Entropy and evolution

Posted 10 November 2008 by

Blogging on Peer-Reviewed Research

One of the oldest canards in the creationists' book is the claim that evolution must be false because it violates the second law of thermodynamics, or the principle that, as they put it, everything must go from order to disorder. One of the more persistent perpetrators of this kind of sloppy thinking is Henry Morris, and few creationists today seem able to get beyond this error.

Remember this tendency from order to disorder applies to all real processes. Real processes include, of course, biological and geological processes, as well as chemical and physical processes. The interesting question is: "How does a real biological process, which goes from order to disorder, result in evolution. which goes from disorder to order?" Perhaps the evolutionist can ultimately find an answer to this question, but he at least should not ignore it, as most evolutionists do.

Especially is such a question vital, when we are thinking of evolution as a growth process on the grand scale from atom to Adam and from particle to people. This represents in absolutely gigantic increase in order and complexity, and is clearly out of place altogether in the context of the Second Law.

As most biologists get a fair amount of training in chemistry, I'm afraid he's wrong on one bit of slander there: we do not ignore entropy, and are in fact better informed on it than most creationists, as is clearly shown by their continued use of this bad argument. I usually rebut this claim about the second law in a qualitative way, and by example — it's obvious that the second law does not state that nothing can ever increase in order, but only that an decrease in one part must be accompanied by a greater increase in entropy in another. Two gametes, for instance, can fuse and begin a complicated process in development that represents a long-term local decrease in entropy, but at the same time that embryo is pumping heat out into its environment and increasing the entropy of the surrounding bit of the world.

It's a very bad argument they are making, but let's consider just the last sentence of the quote above.

This represents in absolutely gigantic increase in order and complexity, and is clearly out of place altogether in the context of the Second Law.

A "gigantic increase in order and complexity" … how interesting. How much of an increase? Can we get some numbers for that?

Daniel Styer has published an eminently useful article on "Entropy and Evolution" that does exactly that — he makes some quantitative estimates of how much entropy might be decreased by the process of evolution. I knew we kept physicists around for something; they are so useful for filling in the tricky details.

The article nicely summarizes the general problems with the creationist claim. They confuse the metaphor of 'disorder' for the actual phenomenon of entropy; they seem to have an absolutist notion that the second law prohibits all decreases in entropy; and they generally lack any quantitative notion of how entropy actually works. The cool part of this particular article, though, is that he makes an estimate of exactly how much entropy is decreased by the process of evolution.

First he estimates, very generously, how much entropy is decreased per individual. If we assume each individual is 1000 times "more improbable" than its ancestor one century ago, that is, that we are specified a thousand times more precisely than our great-grandparents (obviously a ludicrously high over-estimate, but he's trying to give every advantage to the creationists here), then we can describe the reduction in the number of microstates in the modern organism as:

microstates.jpg

Now I'm strolling into dangerous ground for us poor biologists, since this is a mathematical argument, but really, this is simple enough for me to understand. We know the statistical definition of entropy:

entropy.jpg

In the formula above, kB is the Boltzmann constant. We can just plug in our estimated (grossly overestimated!) value for Ω, have fun with a little algebra, and presto, a measure of the change in entropy per individual per century emerges.

change_in_entropy.jpg

Centuries are awkward units, so Styer converts that to something more conventional: the entropy change per second is -3.02 x 10-30 J/K. There are, of course, a lot of individual organisms on the planet, so that number needs to be multiplied by the total number of evolving organism, which, again, we charitably overestimate at 1032, most of which are prokaryotes, of course. The final result is a number that tells us the total change in entropy of the planet caused by evolution each second:

-302 J/K

What does that number mean? We need a context. Styer also estimates the Earth's total entropy throughput per second, that is, the total flux involved from absorption of the sun's energy and re-radiation of heat out into space. It's a slightly bigger number:

420 x 1012 J/K

To spell it out, there's about a trillion times more entropy flux available than is required for evolution. The degree by which earth's entropy is reduced by the action of evolutionary processes is miniscule relative to the amount that the entropy of the cosmic microwave background is increased.

This is very cool and very clear. I'm folding up my copy of Styer's paper and tucking it into my copy of The Counter-Creationism Handbook, where it will come in handy.


Styer DF (2008) Entropy and evolution. Am J Phys 76(11):1031-1033.

237 Comments

Stanton · 10 November 2008

This is magnitudes better than my counter-argument of "if evolution violates the 2nd Law of Thermodynamics, how do you think babies and embryos are formed?"

Matherly · 10 November 2008

I have found the best argument against evolution violating the 2nd law is to point out that it specifically states WITHIN A CLOSED SYSTEM, and if the creationist does not understand what that means then I bring her/him into the Sun's warm glowing warming glow.

TomS · 10 November 2008

I have no objections to the science that you present, but I have reservations about - well, I guess I'd call it the rhetoric.

It may give the impression to the intended audience that there is some highly technical point being argued between two legitimate scientific points of view. Someone could think that among all of the scientific language we are being asked to decide between two competing, equally legitimate, scientific points of view.

For people who are able to follow the math, Styer's approach has its place. It makes an interesting and important point, but there are a lot of people who will just remain mystified by it all.

I'd suggest another response, one that could be understood even by people with "math phobia". One which does not allow the impression that there is a legitimate thermodynamics objection to evolution.

That's why I would go along with Stanton's response. (BTW, a lot of the complaints that we hear about evolutionary biology are no less applicable to reproductive biology.) Oak trees and acorns - how much disorder/entropy is produced when an oak tree produces an acorn; how much when an acorn produces an oak tree?

Other alternatives that I would suggest would be something like these:

1. One of the founders of thermodynamics, Ludwig Boltzmann, someone who surely understood thermodynamics, was an admirer of Charles Darwin.

2. How does the order in the fossil record come about? Henry Morris suggested that the fossils could be ordered by hydrodynamic sorting. Wouldn't it be contrary to Morris's understanding of the second law for the order of the fossils to come about by such a process? Perhaps Morris intuitively understood that undirected natural processes really can increase order, and they don't violate the 2nd law when they increase order.

3. The laws of thermodynamics apply to human actions as well as natural processes. Intelligent, purposeful agents cannot bypass the second law of thermodynamics any more than anything else. After all, the laws of thermodynamics were discovered precisely because the very clever engineers of the 19th century came up against certain limitations. They couldn't design their way around these limitations. So, if we ever were to discover a process which violates the 2nd law of thermodynamics - well, then, intelligent, purposeful design is the last place to look for an explanation. Perhaps natural processes that increase order are not in violation of the 2nd law.

4. And that leads to the question of how intelligent, purposeful design would increase order. Even if it could be shown that evolution couldn't do it, that doesn't show how design could do it. As long as there is no description of how design could do it, design is no improvement on evolution. Why would a designer/creator make the laws of thermodynamics, only to bypass them when they are inconvenient?

5. Evolution does happen. Even a lot of the creationists have been forced to concede that a certain amount of evolution happens - what they call "micro"evolution, or evolution within a "kind". Evolution can be observed to happen, and can be studied in the wild and under laboratory conditions. The 2nd law of thermodynamics does not allow of "just a little violation", so "just a little evolution" is not allowed a bypass of the 2nd law.

Eamon Knight · 10 November 2008

For a while, I've been thinking of an argument along the following lines:

"What, in actual numbers with units, is the thermodynamic entropy of a human body? What is the thermodynamic entropy of an equivalent mass of bacteria? Are they different? If you can't answer those questions, then you can't even start to make the argument that 2LoT prevents prokaryotes from evolving into humans".

Of course, being neither a chemist nor a biologist, I have no idea whether the above is valid (as an engineer, my thermo was mostly restricted to heat engines and refrigerators). And not being a creationist, I'm not going trot out an argument just because it sounds good ;-).

Henry J · 10 November 2008

The local entropy reduction of evolution is trivial compared to that of normal growth of egg or seed to adult organism.

Normal growth is observed to happen.

Therefore limits on local entropy reduction don't prevent evolution.

QED

Scott · 10 November 2008

I prefer to point to the formation of snowflakes. If the creationists are correct that everything must proceed to disorder, wouldn't that also prevent highly disordered water molecules from forming strongly ordered snowflakes?

tomh · 10 November 2008

TomS said: 1. One of the founders of thermodynamics, Ludwig Boltzmann, someone who surely understood thermodynamics, was an admirer of Charles Darwin.
Why would this impress anybody, let alone a creationist? History is full of brilliant people who admire all sorts of loony ideas and people.

phantomreader42 · 10 November 2008

Well, creationists love that kind of bullshit argument by admiration. Maybe if it's used in favor of reality, something creationists would rather die than accept, they'll realize the argument is bullshit. Just like Ken Ham loves lying constantly, writing entire books for the sole purpose of slander, but accuse him of raping piglets and he gets all offended, almost like he thought there was something wrong with making shit up.
tomh said:
TomS said: 1. One of the founders of thermodynamics, Ludwig Boltzmann, someone who surely understood thermodynamics, was an admirer of Charles Darwin.
Why would this impress anybody, let alone a creationist? History is full of brilliant people who admire all sorts of loony ideas and people.

Dave Wisker · 10 November 2008

I prefer to point to the formation of snowflakes. If the creationists are correct that everything must proceed to disorder, wouldn’t that also prevent highly disordered water molecules from forming strongly ordered snowflakes?
It's more fun to mess with them and ask why a mixture of oil and water spontaneously forms into the more ordered state of separation. When you then explain that the more ordered state is also at a higher level of entropy than the mix, it's priceless to see them realize that an increase in order doesn't have to be accompanied by a decrease in entropy. It pulls the rug out from under their entire argument.

zz · 10 November 2008

People always get confused about the second law of thermodnamics because they don't understand their system boundaries.

The second law says that the entropy of any CLOSED SYSTEM must always increase.

So to apply the second law to a biological system you need to apply it to a closed system. This means you need to take into account all the air we inhale and exhale, and the food and water that passes through our systems.

Ultimately the food we excrete has much more entropy than the food we ate etc. The energy we derive from the food and air is used by our biological processes to create a LOCAL decrease in entropy. This may look like a violation of the second law of thermo, but it isn't because you need to account for the increase in entropy in the food we excrete and the CO2 we exhale.

That is why the "closed system" part of the second law is so important.

Henry J · 10 November 2008

The second law says that the entropy of any CLOSED SYSTEM must always increase.

Not to mention that entropy refers to the possible states of the quantum particles making up the system, which has nothing to do with the number of possible arrangement of codons in a polymer. Henry

Nick (Matzke) · 10 November 2008

FYI here's the link to Styer's article:

Styer DF (2008) Entropy and evolution. Am J Phys 76(11):1031-1033.
http://dx.doi.org/10.1119/1.2973046

Nick (Matzke) · 10 November 2008

PS Styer is well aware of and already said the various points people are making:

Does the second law of thermodynamics prohibit biological evolution? The erroneous answer “yes” is sometimes presented in the creationist literature,1,2 and more often in creationist web sites. Henry Morris, for example, finds it “obvious that the Second Law of Thermodynamics constitutes a serious problem to the evolution model” because “every system left to its own devices always tends to move from order to disorder.”1 The creationist argument is that advanced organisms are more orderly than primitive organisms, and hence as evolution proceeds living things become more ordered, that is less disordered, that is less entropic. Because the second law of thermodynamics prohibits a decrease in entropy, it therefore prohibits biological evolution. This argument rests upon two misconceptions about entropy. • Disorder is a metaphor for entropy, not a definition for entropy.3,4 Metaphors are valuable only when they are not identical in all respects to their targets. (For example, a map of Caracas is a metaphor for the surface of the Earth at Caracas, in that the map has a similar arrangement but a dissimilar scale. If the map had the same arrangement and scale as Caracas, it would be no easier to navigate using the map than it would be to navigate by going directly to Caracas and wandering the streets.) The metaphor of disorder for entropy is valuable and thus imperfect. For example, take some ice cubes out of your freezer, smash them, toss the shards into a bowl, and then allow the ice to melt. The jumble of ice shards certainly seems more disorderly than the bowl of smooth liquid water, yet the liquid water has the greater entropy.5 • Although the entropy of the universe increases with time, the entropy of any part of the universe can decrease with time, so long as that decrease is compensated by an even larger increase in some other part of the universe.6 For example, any hot cup of coffee left to its own devices on a tabletop decreases in entropy. (This creationist argument also rests upon the misconception that evolution acts always to produce more complex organisms. In fact evolution acts to produce more highly adapted organisms, which might or might not be more complex than their ancestors, depending upon their environment. For example, most cave organisms and parasites are qualitatively simpler than their ancestors.7 This biological misconception will not be discussed in this article.) These misconceptions have been pointed out numerous times,8 but here we explicitly and quantitatively answer questions such as “What entropy changes accompany evolution?” and “If the entropy here on Earth is decreasing due to evolution, where is the other piece of the universe where the entropy is increasing?”

GCUGreyArea · 10 November 2008

Quite a few (but not all) creationists but more typically ID'ers (who would fervently deny being creationists) would argue that natural or 'un-guided' processes can't create order from disorder and so evolution can't work because it would violate the second law. Point out any human made devices that cause local decreases in entropy (i.e a heat pump) and they say that its because they are intelligently designed.

