish could have evolved to occupy the whale niches more efficiently than whales, but that is not what happened. There was no plan, there was no goal, there was no reason why whales or anything like them ever had to evolve, it is just what happened. As for your assumption that a 1% selection differential is not enough to provide fixation, look up the equations yourself. I told you it was a deterministic process, if you don't believe me you do the math. There are plenty of examples of lower selection coefficients that have resulted in fixation. As for my circular reasoning, you are just making things up now. I did not say that since whales evolved 1% selection has to be enough. What I said was that since whales obviously did evolve that the selection coefficient was obviously large enough to allow them to evolve. If you think that that is circular reasoning then you are the one going around in circles. Now, do you admit that whales evolved from terrestrial ancestors or not? Do you admit that all of the developmental, palentological and genetic evidence supports this conclusion or not? If you do, quite arguing. If you don't, then you need to examine the evidence more closely. If you are not familiar with the evidence then go away until you are.
I think you should look at the evidence more closely esp that math side and until you are familiar with it or at least be willing to study it you should go away.

jacob · 19 March 2008

"Any fish that would compete successfully in the “whale niches” would need a significant upgrade to its respiratory system at the very least."

Why a fish's breathing system is much better suited to the water that a whales.

jacob · 19 March 2008

I do not know if any of the poster have the patience to do a walk thru to show my point:

1. Are any of you willing to agree that it is claimed that the whale evolved from land animal in 10 million years.

jacob · 19 March 2008

"What I said was that since whales obviously did evolve that the selection coefficient was obviously large enough to allow them to evolve."

You really do not see how what you just said is circular?

jacob · 19 March 2008

Pvm:

The expanded cardiac field in Ets1/2-activated mutants results in a proportion of animals having a functional, two-chambered heart. “The conversion of a simple heart tube into a complex heart was discovered by chance, but has general implications for the evolutionary origins of animal diversity and complexity”, says Mike Levine, a co-author of the paper.

In this situation animals went from a one chamber to two in one generation, correct?

Richard Simons · 19 March 2008

I do not think 1% would make a diff. Got any proof?
Proof? You've come to the wrong area if you want proof. Only mathematics deals with proof. However, if you want a convincing demonstration I suggest you do a simulation for yourself. Set it up so that each member of population A has 1.005 offspring and each member of population B has 0.995 offspring (a 1% difference), continue for 1,000 generations and see what you get. Start with the populations in any proportions you like. You will, of course, have to make a correction for the changing total population size. I am not going to do it for you as the best way to be convinced is to do it yourself. I just tried it and a starting population went from 0.1% to 96% in 1000 generations.
Shebardigan: If you put $10.00 in a bank at 1% compound interest, for a hundred thousand years, what do you end up with?
Well with an inflation rate of just 3% you would have nothing.
In this analogy, I do not understand what the inflation rate represents with regard to the whales unless it is a 3% drop in the population each generation. Perhaps you could clarify?

jacob · 19 March 2008

Richard: here is the original comment

Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip? It does not need to be overwhelming. Just a 1% better chance of surviving to produce offspring is enough for evolution to work.

This was my point: I do not see how this animal having its nostril in a position one inch from another identical genetic group other than the nostril would have a significant survival advantage to eventually wipe out the other type of animal. Of course if group A consistently loses 1% of its popluation and group B gains 1% per generation then group A will evenentually die out. But the point is will this change in nasal position cause this differential? And remember these two groups can mate with each other. Now if we had a group that developed a very disabling mutation say like a cleft nostril or a nostril that was almost close that group could be out competed. But it both of these groups could breath and hunt and run I do not see how this difference in nasal position would cause one group to out compete the other to extinction which would have to happen to have the gene pool be completely group B.

David Stanton · 19 March 2008

Jacob,

So, you really aren't familiar with the evidence after all. No, the evolution of whales from terrestrial ancestors took about 50 million years.

Here is your circular reasoning: I don't want to believe that whales evolved, therefore I refuse to believe it, therfore it didn't happen. Now that is circular reasoning.

Every adaptation that is known evolved in this way. Slight differences in fitness allow selection to operate over many generations eventually causing changes in characters. If you don't want to believe it then you tell us, why didn't God just make fish that could do what whales do?