So I often wondered, is this the only law of physics that intelligent humans are allowed to break? Are there any others, gravity perhaps... is it time to unpack my superman outfit?

iml8 · 10 November 2008

Scott said: I prefer to point to the formation of snowflakes. If the creationists are correct that everything must proceed to disorder, wouldn't that also prevent highly disordered water molecules from forming strongly ordered snowflakes?
Another good rebuttal to the "can't get something for nothing (information-thermodynamics)" argument is to take 500 of one type of atom and 500 of another atom and arrange them in a 10 x 10 x 10 cube. What's the odds of them arranging themselves in a sequence in which the two types of atoms neatly alternate? On the face of it, 2^500 ... but if the atoms are sodium and chloride, this is a piece of cake salt crystal. Even a cube 100 atoms on a side (superficial odds 2^500,000) wouldn't be much trouble. As Mike Elzinga has pointed out, however, textbook writers tend to bring this down on our own heads by using various mechanical mixing examples (colored balls) to illustrate entropy. Alas thermodynamics is concerned about energy states and such examples are misleading. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

Sylvilagus · 10 November 2008

Thanks for this post. I found it interesting.

Now, a few comments on arguing with creationists. Unfortunately, I have to do this a lot in my field (High school education).

First, using examples like sperm/egg to embryo or any other biological example makes sense for those who already understand entropy, but committed creationists always (in my experience) say this is "circular reasoning." They already believe that biological systems were designed, so pointing out a reduction in entropy by a bio-system proves nothing to them other than what they already believe: somehow life violates the 2nd law. However absurd this is, it's very difficult to shake them from it because the "tornado in a junkyard argument" and its concomittant confusion of colloquial disorder with entropy is so entrenched in their minds... "it's just obvious."

Second, I've always been much more successful with examples like the snowflake. Here they usually fall back on the idea that its not "enough" order to be a problem for the 2nd law. Again absurd.

Third, the most successful approach I've found is to show them that the 2nd law is a mathematical equation and the mathematical definition of entropy, to point out that entropy is, at least in principle, a value that can be calculated, or at least estimated. I then ask them how they know that evolution breaks the 2nd law, where the calculations are that show this. I point out that thermodynamic calculations are commonplace and no scientist would make claims about entropy in their experiments without conducting such calculations. I then challenge them to find even a single creationist calculation showing that evolution violates the 2nd law. Almost always they have to admit that they are responding on a "gut" level, which it is easy then to point out is not scientific. The honest creationists I know (not the professional charlatans) have always backed down on this point. Your post adds to this approach, not because the creationists can follow the math, but because it offers an example of the kind of calculation a creationist would have to do in order to support their claims.

Lynn David · 10 November 2008

When talking with lay persons I prefer to speak about the states of energy how energy from the sun as light is degraded by life processes into latent forms of energy such as heat or fossil fuels representative of only potential energy and in doing so point out that life is an "entropy engine."

But I'm sorta simplistic myself....

David Fickett-Wilbar · 10 November 2008

I was hoping someone could help out a non-scientist here. I get the idea that the 2nd law refers to an entire system, and that it's just peachy if parts of the system decrease in entropy as long as other parts increase by more.

What I don't understand is what is meant by something having more entropy than something else. The oil and water example wouldn't have impressed me for this reason. Is there an easy way to explain it to me so I can explain it easily to others?

An example I would like to be able to use is the Hindenburg. Two disordered gases combining into a more ordered compound, with a huge release of entropy. That so many people have seen so graphic an image would be a big plus. Am I right in seeing this as an example?

iml8 · 10 November 2008

Sylvilagus said: Second, I've always been much more successful with examples like the snowflake. Here they usually fall back on the idea that its not "enough" order to be a problem for the 2nd law.
That's the old comedy routine: ORDER CANNOT ARISE SPONTANEOUSLY FROM DISORDER. THERE IS ABSOLUTELY NO SUCH THING AS A FREE LUNCH. "But what about snowflakes, salt crystals, spontaneous separation of mixtures and so on? Don't they count?" NO. THEY ARE TOO TRIVIAL. "Ahhh ... so there's absolutely no such thing as a free lunch -- but free snacks are OK!" Along the same lines it is useful to point out that evolution by natural selection simply says that organisms reproduce, they undergo mutations that lead to modified offspring, and environmental selection picks out the modified offspring that are better suited to survive. Which of these steps violate the Second Law? Reproduction? Mutation? Selection? If none of three violate the second law on their own, how do they do so in combination? Of course this leads straight to: THERE IS ABSOLUTELY NO SUCH THING AS A CONSTRUCTIVE MUTATION. -- sometimes enshrined as the "law of genetic entropy", but that's another kettle of slippery eels. It has been pointed out that complexity tends to arise as a "hangup" on the road to higher entropy -- complex storm systems for example, produced essentially by solar heating. If there weren't such complexity "hangups" the heat death of the Universe would have likely happened a long time ago. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

DS · 10 November 2008

Nick,

If you are out there, could you please close the thread on "immune to evidence". It has become infested by a banned troll who has excreted 2700 off-topic comments there. Thanks.

Mike · 10 November 2008

What's always fascinated me about creationists lying about thermodynamics is that even though just six words sum up how absurd the lie is (Earth is not a closed system.) they continue to repeat the lie. To prepare the flock for the obvious rejoinder, they produce a counter argument that's even more absurd. They redefine the 2nd law till its more to their liking, essentially ignoring the 2nd law and making a new argument. http://www.christiananswers.net/q-eden/edn-thermodynamics.html To their minds, apparently, this allows them to continue making the same absurd claim.

A mathematical explanation of entropy for the rest of us is at http://www.talkorigins.org/faqs/thermo/probability.html

Henry J · 10 November 2008

What’s always fascinated me about creationists lying about thermodynamics is that even though just six words sum up how absurd the lie is (Earth is not a closed system.) they continue to repeat the lie.

Another point is that if there were an obvious simple argument that would somehow undermine the whole theory, the theory would never have been accepted in the first place. That's because in that case, one or more scientists would have tried to make themselves famous by clobbering somebody else's theory, and if the argument were valid they would have. Henry

Nick (Matzke) · 10 November 2008

OK I'm closing this ridiculous thread. In the future email matzkeATberkeley.edu directly if you really need action...

Nick (Matzke) · 10 November 2008

Actually I closed the 2700 comment thread I mean...

DS · 10 November 2008

Nick,

Thanks, you are my hero. Please everyone, take note of what can happen if you allow this troll to post on any other threads. Anything that it posts under any name should be removed immediately.

stevaroni · 10 November 2008

I always simply ask them what the 2nd law actually says (or the 1st law, or the 0th law).

I have never gotten an answer more coherent than "entropy increases".

snaxalotl · 10 November 2008

this is a very thinky post, it makes my head hurt. I was going to suggest that for most creationists it's best to just say "do you realise 2LOT is an actual equation with numbers and symbols and such"?, but I'm pleased to see Sylvilagus has already suggested essentially the same thing as the most effective direction in his experience ... the harsh realisation that 2LOT isn't the convenient english sentence they think it is, and the unsettling feeling that someone is about to expect you to do some math.

If you have time to spare, the fun way is to feign ignorance on being told "2LOT therefore blah blah blah" and ask "that's interesting. what exactly IS the 2LOT, then"? You let them run around in circles as you reject suggestions, and you can reveal quite early that you actually know and you're not telling - after all, they are the one telling you how much they know about 2LOT. And if they ever do manage to find something with a delta S in it, you can stare at it blankly and say "well how does that prove evolution isn't true"?

naturally, this post is excellent and has it's place. I just wanted to emphasise that it's a pretty rare situation where this is the relevant information you'll be needing.

stevaroni · 10 November 2008

While we're at it, can somebody explain the entropy units - J/K?

Joules/Kelvin is not an intuitive unit for me, and I can't quite wrap my head around exactly what that would mean.

Rex · 11 November 2008

Pearls before swine! ... But, nice try.

The religionists are too dumb to understand what you just told them, even if they were inclined to look at your proof. Nonetheless, we appreciate your efforts.

Let us know if you have any success with that.

Frank J · 11 November 2008

I have found the best argument against evolution violating the 2nd law is to point out that it specifically states WITHIN A CLOSED SYSTEM, and if the creationist does not understand what that means then I bring her/him into the Sun’s warm glowing warming glow.

— Matherly
Lemme guess. Then they trot out another canard (e.g. "where are the transitionals?" or "why are there still monkeys?") and save the 2LOT argument for someone who will fall for it, right? To be fair, surely some rank-and-file creationists might actually learn and stop misrepresenting science, but too often I find that those who peddle those canards are at least partly in on the scam.

GvlGeologist, FCD · 11 November 2008

I just want to acknowledge all those who consistently answered said "banned troll" in that mammoth thread. By responding to the troll (without hope of success - it is immune to logic, reason, or evidence), they kept the rest of PT free of its pollution. Other threads have been relatively troll-free in the meantime. And whenever I saw that it had vomited another post, I could ignore it. I have enjoyed PT much more in the absence of that troll, and now unfortunately, expect to see it in other threads again. In addition, by conscientiously pointing out the failures of all of its arguments (along with its threats and other OT comments, it helped show lurkers the lack of substance of the dedicated creationist. I salute and thank you for helping keep PT troll-free!
DS said: Nick, If you are out there, could you please close the thread on "immune to evidence". It has become infested by a banned troll who has excreted 2700 off-topic comments there. Thanks.

eric · 11 November 2008

Sylvilagus said: the most successful approach I've found is to show them that the 2nd law is a mathematical equation and the mathematical definition of entropy, to point out that entropy is, at least in principle, a value that can be calculated, or at least estimated. I then ask them how they know that evolution breaks the 2nd law, where the calculations are that show this.
Sylvilagus, have you had any luck pointing out that the law has no "out" for intelligence? Write dS = dQ/T on the board and ask the student to show where the exception for intelligence occurs. I.e. leading class discussion to the conclusion that there isn't one, therefore "intelligent design" cannot explain anything breaking the 2nd law. In a rational world (I know, I'm daydreaming) this could lead to the understanding that the laws of thermodynamics do not forbid nature from doing anything that humans can do, because there are no exceptions for intelligent action.

Stephen Wells · 11 November 2008

Re. the question about units: T dS is a change in energy, so the unit of S multipled by the unit of T must give units of energy. Kelvins times Joules/Kelvin gives Joules.

DS · 11 November 2008

Thanks Gvl. Wayne and PvM deserve most of the credit. In fact, I nominate Wayne for the Lazarus award (I can explain the Star Trek reference if anyone needs an explanation). Maybe the moderators will actually enforce the rules here from now on and have the troll of many names automatically banned for good. If not, I recommend that no one respond and that all posts from the troll be immediately deleted, no matter what name it uses.

Now back to our regularly scheduled programming.

I know it's kind of an argument from authority, but I always like to point out that no real scientist believes that the second law of thermodynamics prevents evolution, so obviously amateurs are making some fundamental mistake if they try to claim this. I also like to point out that the sun is the source of the energy driving the temporary condition of negative entropy that we call life and that when the suns ceases to shine that condition will no longer continue. Does anyone have a calculation for how long the sun would have to shine to supply the energy needed according to the equation above? My guess would be that it would be minutes to days at most, depending on whether you counted only the radiation reaching the earth or the total output of the sun. That's not really a lot considering the last 4.5 billion years of sunshine.

Stephen Wells · 11 November 2008

Should that not be ds > dQ/T ? Or am I confused?

SWT · 11 November 2008

Stephen Wells said: Should that not be ds > dQ/T ? Or am I confused?
The definition of entropy is dS = (1/T) dQ for a reversible process (that is, a process is never more than differentially away from equilibrium). The inequality shows up when the process is irreversible.

iml8 · 11 November 2008

DS said: If not, I recommend that no one respond ...
"No matter how obviously dimwitted, deaf, and transparently provocative the troll, someone will accept it as an imperative to argue with him." Or put simply: "Some folks just like to argue." I felt that allowing the troll and those who liked to argue with him to have at it in their own little corner seemed to be a nice compromise in light of the fact that PT is incapable of enforcing bans. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

Stephen Wells · 11 November 2008

I think we can stick with the inequality form of the statement. Biology is irreversible :)

Matherly · 11 November 2008

Frank J said...

"Lemme guess. Then they trot out another canard (e.g. “where are the transitionals?” or “why are there still monkeys?”)"

Well... yea. The Gish Gallop is alive and well.

Mike Elzinga · 11 November 2008

We had a discussion about this over on the One Hundred and Fifty Years thread a little while ago. It was triggered by a question about entropy after Sal of Several Shallow Degrees tried to bait us with “Genetic Entropy”

I provided a few examples over on that thread and also responded to a question about the “Zeroeth Law”.

But to reiterate some important points here, entropy and thermodynamics is about energy, not order and information. The confounding of these concepts has been as frustrating for physicists as it has been for biologists and laypeople trying to understand them. The use of the word entropy in information theory has been partly responsible, but so has the use of order versus disorder in the examples used in popularizations that attempt to explain entropy to the general public. Creationists such as Henry Morris and Duane Gish have capitalized on this confusion and compounded it.

Entropy is not about the spatial order or disorder of objects or molecules or matter. The omega in the Boltzmann expression for entropy is the number of available energy states in a physical system. Keeping this at the front of the mind makes all the difference. (At a deeper level, the equivalence of mass and energy, and the conversions between them, introduce some subtleties; but I can save those for later if necessary.)

Those examples of snowflakes or any other examples of atoms or molecules condensing into regular patterns are good starting points to make the distinction between spatial order and available energy states. Atoms and molecules cannot condense into regular patterns (determined by the rules of quantum mechanics) until energy can be released. If energy is retained, the interactions are called “elastic” and the atoms or molecules simply continue to bounce off each other, unable to settle into the “mutual potential wells” that are determined by quantum mechanical rules and emergent phenomena like Van der Waals forces.

However, if other energy states become available that allow paths for energy to flow out of the system, then the atoms or molecules can settle into regular arrays or other patterns. The spatial ordering is not a decrease in entropy; the number of available energy stateshas actually increased because energy now has additional paths out of the system. It is carried away by photons, phonons, or other particles onto which momentum and kinetic energy can be transferred and carried out. Chemists and engineers know this by the term “latent heat of fusion”. It is another way of saying that the interactions between atoms or molecules become “inelastic” because energy is “dissipated”.

The mistake is to claim that because the order of the atoms or molecules has “increased”, therefore entropy has decreased. It hasn’t; energy has been channeled out of the immediate system and has gone off to infinity where it gets further scattered or absorbed and cannot return to the system. To repeat; more energy states became available. Entropy has increased. That is the essence of the Second Law of Thermodynamics.

One could say that “entropy has decreased locally at the expense of its increasing globally” because of the increase of energy states provided by the larger environment in which the system of interest is imbedded. However, I think it is better pedagogically to recognize the outgoing energy “channels” as an increase in the number of available energy states. (Besides, the spontaneous emission of photons that carry away energy is not “provided" by an external environment. Unless those photons are reflected back into the system, i.e., the system is adiabatically enclosed, the photons represent additional energy states available to the system, leaving the remainder of the system the opportunity to settle into some kind of spatial order.) This way of thinking is better able to grapple with what are called “non-equilibrium” conditions. Entropy retains its proper meaning, and we gain a better understanding of why the Second Law is true.

There is much more that can be said, but I think this is the essence of the problem.

eric · 11 November 2008

Your not confused, I was lazy and used the equation for a reversible state change. You are right, its dS >= dq/T for the much more common case where your state change may be irreversible.
Stephen Wells said: Should that not be ds > dQ/T ? Or am I confused?

Science Avenger · 11 November 2008

iml8 said: I felt that allowing the troll and those who liked to argue with him to have at it in their own little corner seemed to be a nice compromise in light of the fact that PT is incapable of enforcing bans. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html
Why is it incapable? If they don't have the machinery to automatically junk his posts before they appear, why can't they just delete them as they appear as PZ does? There are a lot more of them than there are of him, and eventually he'll get tired of typing to himself. Hell, I'll volunteer to take a shift at troll cleaning.

iml8 · 11 November 2008

Science Avenger said: Why is it incapable?
Beats the heck out of me, you're asking the wrong person. But history shows beyond any reasonable arguement that it is. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

Mike Elzinga · 11 November 2008

stevaroni said: While we're at it, can somebody explain the entropy units - J/K? Joules/Kelvin is not an intuitive unit for me, and I can't quite wrap my head around exactly what that would mean.
Stevaroni, Basically the reason for the units is that entropy is also related to other thermodynamic variables (e.g., enthalpy , pressure, volume, as well as others). The Boltzmann expression for entropy is simply S = kB ln(omega), where kB is Boltzman’s constant in units of joules per Kelvin, and omega is the number of available energy states. The connections to other thermodynamic variables allow chemists and engineers to find entropy from other measurements of a thermodynamic system. But more deeply, it is related to temperature because temperature turns out to be a measure of the average kinetic energy per degree of freedom of the constituents of a thermodynamic system. The actual connection is E = kBT (or some half integer multiple of this for each possible way a quantum mechanical system can contain energy). Thus, the heat content of a system is the total energy contained in the system, while its temperature is the average energy per degree of freedom. This means for example that, if a system has a total energy content distributed over a given number of degrees of freedom, suddenly increasing the number of degrees of freedom for the same total energy content will lower the temperature of the system. This is called adiabatic cooling, and a good example is adding salt to ice in order to break molecular bonds among water molecules and free up more ways for the molecules to move and vibrate. As to the units of entropy, which follow from Boltzman’s constant (the logarithm of the number omega is dimensionless), it is simply a way of determining the amount of energy within a given temperature range by multiplying it by the number of available energy states in that range (actually the logarithm of the number because the number is usually very large). This is what connects the number of available energy states to other thermodynamic quantities that also involve the measurement of energy or temperature, or volume or pressure, or whatever else is available to measure in the lab. I’m trying hard to avoid math formulas here (partly because there is no mechanism for producing math in these comments, but more because the fundamental ideas are actually more important than the detailed mathematical techniques for computing them).

David Hudson · 11 November 2008

Is it possilbe to apply Morris's concept of entopy to himself? In that case, his brain must have been in complete order at birth, but by now has, by his definition,reached a state of near total disorder.

beckster02 · 11 November 2008

If creationists can argue that evolution violates the 2nd law of thermodynamics, can't evolutionists also argue that creation violates the 2nd law of thermodynamics?

I mean, if they want to maintain that the 2nd law is inviolable, then how do they deal with the fact that God seemingly violates it in Genesis by creating order out of chaos?

And if they respond that God can violate the law if God wants to, then it is equally possible that God could also be creating by evolution--making the 2nd law of thermodynamics irrelevant!

iml8 · 11 November 2008

beckster02 said: If creationists can argue that evolution violates the 2nd law of thermodynamics, can't evolutionists also argue that creation violates the 2nd law of thermodynamics?
This is very amusing (it is!) but ... remember that it takes a surgical operation to get the comprehension of an irony into the head of a lunatic-fringer. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

Eric Finn · 11 November 2008

I think the equality dS=dQ/T still holds.
eric said: Your not confused, I was lazy and used the equation for a reversible state change. You are right, its dS >= dq/T for the much more common case where your state change may be irreversible.
Stephen Wells said: Should that not be ds > dQ/T ? Or am I confused?
Consider two bodies at two different temperatures and in thermal contact with each other. Energy flows from the hotter body to the colder body as they approach a common temperature. Since the hotter body looses energy, the change in the entropy is negative. Similarly, the entropy of the colder body increases. In this example we assume that the amount of energy dQ given out by the hotter body is received by the colder body (no other energy states are available). However, the hotter body gives out energy at a higher temperature than the colder body receives it, and since dS=dQ/T, the decrease of entropy in the hotter body is less than the increase of entropy in the colder body. The total change of entropy in this system of two bodies is positive. We may conclude that this process is irreversible. The reverse process will not happen spontaneously. Regards Eric

kc · 11 November 2008

beckster02 beat me to it...

Don't let them have their cake and eat it to - make them explain the thermodynamics of creation.

SWT · 11 November 2008

In thermodynamics, we call a process "reversible" if it is never more than differentially away from equilibrium. Entropy is defined by dS = (1/T) dQ for a reversible change, so that if you want to calculate the change for a finite state change, you have to integrate (1/T)dQ over a reversible path connecting the initial and final states of the system.

And let me pile on with another point that Mike Elzinga made above -- the definition of entropy is all about heat and temperature for reversible processes. Entropy is not defined in terms of order, and thermodynamic entropy (you know, the kind that's governed by the second law) is not defined in terms of information.

Mike Elzinga · 11 November 2008

However, the hotter body gives out energy at a higher temperature than the colder body receives it, and since dS=dQ/T, the decrease of entropy in the hotter body is less than the increase of entropy in the colder body. The total change of entropy in this system of two bodies is positive.

— Eric Finn
From a microscopic perspective, we have the total energy of both bodies distributed over more energy states. Suppose for example the bodies are two simple, identical solids that contain their thermal energy in the form of lattice vibrations, i.e, the atoms that make up the solids vibrate in place in 3-dimensions. Each dimension for each atom represents a degree of freedom which is also an available energy state. In the case of the body at lower temperature, these vibrations are not as large and hence do not contain as much kinetic energy as those in the hotter body. The kinetic energy for each degree of freedom is lower in the colder body (say E = kBT for each degree of freedom). The reason energy flows from the hotter to the colder body when they are in contact is because the momentum transfers from the molecules of the hotter body in the direction of the colder body are larger than in the reverse direction. Thus momentum is transferred in the direction of the colder body and distributed among the molecules of the colder body until momentum transfers are equal in every direction. This continues until equilibrium when the temperatures of the two bodies are equal. Now we have a situation in which the difference in the original total energies of each solid is now distributed over more energy states (twice as many if the solids are identical), thus the number of energy states for that difference of energy has increased, i.e., entropy has increased. (If in doubt, consider a special case in which all the energy is in the hot body and none is in the cold body.)

We may conclude that this process is irreversible. The reverse process will not happen spontaneously.

And this raises an important point about irreversibility or spontaneous increases in entropy. As mentioned above, momentum transfers take place in the direction of the colder body until equilibrium is achieved. However, statistical fluctuations can conspire to temporarily cause momentum transfers in an opposite direction from cold to hot, but only on very short time scales until they are quickly squelched by the overall flow in the hot-to-cold direction. Such fluctuations can be used to study the internal mechanisms of such systems. For example, the size of molecules can be estimated from the Brownian motion of much larger particles being buffeted about by statistical collusions among atoms bombarding the particle from one side by measuring the size and frequency of the particle’s deviations in its motion. So we see from Eric’s nice example that the classical macroscopic and quantum microscopic perspectives are consistent. This kind of exercise is good pedagogy.

SB · 12 November 2008

Large entropic fluctuations are common place ... by design.

"there's about a trillion times more entropy flux available than is required for evolution."

So if a random event occurred that all the "entropy flux" available for the entire universe were concentrated into an area of one trillionth the size of the universe there would be just enough entropic fluctuation for life? Add in probability statistics to the equation and the given equation is meaningless.

eric · 12 November 2008

What are you talking about? Heat radiation, absorption and re-radiation will occur in any two-body system in thermal contact. This includes almost all star-planet systems. So the event isn't random. Also, nothing is being concentrated on the earth - the sun emits radiation in all directions. Third, the output of the entire universe is irrelevant; we're just talking one star here. Fourth, its not "just enough" - its 1,000,000,000,000 times more entropy flux than is needed. Did you not understand the trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K?
SB said: Large entropic fluctuations are common place ... by design. "there's about a trillion times more entropy flux available than is required for evolution." So if a random event occurred that all the "entropy flux" available for the entire universe were concentrated into an area of one trillionth the size of the universe there would be just enough entropic fluctuation for life? Add in probability statistics to the equation and the given equation is meaningless.

Dan Styer · 12 November 2008

Mike Elzinga said: temperature turns out to be a measure of the average kinetic energy per degree of freedom of the constituents of a thermodynamic system. The actual connection is E = kBT (or some half integer multiple of this for each possible way a quantum mechanical system can contain energy). Thus, the heat content of a system is the total energy contained in the system, while its temperature is the average energy per degree of freedom.
In fact, the formula is E = (1/2)kBT. And it holds true only for systems which are (1) classical (2) non-interacting and (3) where each "degree of freedom" contributes a quadratic term to the energy (for example, kinetic energy does because the energy is (1/2)mv2, vibrational energy does because the energy is (1/2)kx2, but gravitational energy mgz does not).

Stephen Wells · 12 November 2008

I've read SB's comment three times now and I still can't find any actual meaning it it. We need better trolls.

Dan Styer · 12 November 2008

SB said: Add in probability statistics to the equation and the given equation is meaningless.
Which "given equation" are you referring to? And to which equation do you wish to "add in probability statistics"?

TomS · 12 November 2008

snaxalotl said: ... I was going to suggest that for most creationists it's best to just say "do you realise 2LOT is an actual equation with numbers and symbols and such"?, ...
I like that. "... So, could you show your calculations?"

daijiyobu · 12 November 2008

One of my favorite abuses of thermodynamics is by the pseudomedicalists known as naturopaths -- but, instead of employing such in an antievolution kind of way, employ such in a pro-vitalism way.

E.g., in the "Textbook of Naturopathic Medicine" (ISBN 9780443073007; 3rd ed., 2006), Bradley, R.S. (ND NCNM 198x, DHANP, CCH) -- a doubly board-certified homeopath naturopath & author of the book's "Chapter 06 - Philosophy of Naturopathic Medicine," who practices in Nebraska -- states

['danger, will robinson...pseudoscience!!!']:

"the foundations of naturopathic medical philosophy are found in vitalism [p.080...] the philosophy of vitalism is based on the concept that life is too well organized to be explained simply as a complex assemblage of chemical and physical reactions [...] 'homeostasis' is the most dramatic general argument in favor of vitalism [...] a less dramatic argument used to support the vitalistic perspective is the 'problem of entropy' [p.081]."

Fascinating, in terms of science-illiteracy.

-r.c.