Shebardigan · 19 March 2008

jacob: "Any fish that would compete successfully in the “whale niches” would need a significant upgrade to its respiratory system at the very least." Why a fish's breathing system is much better suited to the water that a whales.
Why? It isn't, actually, unless "better suited" means the organism always remains totally submerged. Relying on extraction of dissolved oxygen from water imposes a sharp limit on average metabolic rate compared to breathing oxygen directly. Air breathers have a much easier time maintaining a body temperature above ambient, for instance. For a predator, this is advantageous.

mark · 19 March 2008

It would not surprise me if additional study of cetacean (or related critter) genetics found that the factors regulating nostril position operated in such a way as to produce nostril shifts that were fairly sizable, not a mere 1/4 inch (or so) at a time. Sure, this is speculation, but it's testable speculation.

phantomreader42 · 19 March 2008

Prefect illustration of creationist thought (or lack thereof).
jacob: Richard: here is the original comment

Again why is it an overwhelming advantage to have a nostril 2 inches from the tip as opposed to 1 inch from the tip? It does not need to be overwhelming. Just a 1% better chance of surviving to produce offspring is enough for evolution to work.

This was my point: I do not see how this animal having its nostril in a position one inch from another identical genetic group other than the nostril would have a significant survival advantage to eventually wipe out the other type of animal. Of course if group A consistently loses 1% of its popluation and group B gains 1% per generation then group A will evenentually die out. But the point is will this change in nasal position cause this differential? And remember these two groups can mate with each other. Now if we had a group that developed a very disabling mutation say like a cleft nostril or a nostril that was almost close that group could be out competed. But it both of these groups could breath and hunt and run I do not see how this difference in nasal position would cause one group to out compete the other to extinction which would have to happen to have the gene pool be completely group B.
Yep, Jacob, you can't see how it could happen, therefore it didn't happen. The very definition of an argument from ignorance. So quick and easy, you don't have to waste any time looking at evidence, just refuse to admit reality, and reality goes away. It doesn't work like that in the real world. But you don't seem to live there anyway.

Henry J · 19 March 2008

mark said: It would not surprise me if additional study of cetacean (or related critter) genetics found that the factors regulating nostril position operated in such a way as to produce nostril shifts that were fairly sizable, not a mere 1/4 inch (or so) at a time. Sure, this is speculation, but it’s testable speculation. Comment #146927 on March 19, 2008 11:59 AM | Quote

I reckon it'd depend on how the related DNA changes get translated into changes in body part proportions. I guess that at some point there'd be signal of some sort to stop the migration of the air shaft when it reached its destination, and the changes in the DNA cause a change in when that signal gets generated. So the question might be how is that signal generated? Henry

Stanton · 19 March 2008

jacob: Pvm:

The expanded cardiac field in Ets1/2-activated mutants results in a proportion of animals having a functional, two-chambered heart. “The conversion of a simple heart tube into a complex heart was discovered by chance, but has general implications for the evolutionary origins of animal diversity and complexity”, says Mike Levine, a co-author of the paper.

In this situation animals went from a one chamber to two in one generation, correct?
Incorrect.

teach · 19 March 2008

What if the 1 inch change in the position of the blowhole comes about because the same morphological/embryological/developmetal changes that cause it also make other skeletal changes that are more than 1% advantageous? (Assuming that you refuse to accept the 1%advantage being "enough") That seems to me to be where MET diverges from what some like to call "Darwinism" - that it uses more than just straight gradualism to explain adaptive change.

Richard Simons · 19 March 2008

jacob: I do not see how this animal having its nostril in a position one inch from another identical genetic group other than the nostril would have a significant survival advantage to eventually wipe out the other type of animal. Of course if group A consistently loses 1% of its popluation and group B gains 1% per generation then group A will evenentually die out. But the point is will this change in nasal position cause this differential? And remember these two groups can mate with each other. Now if we had a group that developed a very disabling mutation say like a cleft nostril or a nostril that was almost close that group could be out competed. But it both of these groups could breath and hunt and run I do not see how this difference in nasal position would cause one group to out compete the other to extinction which would have to happen to have the gene pool be completely group B.
The best advice I can give you is to take a course in population genetics (or to study the textbook for one). There is too much material that needs to be covered to fit into a comment. Besides, it is many years since I took a course, I've rarely used it and no doubt there is additional information compared with what I received. But yes, the evidence is that even small differences in survival can change populations.