Mike Elzinga · 12 November 2008

Dan Styer said:
Mike Elzinga said: temperature turns out to be a measure of the average kinetic energy per degree of freedom of the constituents of a thermodynamic system. The actual connection is E = kBT (or some half integer multiple of this for each possible way a quantum mechanical system can contain energy). Thus, the heat content of a system is the total energy contained in the system, while its temperature is the average energy per degree of freedom.
In fact, the formula is E = (1/2)kBT. And it holds true only for systems which are (1) classical (2) non-interacting and (3) where each "degree of freedom" contributes a quadratic term to the energy (for example, kinetic energy does because the energy is (1/2)mv2, vibrational energy does because the energy is (1/2)kx2, but gravitational energy mgz does not).
Indeed, Dan. As I mentioned in one of my comments above, I am trying very hard to stick to the fundamental essence of the issue without using math. Most of my experience with the pedagogical aspects of stuff like this, especially with people who bring misconceptions and math phobias into the discussion, is to lay out some very simple ideas that won’t lead to roadblocks farther down the road. In the case of these thermodynamics issues, particularly in the context of these discussions about its application to life, I try very hard to avoid arcane details like Bose-Einstein, and Fermi-Dirac statistics, allowed or “forbidden” states, integer multiples of one-half, the details of quadratic potentials, etc., etc.. These, if they can be discussed at all with the layperson, can be dealt with later. And I am well-aware of the perils of simplifications and metaphors that are often used to bridge understanding. There has been over 40 years of formal study of these issues by the Physic Education Research community (although I don’t always agree with the methods they propose to deal with some of these issues). Most of what I have found that works with students (I have to admit, however, that I have been spoiled with some very, very bright students), is to do what we in the research community often do, namely, drop all the multiplying constants, stick to the fundamental ideas, make a few back-of-the-envelope calculations if needed, and, in general, be sure we are understanding the basic mechanisms. After that, we then go back in and fold in the details (some of which can make big differences in specific outcomes, but that is also an important step in understanding). As another commenter mentioned above, even some of the smallest details of the math intimidate many laypeople and shut down comprehension. But an outline of fundamental ideas can be of great help. On the other hand, good pedagogical intentions along these lines have often led to surprising misconceptions on the part of the layperson. The use of order/disorder to explain entropy has probably been one of the most disastrous. I think we all recognize where this model for explaining entropy comes from, but the diagrams used to describe the pigeonholes for the various ways of populating energy states and then applying the statistical counting methods appears to have lead to metaphors of physical objects being scattered among various spatial locations. From that to various arrangements of colored balls we find the confusions compounded, and then we find, to our dismay, charlatans exploiting misconceptions and emotions associated with chaos to turn science against itself. I remember Victor Weisskopf once advising us to stick to the ideas first and then bring in the mathematical details later. And I certainly recall that his presentations were masterpieces of clarity. So, this awareness has been around for some time. And it has often been said, somewhat jokingly, that using mathematics is a way to impress yourself that you understand physics when you don’t.

Sylvilagus · 12 November 2008

Hey Mike - Thanks for the posts. You've helped me see that I have a number of misconceptions about thermo myself. Its been a long time since college physics for me. I wonder if you could recommend a good book for a reasonably scientifically literate layperson on thermodynamics? By the way, was it you who posted quite a while ago on dendritic formations in ice crystals as an analogy for evolution? I found that fascinating and used the analogy once or twice in discussions with creationists. I'd like to read more about that too.

Sylvilagus · 12 November 2008

eric said:
Sylvilagus said: the most successful approach I've found is to show them that the 2nd law is a mathematical equation and the mathematical definition of entropy, to point out that entropy is, at least in principle, a value that can be calculated, or at least estimated. I then ask them how they know that evolution breaks the 2nd law, where the calculations are that show this.
Sylvilagus, have you had any luck pointing out that the law has no "out" for intelligence? Write dS = dQ/T on the board and ask the student to show where the exception for intelligence occurs. I.e. leading class discussion to the conclusion that there isn't one, therefore "intelligent design" cannot explain anything breaking the 2nd law. In a rational world (I know, I'm daydreaming) this could lead to the understanding that the laws of thermodynamics do not forbid nature from doing anything that humans can do, because there are no exceptions for intelligent action.
I've tried this but not with much success, though I'm not quite sure why. For example, in the case of gravity they understand that airplanes are not "breaking" the law of gravity. They are merely harnessing other forces to work against gravity. I think they see "life" and "intelligence" as doing something similar: working against entropy, not really breaking the law. They typically respond to a suggestion like yours with something like that: life and intelligence have a property which enables them to work against it, simply begging the question of whether that something is supernatural or a natural emergent property of the larger thermo system. They assume its supernatural. Completely circular logic they seem to want to stay in. The advantage of the other approach I described is that it avoids conceptual argument and merely forces them to acknowledge that there "ain't no real science there" in their sources. They don't understand the thermo at all anyway, but they can understand that real thermo is quantitative and real scientists calculate it, not make vague conceptual analogies. Once they understand that thermo is quantitative in principle its pretty easy to get them to see the sort of calculations or estimates that would prove their point. I then ask them to find the "creation scientist" that has done this calculation. Doesn't take grants; doesn't take genius; doesn't take a lab. Especially if, as they point out, it is so "obvious" that evolution violates thermo it ought to be easy to make the calculations. The glaring absence of such work really tends to undermine their confidence in their sources, if they are intellectually honest as some actually try to be.

eric · 12 November 2008

Sylvilagus said: ...I think they see "life" and "intelligence" as doing something similar: working against entropy, not really breaking the law. They typically respond to a suggestion like yours with something like that: life and intelligence have a property which enables them to work against it, simply begging the question of whether that something is supernatural or a natural emergent property of the larger thermo system. They assume its supernatural. Completely circular logic they seem to want to stay in.
Thanks for your response. Your approach makes a lot more sense than mine. Your description (of how the students respond) is really interesting, in that "work" in the formal sense is exactly what's employed. Its unfortunate, however, that they don't understand that natural processes can do work without intelligence or supernatural causation. Maybe what's needed is - prior to discussing the laws of thermodynamics - an understanding of the concept of work. That way if they intuitively respond that work is needed to to reduce entropy, they have the conceptual tools to understand how nature can do that.

Henry J · 12 November 2008

One approach that avoids the technical details and math would be to simply point out that with 100,000 or so biologists using the theory in their daily work, if the theory didn't match reality, a large fraction of them would have noticed it a long time ago.

Another thought is that both thermodynamics and evolution are empirically based conclusions; the fact that some principles of thermodynamics are referred to as "laws" doesn't give them authority over the other subject.

Henry

Mike Elzinga · 12 November 2008

Sylvilagus said: Hey Mike - Thanks for the posts. You've helped me see that I have a number of misconceptions about thermo myself. Its been a long time since college physics for me. I wonder if you could recommend a good book for a reasonably scientifically literate layperson on thermodynamics? By the way, was it you who posted quite a while ago on dendritic formations in ice crystals as an analogy for evolution? I found that fascinating and used the analogy once or twice in discussions with creationists. I'd like to read more about that too.
Sylvilagus, Yeah, I was making those analogies of the evolution of life with the evolution of dendritic forms. I don’t know where I got them; I suppose I just thought they were common knowledge (in my world anyway; but then my world might be pretty small). But they seemed compelling and sort of obvious to me; and the evolution of dendritic formations has come up often in some of my own research. So I am afraid I have no book recommendations that jump to mind at the moment. In the case of thermodynamics, there are so many bad and good books out there that I feel I must be a bit cautious in my suggestions. One of the more recent elementary books that self-consciously deals with the issue of entropy being a “multiplicity of states”, rather than as order/disorder, is part of a series of short books published by WCB/McGraw-Hill called Six Ideas that Shaped Physics. Unit T in that series is written by Thomas A. Moore of Pomona College, entitled “Some Processes are Irreversible”. I have one of the preliminary versions of the text, but I think there is a more recent version out. I think Moore has picked up an additional author or two. Part of the purpose of this series is to take advantage of some of the pedagogical research that has taken place in the Physics Education Research community over many years. As to statistical mechanics and thermodynamics texts, I guess that Frederic Reif’s book Fundamentals of Statistical and Thermal Physics as been one of my personal favorites, but it is not perfect either (I suspect there are no really “perfect” ones out there; authors pick their own favorite topics). Other books in my personal library that I have used or studied from are: Heat and Thermodynamics by Mark W. Zemansky Thermal Physics by Charles Kittel Thermodynamics Enrico Fermi Thermodynamics and Statistical Mechanics by Arnold Sommerfeld Statistical Mechanics by Richard Feynman Statistical Mechanics by Kerson Huang Statistical Physics by Landau and Lifshitz The Principles of Statistical Mechanics by Richard C. Tolman But I should also add that many of the insights in the above texts are enhanced by the study of condensed matter physics and atomic and molecular optics. Two of the best books I know about and have used are Solid State Physics by Ashcroft and Mermin (my favorite) Introduction to Solid State Physics by Charles Kittel (I have the 5th edition, but I am sure there is a later edition). And a somewhat more advanced book, Principles of the Theory of Solids by J.M. Ziman. These books all help, as do the many books for applications (e.g., Sze or Yarriv). But there is no substitute for actually working in the lab where these fundamental ideas are used routinely. That’s when one really comes to understand them. As far as popularizations are concerned, most on thermodynamics are bad. The most recent I know about is Peter Atkins’ Four Laws That Drive the Universe. I would rate it as ok, but I have reservations about several parts of it. Richard Feynman’s QED is still an excellent popularized stepping stone to thinking about energy states from the perspective of quantum electrodynamics. Quantum electrodynamics laid the foundation for some of the current thinking about extending the “Standard Model” in physics, and Frank Wilczek’s recent book, The Lightness of Being gives some interesting insights into that line of thinking.

Simplicio · 12 November 2008

You must remember that creationists do not only challenge empirical knowledge, they challenge reality as we know it, willing to go back not before Aristotle, but before that even.

If you're willing to go back to one disproved idea, you're going to go back until you get to other mythical belief. Somehow they stop with the myths written down a couple of thousand years ago, and don't consider the great mythical and religious texts of Egyptians and Babylonians valid, even though Utnapishtim survived the great flood 3000 years before Noah and was granted immortality by the gods, and Horus child has been on the lap of Isis for 5000 years atleast. El, or later Yahweh isn't a good god, nor is Christ when his prophet St. Paul "interprets" him. They're evil gods, belonging to a different age.

Today there are people like Abraham Lincoln, Vladimir Lenin, and all sorts of people who are just as great as Imhotep, the architect who designed and built the pyramid of Djozer. Abe wasn't as honest as they say, Lenin wasn't as good as they say, and Imhotep only designed the step pyramid of Djozer, he was the chief priest of Ammon-Ra in the court of Djozer.

You don't doubt clergymen like Gaius Julius Caesar, only after Octavius, his foster-son's long rule that the idea of emperor was challenged, but not enough. And what resulted was the decline of the Roman Empire when somehow the power was with the rich and the stupid, culminating in the adoption of christianity as a forced religion on all people by Constantinus of Byzantium.

Simplicio · 12 November 2008

I do not need to point out that all comments here are self-evident to anyone versed in the history of science. They've been so long given back to the basic premise of religious belief, it's not true. Religion is belief without proof, only tradition and crazed people (prophets). Science is knowledge from proof, crazy people are ruled out if they cannot come up with any proof. Karl Marx was more a prophet, his proof didn't live up to scrutiny, nor the test of time. Social science is difficult, but socialism isn't dead. For example Americans today would be a horror to 19th century Democrats. Social security? Communism! Workers' unions? Communism!

Mike Elzinga · 12 November 2008

Another thought is that both thermodynamics and evolution are empirically based conclusions; the fact that some principles of thermodynamics are referred to as “laws” doesn’t give them authority over the other subject.

— Henry J
And, man, you can really see that in Morris’ shtick that has been linked to at the top of this thread. In addition he attempts to use etymology to hammer home his own misconceptions as being supported by the authority of the dictionary. This has been such a boringly repeatable part of the song-and-dance routines of the ID/Creationists; hermeneutics, exegesis, etymology, micro-analyzing the roots of words in other languages. But never ever do they check with reality and the way the concepts are actually used and are interlocked with the entire structures of scientific understanding.

eric · 12 November 2008

Mike Elzinga said: This has been such a boringly repeatable part of the song-and-dance routines of the ID/Creationists; hermeneutics, exegesis, etymology, micro-analyzing the roots of words in other languages. But never ever do they check with reality
Checking with reality would set a bad precedent in which people are expected to show their ideas conform to reality. Not to mention it would cause some disputes to be resolved. Which means some flavor of Christianity is shown to be wrong. We can't have that; it's bad for the big tent.

Eric Finn · 12 November 2008

The second law of thermodynamics makes a very strong statement. The key concept associated with this statement is entropy. Metaphors and analogies are often used to clarify concepts. Mixing coloured balls may be helpful in presenting some aspects of the concept of entropy, but it also is prone to create misconceptions. I have a training of a physicist, but still my understanding has greatly benefited from the posts by Mike Elzinga.

If one wishes to re-define the concept entropy, it is no more allowed to apply the strong result of the second law of thermodynamics in that discussion. The attacks against the theory of evolution by using arguments related to entropy appear to fall in this category.

The nice order-of-magnitude calculation by Styer shows clearly that evolution may happily proceed its way, as far as thermodynamical entropy or the second law of thermodynamics is concerned.