Robin · 20 March 2008

jacob: I do not see how this animal having its nostril in a position one inch from another identical genetic group other than the nostril would have a significant survival advantage to eventually wipe out the other type of animal. Of course if group A consistently loses 1% of its popluation and group B gains 1% per generation then group A will evenentually die out. But the point is will this change in nasal position cause this differential? And remember these two groups can mate with each other. Now if we had a group that developed a very disabling mutation say like a cleft nostril or a nostril that was almost close that group could be out competed. But it both of these groups could breath and hunt and run I do not see how this difference in nasal position would cause one group to out compete the other to extinction which would have to happen to have the gene pool be completely group B.
Richard Simmons: The best advice I can give you is to take a course in population genetics (or to study the textbook for one). There is too much material that needs to be covered to fit into a comment. Besides, it is many years since I took a course, I’ve rarely used it and no doubt there is additional information compared with what I received. But yes, the evidence is that even small differences in survival can change populations.
Since this discussion seems to have become more civil, here's my two cents. The problem that Jacob is having is that he is looking at evolution and advantage too linearly. The fact is, moving the blowhole back between or above the eyes on a whale had biometric advantages: lungs in deep diving mammals must expand to accomodate more air. For more efficient swimming and diving purposes, it makes more sense to have your "snorkel" directly over your lungs than on a snout. Even this is an over simplification since I have no idea what other parameters may limit or selectively force such a change. Indeed there may well have been an evolutionary "need" (read selective pressure) to move the nostrils back as the cranium and neck expanded. There may well have been a selective pressure on the nostril location as the palate changed shape. Any number of pressures that offered no advantage to breathing itself could have continued to move the nostril opening. The only caveate is that none of the selective pressures could have been a detriment to the whale for very long. Note that I did not say 'never' as many disadvantages changes that do not outright prevent an organism from breeding can hang around in a population long enough for a change in the environment or a further change in the offspring to make such a disadvantage an unexpected advantage.

Science Avenger · 20 March 2008

David Stanton: “What I said was that since whales obviously did evolve that the selection coefficient was obviously large enough to allow them to evolve.” Jacob: You really do not see how what you just said is circular?
It is not circular. A circular argument uses its conclusion as one of its premises. David's argument may use a premise with which you disagree, but that doesn't make it circular.
Jacob said: I think you should look at the evidence more closely esp that math side and until you are familiar with it or at least be willing to study it you should go away.
I'm sure I'm not the only one that would love to see this "math side" argument that you repeatedly refer to, and yet never reveal. It's starting to sound like all that super secret ID research that we always hear about but never see.

David Stanton · 20 March 2008

Thanks Science Avenger.

Well it looks like Jacob has run away. I know he claims not to have a religious agenda, but consider that he has all of the hallmarks of a classic creationist:

1) He questions the validity of evolutionary theory without offering any alternative

2) He is not familiar with any evidence and he refuses to examine any evidence

3) He demands answers from others and then refuses to answer questions that they ask him

4) He claims that he doesn't have to answer anyone who is rude to him, even though he repeatedly offends everyone else

5) He claims that he has no religious agenda (this one is usually a dead give away)

If anyone is really interested, the correct equation for the change in allele frequency due to selection on a newly arisen favorable dominant allele is:

p(t+1) = pt(ptw11 + qtw12)/w (where w is the average fitness of the population)

Under these conditions the favorable allele will initially increaase rapidly in frequency and then continue to increase more slowly to fixation. For example, when the allele frequency reaches 0.5 the change will be about 0.1% per generation.

Of course, fixation is not required in order to give rise to a better adapted subpopulation. Of course, one hundred new mutations each moving the blow hole 0.1 inches are not required. Of course the selection coefficient might be considerably higher than 1%. Of course the rate of change need not, and probably will not, be constant. Of course, some mutations will have some very large phenotypic effects. So, of course these calculations are completely meaningless. Still, it seems as though 50 million years would be plenty of time for the evolution of cetaceans to occur, given any reasonable assumptions.

The important thing is that the embryologic, palentologic and genetic data all show definitively that cetaceans evolved from terrestrial ancestors over a period of about 50 million years. Our good friend Jacob cannot dispute these findings, nor can he offer any alternative explanations. Apparently he thinks that copying and pasting every posting only to ignore the substance of the posting somehow constitutes an argument. As far as I can tell, his only purpose here and on the other thread was to make the thread as long and boring and tedious as possible. He certainly never made any discernable argument.