I wonder, if it is possible to make any kinds of estimates of the differences between the entropies of mammals and, let us say fish. My impression is that mammals do increase the entropy of their environment more that fish do, but does that imply a lower or higher level of entropy internally? Mammals retain their constant body temperature by using a large portion of their energy input for this purpose. Maybe it is reminiscent to some governmental offices concentrating more on bureaucracy that on actual work :)

Regards

Eric

sylvilagus · 12 November 2008

eric said: Your description (of how the students respond) is really interesting, in that "work" in the formal sense is exactly what's employed. Its unfortunate, however, that they don't understand that natural processes can do work without intelligence or supernatural causation. Maybe what's needed is - prior to discussing the laws of thermodynamics - an understanding of the concept of work. That way if they intuitively respond that work is needed to to reduce entropy, they have the conceptual tools to understand how nature can do that.
Actually, I should clarify. These responses are (sadly) as much from creationist teachers (!) and other adults I have encountered as they are from students. I am currently a high school teacher, but my science teaching experience consisted of working in a small alternative high school. I am not a science teacher by training (actually I'm an anthropologist)I just merely happened to know basic science well enough for a basic high school curriculum in an area where they are desperate (I started out as a physics major long ago). Since then I've moved on to teaching in areas I actually have professional knowledge of. The topic does of course come up in anthro classes. Anyway, more to the point of your post. I agree that introducing "work" into the discussion is the way to go in a true science class/discussion. But I haven't usually had that luxury. My approach, say in anthro, is to take just enough time to address the creationist claims so that I can get on and teach about reality. Usually my creationist students have not overly pressed the issue. With the creationist teachers though I try to keep them on the defensive. My approach above does that. They have made it clear that they don't want to actually learn or pursue truth, they merely want to appear intellectually respectable enough in their own eyes and the eyes of others so that they don't feel like utter fools spouting the myths that they do. My approach short circuits this. Rather than get into a conceptual debate which only reinforces their sense of intellectual respectability, I ask them to find the science that supports their claim... after a while they grow less and less likely to voice their claims in public let alone try to present them as worthy of "equal time". In my experience most creationists are like this. It helps to explain otherwise bright people like Dembski. They grow up knowing that most smart students and teachers look down upon them because of their's and their families' fundamentalist beliefs, so to protect their egos they apply their intellectual skills to self-defense... not truth, but defense. They become very good at "arguing" but not very good at "understanding" because their goal is to appear intelligent, not to find truth. This is the essence of Phillip Johnson: a lawyer is the best model for the creationist mindset. Argument and rhetoric trumps truth. Once, I did have one teacher actually express interest in learning why the thermo argument is wrong. I approached it with him much the way you are describing. In the end he accepted that his "arguments" were merely non-scientific metaphors for something he felt intuitively and that they didn't really stand up to scientific scrutiny. This didn't change his mind about evolution... it just has to be wrong. Other wise he would have to reject the faith of his parents and his church community. This is actually a bright guy, but for some people it is easier to maintain cognitive dissonance than to confront social dissonance. Sigh. I suppose we all do that with some issues at some points in our lives but it takes a very desperate person to bulwark their social reality by claiming to know better than the entire scientific community, despite having no good, expressable reason for believing so.

Mike Elzinga · 12 November 2008

They become very good at “arguing” but not very good at “understanding” because their goal is to appear intelligent, not to find truth. This is the essence of Phillip Johnson: a lawyer is the best model for the creationist mindset. Argument and rhetoric trumps truth.

— Sylvilagus replying to eric
This is certainly consistent with the popularity of debate at places like Liberty “University” and some of the other politically active sectarian schools. They flock to it as to a killing sport, complete with game face, cheerleading, and the psychological game-playing prior to world championship boxing matches. It is also reflected in their anger at Judge Jones and at the judges in other court decisions that have gone against them. In their minds, the court is a place where choreographed debates go on and the judge decides base on debating points. They apparently haven’t learned about evidence and cross-examination under oath. And this tactic also fails them in scientific peer review. It also is consistent with the complete babbling we see in some of the fundamentalist ID/Creationists who are asked for evidence. They don’t seem to know what the word means. Instead we see exegesis, hermeneutics, etymological games, and quotes from their holy book. They seem to be stuck in the agonizing scholasticism of the Middle Ages when Aristotelian logic ruled and objectively verifiable evidence was irrelevant. We see this especially in those sects that have deep roots in Calvinist doctrine. Many of them like to refer to themselves as “Reformed” (which seems to mean that they believe they have the one, true doctrine and reading of their scriptures).

Mike Elzinga · 12 November 2008

I wonder, if it is possible to make any kinds of estimates of the differences between the entropies of mammals and, let us say fish. My impression is that mammals do increase the entropy of their environment more that fish do, but does that imply a lower or higher level of entropy internally? Mammals retain their constant body temperature by using a large portion of their energy input for this purpose. Maybe it is reminiscent to some governmental offices concentrating more on bureaucracy that on actual work :)

— Eric Finn
This is an interesting idea, but I suspect it is far more complicated than it looks at first glance. I remember many years ago an article in Scientific American magazine containing a dramatic plot of the efficiencies of traveling animals and machines. I have tried to find that plot in my files, but I no longer seem to have it. As I remember it, it had the energy consumption per unit mass per unit distance traveled plotted against mass. Small creatures such as shrews and humming birds were in the far upper left-hand portion of the graph, i.e., they burned tremendous amounts of energy per unit mass per unit distance, had small masses (and large surface area to volume ratios). Scattered throughout the graph were various other animals and machines, including fish, helicopters, jet fighters, automobiles, cheetahs, elephants, etc.. But the most interesting was the one at the very lowest level of the plot, well below all the others. It was man on bicycle. So much of this depends on the means of locomotion, relative differences in body temperature to environmental background, fur, feathers and other types of insulation, body shape (aerodynamics or hydrodynamics).

Eximus · 12 November 2008

Point up, then laugh. If one believes you're pointing at God, they aren't a Christian. If they believe you're pointing at the sun, they aren't a scientist.

SB · 13 November 2008

eric said: What are you talking about? Heat radiation, absorption and re-radiation will occur in any two-body system in thermal contact. This includes almost all star-planet systems. So the event isn't random. Also, nothing is being concentrated on the earth - the sun emits radiation in all directions. Third, the output of the entire universe is irrelevant; we're just talking one star here. Fourth, its not "just enough" - its 1,000,000,000,000 times more entropy flux than is needed. Did you not understand the trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K?
SB said: Large entropic fluctuations are common place ... by design. "there's about a trillion times more entropy flux available than is required for evolution." So if a random event occurred that all the "entropy flux" available for the entire universe were concentrated into an area of one trillionth the size of the universe there would be just enough entropic fluctuation for life? Add in probability statistics to the equation and the given equation is meaningless.
Yes, I understand how the logic of "trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K" is flawed and misused.

SB · 13 November 2008

Simplicio said: You must remember that creationists do not only challenge empirical knowledge, they challenge reality as we know it, willing to go back not before Aristotle, but before that even. If you're willing to go back to one disproved idea, you're going to go back until you get to other mythical belief. Somehow they stop with the myths written down a couple of thousand years ago, and don't consider the great mythical and religious texts of Egyptians and Babylonians valid, even though Utnapishtim survived the great flood 3000 years before Noah and was granted immortality by the gods, and Horus child has been on the lap of Isis for 5000 years atleast. El, or later Yahweh isn't a good god, nor is Christ when his prophet St. Paul "interprets" him. They're evil gods, belonging to a different age. Today there are people like Abraham Lincoln, Vladimir Lenin, and all sorts of people who are just as great as Imhotep, the architect who designed and built the pyramid of Djozer. Abe wasn't as honest as they say, Lenin wasn't as good as they say, and Imhotep only designed the step pyramid of Djozer, he was the chief priest of Ammon-Ra in the court of Djozer. You don't doubt clergymen like Gaius Julius Caesar, only after Octavius, his foster-son's long rule that the idea of emperor was challenged, but not enough. And what resulted was the decline of the Roman Empire when somehow the power was with the rich and the stupid, culminating in the adoption of christianity as a forced religion on all people by Constantinus of Byzantium.
I can challenge any empirical data you wish to post. It maybe surprising to some that the foundation of "spontaneous evolution" is not built on empirical science. Spontaneous evolution = life from non-life Addition link to " Not so Random Evolution" (empirical research from Princeton U: http://www.dailygalaxy.com/my_weblog/2008/11/princeton-team.html Epigenetics: http://en.wikipedia.org/wiki/Epigenetics

eric · 13 November 2008

SB said: Yes, I understand how the logic of "trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K" is flawed and misused.
Well, I don't. Your first post was a bit unclear on that point. So if you could provide an explanation on how its flawed and misused, I'd appreciate it. I'm particularly interested in why you think a 10E12 excess over what's hypothetically needed is "just enough entropic fluctuation for life."

SB · 13 November 2008

eric said:
SB said: Yes, I understand how the logic of "trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K" is flawed and misused.
Well, I don't. Your first post was a bit unclear on that point. So if you could provide an explanation on how its flawed and misused, I'd appreciate it. I'm particularly interested in why you think a 10E12 excess over what's hypothetically needed is "just enough entropic fluctuation for life."
Entropy and its distribution is governed by the laws of probability in a random set of events in a system, the level of the entropic fluctuation in the system is dependent on the total energy and level of initial order of the system. The chance of a fluctuation drops off exponentially relative to its size. For an example, place a sugar cube in a glass of H2O, the cube dissolves at a rate dependent on the temperature, the organization of the sugar always decreases. Fluctuations in entropy may cause the sugar to dissolve unevenly but fluctuations will not cause entropy to reverse. An entropic fluctuation posed by the logic stated by the poster’s equation would be similar to placing a teaspoon of sugar in a glass of H2O and have it form a sugar cube – the laws of probability will not allow it to happen as a random event. Growing crystals is a bit more complicated but over all the same principles apply, for crystal growth thermal and environmental reactivity properties govern the maximum fluctuation potentials.

Richard Simons · 13 November 2008

eric said:
SB said: Yes, I understand how the logic of "trillionfold order of magnitude difference between 302 J/K and 420 x 10E12 J/K" is flawed and misused.
Well, I don't. Your first post was a bit unclear on that point. So if you could provide an explanation on how its flawed and misused, I'd appreciate it. I'm particularly interested in why you think a 10E12 excess over what's hypothetically needed is "just enough entropic fluctuation for life."
It looks to me as though his understanding of what is available and what is required is backwards.

Paul Flocken · 13 November 2008

daijiyobu said: ...a doubly board-certified homeopath naturopath & author of the book's "Chapter 06 - Philosophy of Naturopathic Medicine," who practices in Nebraska -- states...
The looney bin has boards? Who knew?

Mike Elzinga · 13 November 2008

Entropy and its distribution is governed by the laws of probability in a random set of events in a system, the level of the entropic fluctuation in the system is dependent on the total energy and level of initial order of the system. The chance of a fluctuation drops off exponentially relative to its size.

— SB
This is an important point to start tackling once the concept of entropy (the multiplicity of available energy states) is clear. And it starts becoming important to make the distinctions between the number of energy states available and how energy is distributed among those states. This gets into the various types of distributions (FD, BE, MB) we encounter in statistical mechanics. This forum is probably not the place to do it; non-specialists and laypeople might go cross-eyed with bored confusion, and it might not produce much in the way of enlightenment. There are certainly many mechanical model examples that could be used to illustrate the effects of size and distribution on fluctuations. But it remains extremely important when using such examples to avoid confusing the distributions of physical objects in space with the distributions of energy among available energy states. For example, with those mechanical models that use the positions of balls above a given height as analogs for energy states, it is important to connect those heights to energy (say by using mgh instead of just h for the labeled position). One of the most common mistakes I see in textbooks and popularizations is sloppiness about the use of the words order and disorder. An author (Peter Atkins in his Four Laws that Drive the Universe for example) will be talking about the distribution of energy among states, use the words order or disorder, and then perhaps throw in an example to illustrate distributions that uses objects arranged in some kind of spatial ordering. They then return to the energy discussion using the same words, but they never remind the reader that there is a distinction between spatial order and the numerical ordering of the amounts of energy among the various classical or quantum mechanical mechanisms that can contain energy. I have been convinced for many years now that the topics of thermodynamics and statistical mechanics could really benefit from some concentrated pedagogical innovation and clarification. But apparently it has not been a high priority in the physics and engineering communities. So many courses in thermo are essentially plug-and-chug courses and don’t deal with statistical mechanics. Classical thermo courses tend to make entropy sound very mysterious. I hear this complaint more from the engineers than I do from the physicists. Some of those innovations could include some history. Early physicists and engineers recognized that heat at high temperatures was more “effective” in doing work than heat at low temperatures. So there was already an intuitive connection between heat and the temperature at which it was used. It didn’t take too many steps to get to dQ/T in classical thermo. Boltzmann’s expression is another matter altogether. Connecting microscopic states to macroscopic states was a step-by-step process as Boltzmann, Gibbs, Maxwell, and others built mechanical Newtonian models to account for the places where “internal” energy is stored. Later developments in quantum mechanics added the FD and BE distributions that began to correct some of the inconsistencies that classical models produced for solids, liquids, and gases.

Kevin B · 13 November 2008

Is "SB" attempting to argue some sort of analogue of Dembski's "too improbable" claims?

If so, SB's "dissolving sugar" scenario contains the seeds of its own refutation. While it would take some careful setting up to reform the sugar cube, getting the sugar back out of solution is easy - you just have to stand the glass of sugar solution in strong sunlight and wait for the water to evaporate!

SB seems to be viewing the recrystallisation as a single "fluctuation", when the "unit of fluctuation" is actually the transfer of a single water molecule from the liquid phase to the gas phase.

eric · 13 November 2008

SB said: An entropic fluctuation posed by the logic stated by the poster’s equation would be similar to placing a teaspoon of sugar in a glass of H2O and have it form a sugar cube – the laws of probability will not allow it to happen as a random event. Fluctuations in entropy may cause the sugar to dissolve unevenly but fluctuations will not cause entropy to reverse.
You mean I can't get crystallized sugar back? That will be news to cooks. Its easy - you boil the water. i.e. Add heat. Like what the sun does. Your example illustrates exactly the creationist problem. You analogize the earth to a system in near-complete thermal equilibrium with its environment, exchanging practically no mass or heat with its surroundings. You may say "open system" in mixed company, but you model like its closed. Also, Mike E discussed in several very excellent posts how entropy is about energy states, not atomic lattice arrangement like your example. You should read them.