Henry J · 20 March 2008

Science Avenger:
David Stanton: “What I said was that since whales obviously did evolve that the selection coefficient was obviously large enough to allow them to evolve.” Jacob: You really do not see how what you just said is circular?
It is not circular. A circular argument uses its conclusion as one of its premises. David's argument may use a premise with which you disagree, but that doesn't make it circular.
That would only be circular if it was being used as the primary support for a thus-far unestablished theory of evolution. But given that the theory is already firmly established it's quite reasonable to treat it as already established when studying another the development of another clade. Henry

GuyeFaux · 20 March 2008

Not worth responding to. So many false statements it would take 500 words to show them all.

Really? You've wasted far more than 500 words thus far, so go ahead.

And that formula is comical.

Any other theory of change-over-time would have to supply a different formula for p(t+1). What's yours?

Henry J · 20 March 2008

Now Gould has done exactly this: the fossil evidence did not fit with the theory so he modified the theory: PE.

Um - that's what scientists DO. If a slight change to the theory makes it a better fit they do that. Gould noticed that fossils showed a more sporadic pattern than some earlier scientists had supposed. Ironically, as near as I can tell PE is closer to what Darwin said in the first place than to what scienists in the next few decades after him said.

We might be just inches away from a great new discovery but constantly throwing away data that does not fit into the ‘old school’ is going to prevent a new theory from being studied.

Yet strangely, that's exactly what Gould did that you just criticized him for doing. Henry

David Stanton · 20 March 2008

Jacob,

If you find my response so comical, why did you copy and paste the entire thing? Everyone can already see what I wrote. If you don't intend to give any credible response, why copy the entire post?

If you think the equation is incorrect, what equation would you suggest? That is the proper equation. Why don't you agree? Your response is comical. (And you can't say I am being impolite because you used those words first).

Do you want to add sexual selection, frequency dependent selection, assortative mating, hitchhiking, pleiotropy, founder effect, bottleneck, drift? Please, enlighten us as to what equation you think is appropriate. And also please tell everyone why my argument that this type of calculation is meaningless is not an argument you find convincing. Can you refute any of the points I made that would completely invalidate this approach?

You have asked me two questions, I have answered both of them. You have not accepted either answer but you have not provided any alternatives. Why don't you tell us what answer it is that you want? If you will not accept any answers, why do you ask for them?

Now about that genetic data. Got any response to that yet? If I ask pretty please without being insulting will you agree to answer? As long as you cannot refute this data, then my premise that whales evolved cannot be refuted and my reasoning is not circular. As long as you will not address the evidence, any arguments about rate of evolution, or power of selection are futile.

And anyway, you haven't made any argument yet. You still won't tell anyone why you think the math will not work out. You still have not given any equation or quantification of any kind. You have not given any estimates for any paramaters. No one else is going to make your argument for you. Either present some testable hypothesis or admit that you have none.

minimalist · 21 March 2008

So your answers all pretty much boil down to "NOOOOOOO NOT TRUE, NOT LISTENING LALALALALALA"

You really are a special little boy, jakie.

PvM · 21 March 2008

Again not worth responding to.

— Jacob
I understand, being asked to support your claims is best not responded to. Ah the power of denial...

David Stanton · 21 March 2008

Jacob,

You are extremely rude and I don't have to respond to anyone who is rude to me. Since you are not willing to engage in a civil scientific discussion, I will not respond to anything else you write. Until you answer my questions about the SINE insertions, I will not read anything else you have to write. I suggest that others treat you the same way.

If you show up on any other threads I will repeat my questions. I will keep asking until you answer or go away. Your refusal to discuss the evidence disqualifies you from any serious scientific consideration.

Science Avenger · 21 March 2008

Jacob: Again not worth responding to.
Amazing. Call him an ass and you get a lecture on polite discourse (akin to getting a lecture on diet from Hannibal Lecter), but make thoughtful detailed comments on his scientific claims, and that's not worthy of a response.
You really missed my point didn’t you
No dipshit, you and all the other evolution-deniers obsessed with "Darwinism" have missed the big point, which is that modern evolutionary theory left Darwin behind a long long LONG time ago. Were Darwin alive today, he'd hardly recognize it, and some of it would outright astonish him. If you think we are all here defending "old time evolution", you are even more out of touch than I thought you were, which is saying quite a bit.

mossimo · 8 June 2008

There are three theories about the origin a mankind, creation, evolution, and Ufology, the belief that mankind is Alien origin.
Creation is Christianity and other religious beliefs that mankind was created from the earth, evolution teaches that mankind evolved from the earth, and Ufology teaches God is an alien and mankind is a product of a genetic experiment with the primates. If this is true, then we have discovered the missing link to mankind and the primates.
To make everyone happy, we could agree with the UFO theory and say that God is an alien and humankind is the results of genetic experiment with primates. This would satisfy Christianity and other religious groups that believe in intelligent design. It also would be the missing link to how humankind evolved. But how could we solve the debate about life after death.
But have you ever considered why there much emphasis on our existed? Beginning with our childhood, most of us if not all have asked our parents, “How did we get here?” And I parents will tell our ancestry history linking us to the beginning of mankind and God.
Now why do you suppose, we asked this question? Now I am going to guess that you might say we were just curious about our existence. If this is your answer how do you explain it being a universal question that most children asked between the age of six and eight.
What if we never asked this question? Religion, evolution and Ufology would not exist. Why? It is because the origin of every belief begins with man questioning his existence. Neither would science. For without this thought there would be no reason for science to search for the origin and age of mankind, the earth, or the universe. We would be like the primates we supposedly evolved from.
Through science we learn the purpose of everything that exists. But what is mankind purpose? Do we exist to protect the human species, protect the earth and its inhabitants? Not if exist by chance. Besides if mankind is an advance stage of evolution, there is a major flaw. Mankind is a threat to himself and everything that exist. It is man's nature to protect the earth because God gave this task to him. God blessed them; and God said to them, "Be fruitful and multiply, and fill the earth, and subdue it; and rule over the fish of the sea and over the birds of the sky and over every living thing that moves on the earth." Genesis 1:28 (NASB) there are about 6 billions of people on the earth, mankind have subdued the earth and made things of creation, giving it a reason for existing, and man rule over every the animals.

Now if evolution is the truth and there is no God, the least that can happen is to die with the faith of believing that there is eternal life. If we are lucky we live to be of old age and good health. You just spend your hold life doing good for nothing. However there is a brighter side to your belief. Your efforts of being generous are good for society. Therefore, why not let people believe that God exist, that if it there belief promotes good works. On the other hand, if there is an afterlife, the worst that can happen is dying and wakening up to an afterlife..
Now about the origin our thoughts, the bible says that God set eternity in man's heart. It also says that man will not find out the work which God has done from the beginning even to the end. In this case it means creation for it says that everything made appropriate for its time.
He has made everything appropriate in its time. He has also set eternity in their heart, yet so that man will not find out the work which God has done from the beginning even to the end. Ecclesiastes 3:11 (NASB)
This passage explains mankind relentless pursuit to discover the origin of life and why there are various beliefs about the life's origin. The bible also says that mankind suppressed the truth about creation. For the wrath of God is revealed from heaven against all ungodliness and unrighteousness of men who suppress the truth in unrighteousness, Romans 1:18 (NASB)
God already gave mankind a hint when He said every creature came from the earth and was created according to its kind. Thousands of years later science discovers that mankind came from the earth.
. Scientists that support evolution believe it the only idea that holds biology together. In other words, without evolution nothing in biology makes sense. On the contrary scientists supporting creation believes that creation is the only way of understand how life exist. Everything that exists was created for a purpose and science is the way of understanding the purpose and meaning of everything created. This is the task given to humankind by the creator. Moreover, without the wisdom and knowledge of creation even biology would not exist.

Henry J · 8 June 2008

Evolution theory does not imply absence of God; it only implies that life forms are ancestrally related to each other, just as they appear to be to those familiar with the subject area.

Henry

mossimo · 8 June 2008

Henry J said: Evolution theory does not imply absence of God; it only implies that life forms are ancestrally related to each other, just as they appear to be to those familiar with the subject area. Henry

mossimo · 8 June 2008

the only way that life is related is because the earth was made from water and all life species come from the earth. read 2 peter 3. In Gen 1, God created all things according to its kind.

Don't be deceived, evolution do imply that God does not exist. For example God says the there is an afterlife, but evolution says there is no Afterlife. Now if you want to gamble with your eternity that is up to you. But eternity without God is like living on the earth without any moral or goodness. So if you think world is evil now, just wait until the afterlife. Now if there is no after life, you don't have anything to worry about, but if there is you will have a lot to worry about.

Henry J · 9 June 2008

God created all things according to its kind.

Even if true, that does not imply absence of ancestral relationship.

Don’t be deceived, evolution do imply that God does not exist

I've read enough about it to know that evolution does not deny existence of God. If you think it does, then you have been deceived about the science.

but evolution says there is no Afterlife.