Larry Boy · 13 November 2008

Mike Elzinga said: But it remains extremely important when using such examples to avoid confusing the distributions of physical objects in space with the distributions of energy among available energy states.
I ran into a good example of this when discussing entropy the other day. If we consider a large number of masses randomly distributed through space, and interacting only by gravitation, then over time all of the masses will end up concentrated at a single point in space. (Excepting masses that attain escape velocity, and remember all orbits are unstable.) So gravity is increasing the spatial ordering of the system, and it seems as if entropy is decreasing if we only use entropy as a fuzzy concept for 'order'.

PvM · 13 November 2008

Is SB Bobby?

Henry J · 13 November 2008

I really doubt it.

DS · 13 November 2008

Lots of big words but a minimum of understanding or learning. Not enough grammatical errors though, but still I guess it is possible. Just ask him to read a paper, that is the best "Bobby test".

Mike Elzinga · 13 November 2008

Larry Boy said:
Mike Elzinga said: But it remains extremely important when using such examples to avoid confusing the distributions of physical objects in space with the distributions of energy among available energy states.
I ran into a good example of this when discussing entropy the other day. If we consider a large number of masses randomly distributed through space, and interacting only by gravitation, then over time all of the masses will end up concentrated at a single point in space. (Excepting masses that attain escape velocity, and remember all orbits are unstable.) So gravity is increasing the spatial ordering of the system, and it seems as if entropy is decreasing if we only use entropy as a fuzzy concept for 'order'.
:-) These are particularly good problems for thinking about this. About a month ago one of my sons and I were driving back from a trip and he raised this very issue. So we simplified the problem to a two-body problem in which an asteroid or planet is in an elliptical orbit around a sun (you could also start with two objects under mutual gravitational attraction that are heading toward each other but with a non-zero impact parameter, or alternatively, there is a small amount of angular momentum in the system). Because the planets or moons in our solar system are in nearly circular orbits (not quite, but they are more nearly circular than they once were), the question we discussed is “How does such an orbit become circular?” Further questions about the meaning of order and entropy come up in this situation, because initially there is only one energy level or state (or so it seems, if you idealize the problem as is often done in textbooks). Just for fun, I’ll toss this out for people to think about if they wish. I don’t want to spoil the fun of thinking it through. Besides, I think I may have taken up a lot of bandwidth with my babbling again.

Science Avenger · 13 November 2008

I'm with DS, let's see if he responds to data, but at this point I'd say no, not quite the same MO. Time will quickly push the confidence to 100%.

Mike Elzinga · 13 November 2008

I should add one last question to my last post.

What is the meaning of “information” in the circular orbits of planets? Recall that circles have been highly significant in the early models of the solar system. In fact, seeing circles in nature often grabs our attention.

So, given that the original orbits weren’t circular (the last post asked how circularity arises), what information do we have? How does this compare, or perhaps better, how is this connected to entropy?

Thinking this through for a relatively simple system highlights the origins of much confusion in the “information”, “order”, “entropy” discussions about formations in our universe and also the nature of living organisms.

SB · 14 November 2008

eric said:
SB said: An entropic fluctuation posed by the logic stated by the poster’s equation would be similar to placing a teaspoon of sugar in a glass of H2O and have it form a sugar cube – the laws of probability will not allow it to happen as a random event. Fluctuations in entropy may cause the sugar to dissolve unevenly but fluctuations will not cause entropy to reverse.
You mean I can't get crystallized sugar back? That will be news to cooks. Its easy - you boil the water. i.e. Add heat. Like what the sun does. Your example illustrates exactly the creationist problem. You analogize the earth to a system in near-complete thermal equilibrium with its environment, exchanging practically no mass or heat with its surroundings. You may say "open system" in mixed company, but you model like its closed. Also, Mike E discussed in several very excellent posts how entropy is about energy states, not atomic lattice arrangement like your example. You should read them.
Crystallized sugar at the bottom of a glass does not have the same level of order as a sugar cube and the energy to boil away the H2O doesn't reside in the sugar cube itself, energy would need to be added to the system from an external source. To reform the sugar cube, energy needs to be introduced to the system, and a designed plan to overcome entropy, and a reason for the effort. The sugar cube analogy is not an attempt to explain the entire universe, it's intension is to simplify a part of complex concept. I fully understand the reactive potential states of thermal dynamic systems. The rebuttal is exactly why the concepts need to be kept simple here.

eric · 14 November 2008

SB said: Crystallized sugar at the bottom of a glass does not have the same level of order as a sugar cube
Entropy and disorder aren't the same thing. See Mikes posts above.
the energy to boil away the H2O doesn't reside in the sugar cube itself, energy would need to be added to the system from an external source.
Exactly! And the external source that adds energy to the Earth's systems is...
To reform the sugar cube, energy needs to be introduced to the system, and a designed plan to overcome entropy, and a reason for the effort.
Poppycock. You need a cube-shaped divot at the bottom of your sugar-water container, and heat. That's it. If you can't conceive of how nature could form a cube-shaped divot without a "plan" or "reason," you may want to ask yourself what shape is left when a pyrite cube gets knocked out of its matrix. Look, maybe we are getting sidetracked. Let's try again. Here is my issue: I fail to see how your sugar cube analogy or your other posts supports any of the claims you made in your original post: that large entropic fluctuations are common by design; that there is something random about the earth absorbing heat from other bodies in space; that entropy flux is being concentrated; or that the paper implies there is just enough entropic flux for life.

Mike Elzinga · 14 November 2008

To reform the sugar cube, energy needs to be introduced to the system, and a designed plan to overcome entropy, and a reason for the effort.

— SB
I think this sentence betrays some of the misconceptions that are characteristic of the ID/Creationists. I would also add that SB’s use of the language of science suggests that he is not familiar with the concepts. The notion that entropy is some kind of barrier that has to be overcome by intelligence has been a deliberate theme that has run through all the creationist and ID literature from at least the time of Henry Morris’ arguments (some of those are linked to at the top of this thread). There was a time back in the 1970s when I thought this was an innocent mistake. However, we all eventually learned that these misconceptions kept being repeated in new venue after new venue even though they had been refuted many times by members of the science community. This is what clued us in to the fact that ID/Creationism is a political movement that has exacerbated the culture wars in this country and added to the conceptual confusions about science in the minds of many laypeople. In regard to thermodynamics, I don’t recall that there was as much trouble with the concept of entropy before the creationists got hold of it and started their intense campaign of misinformation. Now we see conceptual problems even among engineers and non-specialists that were not as extensive back before the 1970s.

Mike Elzinga · 14 November 2008

I should probably add a note here about “entropy flux”.

It’s a useful term provided that one has the detailed technical background to understand what is meant by it.

Flux is a flow of something, usually something material like air or water in the minds of most people. However, it is also used in electromagnetic theory (flux lines) to suggest the “flow” of a field. In that particular case, it represents the flow of charged particles if they were placed in the field.

At another level of abstraction, the flux of heat is a “flow of energy”, but in this case we think of a progression of numbers that represent the amount of energy along a given physical path or, in the case of the internal states of a thermodynamic system, the exchanges of energy among various mechanisms that can contain energy.

In the case of entropy, we enter a level of abstraction that is similar to the concept of hole flow in semiconductors. In the case of entropy flux, we are thinking about the movement of available energy states from place to place or from mechanism to mechanism. In a somewhat analogous sense to holes in semiconductors, these “moving” available energy states are like “pigeonholes” moving around or “opening up” to receive energy. But there is nothing material that is moving around in the case of entropy flux.

One can do similar games with “cold flow” instead of heat flow.

I’m not sure, however, that this use of entropy flux is good pedagogy for the layperson; at least not at the very beginning of learning about entropy. It conjures up material things moving around, which is exactly one of the major misconceptions about entropy, namely that entropy is about spatial order/disorder of material objects. So I would advise caution in its use.

Henry J · 14 November 2008

How about using the simple analogy that increase in entropy corresponds to reduction in amount of useful energy? Put another way, using energy always wastes some of it. That holds whether intelligence is involved or not.

Henry

Mike Elzinga · 14 November 2008

Henry J said: How about using the simple analogy that increase in entropy corresponds to reduction in amount of useful energy? Put another way, using energy always wastes some of it. That holds whether intelligence is involved or not. Henry
Indeed there is a sense in some systems in which the increase in available energy states is analogous to a leaky water tank. If those additional energy states represent places where energy can go and be irretrievable, then, yes, it is. Photons (i.e., heat) going off to infinity or being scattered and absorbed so that they cannot find their way back into the system would be an example. I think the best authors of textbooks are clear at this point in referring to the “degradation of energy” as a result of “increasing disorder”. But here, “increasing disorder” means the random distribution of the energy among these kinds of available states where energy is not easily retrievable. The larger the proportion of those states where energy is non-retrievable, the more that “useful energy is degraded”. But this depends on the type of system we are discussing. It is also the basis for some clever techniques in experimental physics that capture or exploit energy that would otherwise be irretrievable. If one clearly understands the nature of those “leaks” (additional energy states), one can often either prevent them or harness them. Lasers, adiabatic cooling schemes, sonic refrigeration, etc.; there are a whole host of clever schemes that take advantage of things like this. And, more recently, as technology has improved, thermodynamic concepts are being pushed to very short time scales where one can actually study the opening and closing of energy states on the time scales of chemical reactions in very small systems. So the ideas of quasi-static thermodynamics can be used in what were previously thought of as highly non-equilibrium conditions. On short time scales, non-equilibrium thermodynamics simply becomes the study of small systems exchanging energy with adjacent systems, and those energy channels into and out of the system are simply treated as available energy states that “open or close” (become available or unavailable). Thus, believe it or not, the idea of an “entropy barrier” actually can make sense in that it means that access to an energy state is “forbidden” by quantum mechanical rules. However, many times these states can be accessed indirectly by “pumping the system” into other energy states from which the “forbidden” state can be reached. Catalysts can also provide paths to these “forbidden” states.

Stanton · 14 November 2008

Are you aware that sugar cubes are made from either refined sugar cemented together with sugar syrup, in a mold, or simply from a paste of refined granulated sugar moistened with water, in a mold, right? If anything, crystallized sugar, or rock candy, would have a higher level of order than sugar cubes, as the crystallized sugar has been allowed to form large crystals, whereas the sugar cubes have not. Nonetheless, comparing the "order" of rock candy and sugar cubes is like comparing the "order" of quartz crystals and sandstone blocks, especially since you're arguing that one has higher "order" than the other simply because it had access to a mold, while the other did not. In other words, a very weak, if not totally inapt and inappropriate comparison.
SB said: Crystallized sugar at the bottom of a glass does not have the same level of order as a sugar cube and the energy to boil away the H2O doesn't reside in the sugar cube itself, energy would need to be added to the system from an external source. To reform the sugar cube, energy needs to be introduced to the system, and a designed plan to overcome entropy, and a reason for the effort. The sugar cube analogy is not an attempt to explain the entire universe, it's intension is to simplify a part of complex concept. I fully understand the reactive potential states of thermal dynamic systems. The rebuttal is exactly why the concepts need to be kept simple here.

SWT · 14 November 2008

SB,

PZ Myers summarized a paper by Dan Styers that asserts that "quantitative estimates of the entropy involved in biological evolution demonstrate that there is no conflict between evolution and the second law of thermodynamics." (emphasis added)

Do you have a quantitative refutation of Styers's argument? Entropy is a precisely defined, calculable quantity -- vague arguments about "order" don't cut it.

Eric Finn · 14 November 2008

SWT said: SB, PZ Myers summarized a paper by Dan Styers that asserts that "quantitative estimates of the entropy involved in biological evolution demonstrate that there is no conflict between evolution and the second law of thermodynamics." (emphasis added)
Indeed, even when using very generous assumptions, no conflict between biological evolution and the second law of thermodynamics can be found. On the other hand, no claim was made regarding the probability of evolution taking place. Most definitely, one should not interpret the result to indicate that if e.g. the energy flow were to increase, then life would somehow originate more easily. Both are constrained by other factors than by the globally available energy. The origin of life is researched intensively, but still we lack a unifying theory. The theory of evolution appears to describe consistently the conditions, under which we may expect to see biological evolution. There is nothing in contemporary physics to stop transitions, such as fish - amphibian - reptile - mammal from taking place. No "entropy barriers" or otherwise. Regards Eric

sb · 15 November 2008

Mike Elzinga said: I should probably add a note here about “entropy flux”. It’s a useful term provided that one has the detailed technical background to understand what is meant by it. Flux is a flow of something, usually something material like air or water in the minds of most people. However, it is also used in electromagnetic theory (flux lines) to suggest the “flow” of a field. In that particular case, it represents the flow of charged particles if they were placed in the field. At another level of abstraction, the flux of heat is a “flow of energy”, but in this case we think of a progression of numbers that represent the amount of energy along a given physical path or, in the case of the internal states of a thermodynamic system, the exchanges of energy among various mechanisms that can contain energy. In the case of entropy, we enter a level of abstraction that is similar to the concept of hole flow in semiconductors. In the case of entropy flux, we are thinking about the movement of available energy states from place to place or from mechanism to mechanism. In a somewhat analogous sense to holes in semiconductors, these “moving” available energy states are like “pigeonholes” moving around or “opening up” to receive energy. But there is nothing material that is moving around in the case of entropy flux. One can do similar games with “cold flow” instead of heat flow. I’m not sure, however, that this use of entropy flux is good pedagogy for the layperson; at least not at the very beginning of learning about entropy. It conjures up material things moving around, which is exactly one of the major misconceptions about entropy, namely that entropy is about spatial order/disorder of material objects. So I would advise caution in its use.
So then, in your expert opinion, how does your definition of entropic flux apply to the statement: "there's about a trillion times more entropy flux available than is required for evolution." We can't have the definition and its context continue to be a moving target The author is using entropic fluctuations as a mathematical variable pertaining cellular chemistry in the context of the reactive potential of cellular subsystems. Is this a point that can be agreed upon?