Evolution says absolutely nothing about an afterlife.

read 2 peter 3. In Gen 1,

Those verses were written by people, expressing their beliefs about God. If the universe was created by God, then the universe itself is the "word" of God much more than is scripture in a book written by people. Besides, people have learned stuff about the universe since then. Henry

mossimo · 11 June 2008

You know there is truth in creation, evolution, and the belief that mankind is a product of an alien experiment and it is that mankind came from the earth. But of course the Bible gave us a hint thousands of years ago that mankind came from the earth. The bible says that God put eternity in man’s heart yet mankind would never discover the work of God from the beginning to the end. Eternity is the reason we asked our parents," Where did we come from" This is the beginning of our journey of discovering God, our purpose and what happens after death. This question is also the core of everyone’s belief. Without this question, religion, evolution, or Ufology would not exist. Moreover there would be no reason for science to discover the origin of man, the earth, or the universe. There we would be like the primates we supposedly have evolved from. I hope you think about this.
The bible says that mankind purpose is to procreate, fill the earth and rule over the animals. Evolution teaches that man is an advance stage of evolution evolved for a similar purpose. In fact you don’t have to read to the bible to know this. Just look around you, there 6 billion people in the world, mankind have subdue the earth making thing s out of creation, and he rules over the animals. Our purpose is as natural as breathing. We never think about breathing until we are out of breath. The threat of global warming is the reason that man recognizes his stewardship over the planet.
Now if mankind is an advance stage of evolution then there is a major flaw in evolution. Mankind is a threat to his existence, the planet and other life species. It would have been better for us to stay in our primate state.
Now if mankind was to vanish from the earth the evidence of his existence would be what he has made from creation. Just the same the evidence that God exist is creation. And since mankind is made in his image he emulates God by creating things from creation giving them a reason for existence. Even the attempt clone in the image of man is because man emulates God nature.
If man wrote the Bible did he know that the earth was once a super continent, the earth is round and hangs on nothing, the expanse of the heavens cannot be measured neither the stars can be counted.
Now if I am wrong I just die believing what I believe. But will I be wrong to promote my faith if it inspires others to love one another, do good to others. Think what the world would be like if we all did this. So why discourage people from trying to believe in God. We have soldiers dying for our rights and we honor them. Jesus died for our sins and people reject Him. Now if there is a motive behind evolution it is because no one wants you to learn the truth about mankind's heart. And the truth is that mankind heart is the reason why the wars, famines, and diseases. However, I do respect your beliefs.

mossimo · 11 June 2008

The bibles say to examine all things. For this reason I don not ask a person to believe in creation, however I suggest that we examine every religious and non religious beliefs about mankind existence.
And as you do think about this. God says mankind will not discover His work from the beginning to the end. Evolution trys to explain how life began. Ufology teaches says that God is an alien, the Big bang theory was the Planet X colliding without another planet creating the earth and the moon, And the missing link between mankind and primates is Aliens DNA.
and there are varous relgious belief that contents with the Gen. story of creation. The bible also says what seems right to man end in death. Now the truth stands alone but the lie needs the truth to exist. that is why in every lie there is some truth. And the truth about mankind existence that the he is of the earth. But before science confirm this God said it. Which means in this case science validates what God said. The problem with science is that it tries to discover the beginning of God's work.

mossimo · 11 June 2008

Of course people have learn much about the universe, the Bible says that mankind's knowledge would increase. That is why God said mankind is without excuse. The knowledge of creation is proof that God exist.
The lack of knowledge about creation is the reason why Darwin believed that life evolved. Nevertheless the scriptures prophesied that man will suppress the the truth about creation.
Now that mankind knowledge have increase there is no excuse for rejection intelligent design and believing in a natural process of selection of survival of the fittest. Furthermore for creation to exist each species must depend on others to exist. This is impossible if it took millions of years for things to evolved.
The chance that life is evolved is like sending a rocket to the moon without the knowledge of the solar system .
For mankind to send a rocket to the moon. He had to determined the distance to the moon from the earth and determine the exact time the launch the rocket, since the earth spins on its axis and the moon orbits around the earth. Now if took wisdom and knowledge for mankind to figure this the solar system had to be created with knowledge and wisdom. The Bibles says By wisdom and knowledge the heavens and earth was created. And God gave mankind the task to discover everything He created.
Now if everything evolved by chance then everything would be unstable.
Mankind is unstable because he reject the knowledge and wisdom of God to procreate, protect the environment and rule over the creatures. at least you must agree to that.