Mike Elzinga · 15 November 2008

So then, in your expert opinion, how does your definition of entropic flux apply to the statement: “there’s about a trillion times more entropy flux available than is required for evolution.” We can’t have the definition and its context continue to be a moving target The author is using entropic fluctuations as a mathematical variable pertaining cellular chemistry in the context of the reactive potential of cellular subsystems. Is this a point that can be agreed upon?

— SB
Fair questions. There is actually no inconsistency in what Dan Styer was estimating and the concepts I have been explaining. Dan’s calculation is one of those clever back-of-the-envelope calculations that physicists often do to get at the essence of a problem. By using the classical calculations for computing the entropy changes in the Earth and the universe surrounding Earth in a given second, he is taking advantage of the power of classical thermodynamics to calculate this entropy change without having to know all the microscopic details taking place within “system Earth”. The result is that we find an enormous increase in entropy taking place; and that encompasses everything bundled together, including any subsystems that are decreasing in entropy. Then Dan looks specifically at one of those subsystems (living organisms) that are supposedly decreasing in entropy, and he uses Boltzmann’s expression to estimate how much these systems decrease the entropy. In doing this, he makes a very generous estimate that is bound to overestimate the decrease caused by all life on the planet. The result is that the entropy increase is enormously larger than is the decrease, i.e., living organisms exist in an environment in which entropy is increasing, thus are consistent with the laws of thermodynamics. There is another clever fine point in Dan’s calculation of the change in entropy of living organisms; he took the change in entropy using Boltzmann’s expression for entropy. Boltzmann’s expression is a logarithm of the number of available energy states. Thus the difference in entropy is equivalent to a ratio of the number of available energy states at the end of the second to the number of available energy states at the beginning of the second. What that calculation does is eliminate any confusion over whether entropy is about spatial order or about the number of energy states. By taking a ratio, it makes no difference how one interprets it. If the number of available energy states is proportional to the order, this proportionality cancels out, and we don’t have to know how spatial order of molecules in an organism is connected to available energy states. What my points are emphasizing is that spatial order/disorder has nothing to do with the concept of entropy. Together, Dan’s calculation and my attempts to clarify the concept of entropy emphasize that the ID/Creationists have absolutely no idea of what they are talking about when they claim that life violates the laws of thermodynamics. When discussing thermodynamics in connection with systems that purportedly decrease entropy, one needs to make clear distinctions between the spatial order of physical objects (which has little to do with entropy and thermodynamics) and the changes in the number of available energy states associated with the changes in the system under study. Calculating the entropy flux (change in entropy per unit of time) and then focusing on an arbitrary single second is simply an efficient way of comparing the changes in entropy of the subsystem with the changes in entropy of its surroundings at the same arbitrary instant. Conclusion 1: Life exists in and is intricately interwoven with an environment in which entropy is increasing; life does not violate the laws of thermodynamics. Life is consistent with those laws (as any system that exchanges matter and energy with its surrounding environment should be). Conclusion 2: The ID/Creationists, from at least the time of Henry Morris, have been systematically misleading their followers and the general public about the very concepts of thermodynamics and entropy and how it is connected with life. And they have done this in spite of repeated corrections by members of the scientific community over the years. Conclusion 3: The study of living systems can benefit from, and requires, a clear understanding of the laws of physics.

David Utidjian · 15 November 2008

Bravo Mike!

I nominate this for post of the week (century? millennium?)

Politely and and thoroughly well said.

-DU-

Michael · 16 November 2008

All life on earth depends on the sun. Without energy of the sun, no evolution. Increasing biological order on earth means increasing disorder of the sun. And finally sun will even collaps some billion years in the future. Its similar to building an automobile: Melting and forming metal and plastic costs a huge amount of energy and pollution. The disorder in all gets bigger than the order the automobile stands for. Entropy stays a one way street.

Dan Styer · 16 November 2008

SB said: An entropic fluctuation posed by the logic stated by the poster’s equation ...
Neither the post nor the paper discussed in the post posits an "entropic fluctuation". I can only surmise that SB hasn't read either the post or the paper, and is simply slinging high-falutin' terms into the air without understanding.

Dan Styer · 16 November 2008

Michael said: All life on earth depends on the sun. Without energy of the sun, no evolution. Increasing biological order on earth means increasing disorder of the sun.
When I started writing the paper, this is what I thought I'd find. However, in fact the entropy of the sun is decreasing. (The sun is heating its environment, and anything that expels heat quasistatically is decreasing in entropy.) It is the entropy of the microwave background that is increasing faster than the entropy of (the sun plus biosphere) is decreasing. I found this result surprising, but there's no escaping it.

DS · 16 November 2008

Dan Wrote:

"I can only surmise that SB hasn’t read either the post or the paper, and is simply slinging high-falutin’ terms into the air without understanding."

There was another guy who used to do stuff like that, but his initials were SFB so this couldn't be the same guy. That would be breaking the rules.

Mike Elzinga · 16 November 2008

I stumbled across this bizarre “rejoinder” on Pravda.ru recently. It’s goofy enough to be a spoof, but probably isn’t. I confess I don't know very much about this site.

Their rather immediate, huffy response to these threads on Evolution and Entropy, a response that more insistently repeats the same crap the ID/Creationists have been spouting all along, is simply more evidence of the conscious political nature of these IDiotic tactics. They use every nasty political trick in the book to keep the culture wars going.

One would hope that the growing awareness of political immaturity in political campaigning will start making these tactics look increasingly childish against the background of really serious issues that require knowledge, intelligence and maturity to grapple with.

Dave Lovell · 16 November 2008

Mike Elzinga said: I stumbled across this bizarre “rejoinder” on Pravda.ru recently. It’s goofy enough to be a spoof, but probably isn’t. I confess I don't know very much about this site.
The referenced post, arguing that entropy prevents evolution, states:
Whatever evolution and natural selection that occurs in nature is limited to within biological kinds..
Has anybody seen an attempt to explain how demonstrated and accepted micro-evolution doesn't violate second law of thermodynamics, whilst macro-evolution does?

phantomreader42 · 17 November 2008

Dave Lovell said:
Mike Elzinga said: I stumbled across this bizarre “rejoinder” on Pravda.ru recently. It’s goofy enough to be a spoof, but probably isn’t. I confess I don't know very much about this site.
The referenced post, arguing that entropy prevents evolution, states:
Whatever evolution and natural selection that occurs in nature is limited to within biological kinds..
Has anybody seen an attempt to explain how demonstrated and accepted micro-evolution doesn't violate second law of thermodynamics, whilst macro-evolution does?
That would require actually defining the imaginary micro/macro boundary, in such a way that would make it harder to move the goalposts later. Such a thing would be a fate worse than death for creationists.

eric · 17 November 2008

Dave Lovell said: Has anybody seen an attempt to explain how demonstrated and accepted micro-evolution doesn't violate second law of thermodynamics, whilst macro-evolution does?
Nothing says creationist arguments have to be consistent. There seems to be room in the big tent for contradictory arguments against evolution. I've heard at least two different arguments on PT (though I'd be hard-pressed to give you specific references): 1. Animals have the information for microevolution built-in/frontloaded into their DNA. No such set of instructions exists for macroevolution, so it can't happen. 2. Microevolution never leads to 'improvement,' its all loss of function, and thus allowed by 2LOT. I'm sure other people have heard other different arguments, too.

SB · 17 November 2008

Mike Elzinga said:

So then, in your expert opinion, how does your definition of entropic flux apply to the statement: “there’s about a trillion times more entropy flux available than is required for evolution.” We can’t have the definition and its context continue to be a moving target The author is using entropic fluctuations as a mathematical variable pertaining cellular chemistry in the context of the reactive potential of cellular subsystems. Is this a point that can be agreed upon?

— SB
Fair questions. There is actually no inconsistency in what Dan Styer was estimating and the concepts I have been explaining. Dan’s calculation is one of those clever back-of-the-envelope calculations that physicists often do to get at the essence of a problem. By using the classical calculations for computing the entropy changes in the Earth and the universe surrounding Earth in a given second, he is taking advantage of the power of classical thermodynamics to calculate this entropy change without having to know all the microscopic details taking place within “system Earth”. The result is that we find an enormous increase in entropy taking place; and that encompasses everything bundled together, including any subsystems that are decreasing in entropy. Then Dan looks specifically at one of those subsystems (living organisms) that are supposedly decreasing in entropy, and he uses Boltzmann’s expression to estimate how much these systems decrease the entropy. In doing this, he makes a very generous estimate that is bound to overestimate the decrease caused by all life on the planet. The result is that the entropy increase is enormously larger than is the decrease, i.e., living organisms exist in an environment in which entropy is increasing, thus are consistent with the laws of thermodynamics. There is another clever fine point in Dan’s calculation of the change in entropy of living organisms; he took the change in entropy using Boltzmann’s expression for entropy. Boltzmann’s expression is a logarithm of the number of available energy states. Thus the difference in entropy is equivalent to a ratio of the number of available energy states at the end of the second to the number of available energy states at the beginning of the second. What that calculation does is eliminate any confusion over whether entropy is about spatial order or about the number of energy states. By taking a ratio, it makes no difference how one interprets it. If the number of available energy states is proportional to the order, this proportionality cancels out, and we don’t have to know how spatial order of molecules in an organism is connected to available energy states. What my points are emphasizing is that spatial order/disorder has nothing to do with the concept of entropy. Together, Dan’s calculation and my attempts to clarify the concept of entropy emphasize that the ID/Creationists have absolutely no idea of what they are talking about when they claim that life violates the laws of thermodynamics. When discussing thermodynamics in connection with systems that purportedly decrease entropy, one needs to make clear distinctions between the spatial order of physical objects (which has little to do with entropy and thermodynamics) and the changes in the number of available energy states associated with the changes in the system under study. Calculating the entropy flux (change in entropy per unit of time) and then focusing on an arbitrary single second is simply an efficient way of comparing the changes in entropy of the subsystem with the changes in entropy of its surroundings at the same arbitrary instant. Conclusion 1: Life exists in and is intricately interwoven with an environment in which entropy is increasing; life does not violate the laws of thermodynamics. Life is consistent with those laws (as any system that exchanges matter and energy with its surrounding environment should be). Conclusion 2: The ID/Creationists, from at least the time of Henry Morris, have been systematically misleading their followers and the general public about the very concepts of thermodynamics and entropy and how it is connected with life. And they have done this in spite of repeated corrections by members of the scientific community over the years. Conclusion 3: The study of living systems can benefit from, and requires, a clear understanding of the laws of physics.
You are absolutely correct on your assessment of cellular chemistry not violating the second law of thermal dynamics. But that's not violation at issue here. It is the ability of life to form from non-life that is in violation. There are three points of topic for cellular chemists that need to be explained without violating the 2nd law of thermal dynamics, also, they need to be solved as a single event: - Cellular Metabolism (multiple simultaneous chemical processes with varying reactive potentials) - Environmental Barrier (selectively permeable) - Self replication (genetic information) If life was created by design this is a non-argument. If life started from non-life, the posted entropic equation needs to satisfy these points within the values of entropic flux. This is the real point of this argument. It is the metabolism of "Life" that overcomes the entropy of cellular chemistry ... so ... (Chicken or the Egg?).

eric · 17 November 2008

SB, I don't believe you when you claim that self-replication violates the second law. I want to see the math, please! I also don't understand what your second point refers to. Environmental barrier to what? Lastly, it is an observable fact that self-replication can occur without cellularity. Witness both viruses and inorganic self-assembling crystals. So your contention that they must arise simultaneously is demonstrably false.
SB said: It is the ability of life to form from non-life that is in violation. There are three points of topic for cellular chemists that need to be explained without violating the 2nd law of thermal dynamics, also, they need to be solved as a single event: - Cellular Metabolism (multiple simultaneous chemical processes with varying reactive potentials) - Environmental Barrier (selectively permeable) - Self replication (genetic information) If life was created by design this is a non-argument. If life started from non-life, the posted entropic equation needs to satisfy these points within the values of entropic flux. This is the real point of this argument. It is the metabolism of "Life" that overcomes the entropy of cellular chemistry ... so ... (Chicken or the Egg?).

SB · 17 November 2008

eric said: SB, I don't believe you when you claim that self-replication violates the second law. I want to see the math, please! I also don't understand what your second point refers to. Environmental barrier to what? Lastly, it is an observable fact that self-replication can occur without cellularity. Witness both viruses and inorganic self-assembling crystals. So your contention that they must arise simultaneously is demonstrably false.
SB said: It is the ability of life to form from non-life that is in violation. There are three points of topic for cellular chemists that need to be explained without violating the 2nd law of thermal dynamics, also, they need to be solved as a single event: - Cellular Metabolism (multiple simultaneous chemical processes with varying reactive potentials) - Environmental Barrier (selectively permeable) - Self replication (genetic information) If life was created by design this is a non-argument. If life started from non-life, the posted entropic equation needs to satisfy these points within the values of entropic flux. This is the real point of this argument. It is the metabolism of "Life" that overcomes the entropy of cellular chemistry ... so ... (Chicken or the Egg?).
I didn't say self-replication violates the 2nd law, it is the starting the complex metabolism of life from non-life that violates the 2nd law. Environmental barrier is the cell wall of all living organisms which actively transports selective materials in and out of the cytoplasm Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together. Now, imagine the same process happening as a random set of events without a lab, or tech, or any plan.

Wheels · 17 November 2008

Chemistry really isn't very random at that level. You can throw all the oxygen you want at gold around 25 degrees C, but you're very unlikely to get the two to combine. Try the same oxygen thing with carbon, nitrogen, and hydrogen, especially all at once. You'll get a lot of very interesting, varied chemicals in very short order. Spread this out over the surface of a planet and you have a staggeringly immense lab full of differential conditions in which countless reactions can take place. Spontaneous reactions with organic chemistry are a fact of life. This happens even in the unoccupied, freezing, near-vacuum of interstellar space.

It's precisely the un-randomness of chemistry that lets us make any predictions about what will happen when substances react. You can't treat all reactions as equally likely, as if it were all random chance. The likelihood of certain reactions taking place is mostly non-random.

Robin · 17 November 2008

SB said: Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together. Now, imagine the same process happening as a random set of events without a lab, or tech, or any plan.
I'm not sure what 'simple life' you are referring to, but the scientists who are working on developing life from inorganic material are not working on a design for that life - they studying and hypothesizing on the processes nature used and trying to recreate those processes. Seems to me you are conflating the design of the lab environment with the design of life itself here. Designing a contamination free lab that can establish an approximate 'early life environment with appropriate conditions' is not the same thing as designing life. Perhaps you are referring to some other 'simple life' creation work.

eric · 17 November 2008

SB said: Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together. Now, imagine the same process happening as a random set of events without a lab, or tech, or any plan.
Done! Now that I've imagined it, your argument loses all value. And you have yet to show any math behind your claim that "starting the complex metabolism of life from non-life" violates 2LOT. Science is not just a conceptual mental exercise. There is math. Styler gave his. Where's yours? eric

eric · 17 November 2008

My apologies to the author; that should be Styer.

SB · 17 November 2008

Wheels said: Chemistry really isn't very random at that level. You can throw all the oxygen you want at gold around 25 degrees C, but you're very unlikely to get the two to combine. Try the same oxygen thing with carbon, nitrogen, and hydrogen, especially all at once. You'll get a lot of very interesting, varied chemicals in very short order. Spread this out over the surface of a planet and you have a staggeringly immense lab full of differential conditions in which countless reactions can take place. Spontaneous reactions with organic chemistry are a fact of life. This happens even in the unoccupied, freezing, near-vacuum of interstellar space. It's precisely the un-randomness of chemistry that lets us make any predictions about what will happen when substances react. You can't treat all reactions as equally likely, as if it were all random chance. The likelihood of certain reactions taking place is mostly non-random.
Try creating an environment where lipids and proteins can be created simultaneously without damaging the products and/or removing the inhibiting waste material. The "Catalystic Clay" theory has been around for decades as a solution to overcome reactive variances , but its proven many different types of catalyst would be needed at the right time and at the right place. Cellular chemistry is far more complex that most people realize.

Science Avenger · 17 November 2008

SB said: Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together.
So you denounce as poor the argument that if evolution was true, then scientists would be able to create life in the lab? In other words, your view is that a creation of life by scientists would validate ID, not evolution, correct?

SB · 17 November 2008

eric said:
SB said: Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together. Now, imagine the same process happening as a random set of events without a lab, or tech, or any plan.
Done! Now that I've imagined it, your argument loses all value. And you have yet to show any math behind your claim that "starting the complex metabolism of life from non-life" violates 2LOT. Science is not just a conceptual mental exercise. There is math. Styler gave his. Where's yours? eric
Sorry you are wrong, what has been done is taking a living cell and replacing all of it genetic information, that doesn't qualify as creating life, they only created the genetic code back in January of 2008. Please don't waste my time on inaccurate information. Thank you.

Mike Elzinga · 17 November 2008

It is the ability of life to form from non-life that is in violation.

— SB
The ID/Creationists have absolutely no evidence for this statement; nor have they even tried to produce any. So, to make such an assertion is simply an argument from incredulity. And to force it onto unsuspecting followers is to close off any further possibilities for deeper investigations and learning.

If life was created by design this is a non-argument.

Translation: “Proceed no farther here; there be demons ahead, and you will loose your sectarian religion and go to hell!” The problem with this argument is connecting any phenomena in the physical world to a supernatural realm and, more particularly, to a sectarian deity within that realm. If you try to dodge this by claiming that the “designer” is natural, all you are effectively doing is telling your followers to shut up, ask no more questions, and believe what you tell them. You still have to explain that natural “designer”; which all ID/Creationists refuse to do. Contrary to the prattling denials of the ID/Creationists, there are thousands of hints in the natural world that life can, and has, emerged from non-life. These are patterns that run throughout Nature, from the formation of protons and neutrons and onward to atoms, molecules, and complex arrangements of these, to the organizations of chemical compounds into more complex patterns and onward to the organizations of classical macroscopic phenomena under the influence of emergent properties that are difficult to foresee from the lower level phenomena. All this is currently under investigation because there are no apparent obstacles in the laws of nature that seem to stand in the way. There are no reasons that we shouldn’t investigate this and continue our quest for understanding. However, the case of the followers of ID/Creationism, the obstacles to learning are those demagogues whose main objective seems to be the keeping of a constant supply of ignorant, worshiping rubes around to bolster their megalomaniac egos and keep the culture wars going forever. Scientific investigation and the quest for deeper understanding is a far more noble cause than sectarian bondage and ignorance.

Wheels · 17 November 2008

SB said: Try creating an environment where lipids and proteins can be created simultaneously without damaging the products and/or removing the inhibiting waste material.
This is a completely different argument from "it won't happen by random chance." Now you're actually naming perceived obstacles and mechanisms, which is a step in the right direction at least.
The "Catalystic Clay" theory has been around for decades as a solution to overcome reactive variances , but ...
But it isn't the only one, it's rather one among a group of competing ideas (which might not even be mutually exclusive to one another) regarding the formation of life abiotically. The fact is that right now we don't have a clear bead on which idea presented (or that has yet to be presented) is the superior explanation. This does not make the origin of life from natural chemical processes impossible, however, and to argue that it does is pretty foolish. Your negative argument, one from the state of ignorance, is not enough. You will have to make a positive argument to support your assertion that abiogenesis violates the laws of thermodynamics. As we've already seen demonstrated (quite handily) over the course of this thread, entropy is a quantifiable value and calculations using it are not extremely difficult to carry out if one knows the subject. So, where are your calculations to falsify abiogenesis?

Henry J · 17 November 2008

Modern cellular chemistry is more complex than some people realize.

The first self replicator wasn't modern, and didn't have other modern life trying to have it for lunch, so it could get by with less.

Henry

SB · 17 November 2008

Science Avenger said:
SB said: Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together.
So you denounce as poor the argument that if evolution was true, then scientists would be able to create life in the lab? In other words, your view is that a creation of life by scientists would validate ID, not evolution, correct?
The point is: there is no empirical data supporting the process of how life stared from non-life as a random event. I would not say creating life from scratch would validate ID, it would only validate that ID is possible. What I'm looking for is the empirical evidence that life could spontaneously start from non-life. Also, let's say everything fell perfectly into place for the first living cell to form. Why would it have a "Will" to actively seek food, or reproduce itself, or flee a threat. For this to happen the cell would need to be aware that "it is" and actively interact with it's environment. Crystals grow and overcome entropy but they are completely passive to their environment very unlike life that reacts actively.

eric · 17 November 2008

SB said:
eric said:
SB said: ...imagine the same process happening as a random set of events without a lab, or tech, or any plan.
Done! Now that I've imagined it, your argument loses all value. [snip]
Sorry you are wrong... [snip] Please don't waste my time on inaccurate information. Thank you.
Tsk tsk, you should read you own post. I'm not wrong - you asked me to imagine it. I did. I can. (...and I'd think very carefully about the implications for ID before you insist my imagining include mechanistic details to be legitimate.) Now for the third time, where's your math supporting your contention that for the development of complex metabolisms from non-life, dS < dQ/T? I am begnning to think you haven't actually done any calculation. But that would mean you don't know what you're talking about, and I don't want to think that of you.

Eric Finn · 17 November 2008

SB said: I didn't say self-replication violates the 2nd law, it is the starting the complex metabolism of life from non-life that violates the 2nd law. Environmental barrier is the cell wall of all living organisms which actively transports selective materials in and out of the cytoplasm
There are several simple examples of systems exchanging molecules. I am not sure, how complex they need to get before we can call the process metabolism. Energy flows are involved in many of these types of exchanging molecules as chemical reactions take place. Wheels pointed out that chemical reactions are not random. Rather, they are selective. Catalysts may provide alternative reaction pathways making things more complex, but no more random. The cell wall is not the only example of selective transport of molecules. For example, consider the simple example of osmotic pressure. You may, and quite rightly so, argue that my simple examples are not sufficient to address the complex problem you presented. Even then, one might ask, what is exactly the level of complexity, at which we are likely to violate the second law of thermodynamics. Styer presented his calculations, which indicate, that even allowing for very generous assumptions, biological evolution does not violate the second law. I understood that you feel that the starting of the complex metabolism (and life) would violate that law, not the subsequent biological evolution. Do you think that it is because the assumptions, which Styer thought were generous, were in error when considering the start of metabolism? Regards Eric

eric · 17 November 2008

SB said: Also, let's say everything fell perfectly into place for the first living cell to form. Why would it have a "Will" to actively seek food, or reproduce itself, or flee a threat. For this to happen the cell would need to be aware that "it is" and actively interact with it's environment.
Are you implying that every living organism has awareness? Because most of them do those three things. That would certainly be an...unusual...idea. If not, why would ancient simple organisms need something modern simple organisms do fine without?

fnxtr · 17 November 2008

Early life would have needed a nutrient-rich environment (whatever that was) to survive in the first place, wouldn't it? So actively seeking food is a non-issue.

What threats would the first life flee from? Hydrogen sulfide?

Will to reproduce? Do salt crystals have a will to reproduce? How about stalactites?

SB you seem to be a little fuzzy here.

Mike Elzinga · 17 November 2008

The point is: there is no empirical data supporting the process of how life stared from non-life as a random event.

— SB
This suggests that you completely misunderstand the issue. The issue is not that “there is no empirical data supporting ‘the’ process”. The issue is that we are hunting for one, or a few, specific needles in a gigantic stack of needles. There are literally thousands of hints in nature that they are there, and there are literally thousands of lines of investigation that probably need to be done unless someone gets very clever or very lucky. Technology has only recently arrived at a place where these lines can be explored more efficiently, and even then it is tedious and time-consuming. If you know of a specific mechanism that prevents life from emerging from non-life, why are you not more curious about what that mechanism is? Why do you not have a drive to learn science well and then go out and seek this mechanism? What evidences do you and the other ID/Creationists have that such a mechanism exists in nature? Why can’t the ID/Creationists ever propose a viable research program that seeks to discover and explain such a fundamental “law of the universe”? Nobel prizes would fall into your laps upon such a discovery. Why are the ID/Creationists wasting their millions on propaganda instead of elucidating that (or those) mechanism(s)? This would be an extremely important line of research. Where is the drive to understand the universe in the ID/Creationists? Why has it been wiped out? What this thread and the many corrections by scientists over the years has shown is that the ID/Creationists spend all of their time misrepresenting scientific theory and evidence while pushing a sectarian agenda. They don’t get their multiple, shallow PhDs for depth and proficiency to be able to dig deeper, but rather to impress rubes in choreographed debates. In other words, the passion to learn, the curiosity about the universe, and the drive to plow into difficult research questions for a lifetime, these are all dead in the ID/Creationists. All that remains is exegesis, hermeneutics, etymology, word games, and the willingness to deceive. Why do you follow them?

DS · 17 November 2008

SB wrote:

"The point is: there is no empirical data supporting the process of how life stared from non-life as a random event."

No. The point is that the second law of thermodynamics does not present a theoretical barrier to the origin of life. The question of evidence for the actual process is another question altogether.

Science Avenger · 17 November 2008

SB said: I would not say creating life from scratch would validate ID, it would only validate that ID is possible. What I'm looking for is the empirical evidence that life could spontaneously start from non-life.
That's fine and good, but what I am looking for with my question is an evolution-denier who is intellectually honest enough to admit that the following two common evolution-denying arguments are contradictory: 1) If evolution were true, then scientists should be able to create life in the lab. 2) If scientists created life in the lab, it would require a lot of design to do so, therefore it would support ID and discredit evolution. It sounds like you fall into camp #2 and therefore would consider #1 a poor argument. Is that a fair representation of your position?

steve · 17 November 2008

1) If evolution were true, then scientists should be able to create life in the lab.

2) If scientists created life in the lab, it would require a lot of design to do so, therefore it would support ID and discredit evolution.

Who said the above statements?

SB · 17 November 2008

Science Avenger said:
SB said: I would not say creating life from scratch would validate ID, it would only validate that ID is possible. What I'm looking for is the empirical evidence that life could spontaneously start from non-life.
That's fine and good, but what I am looking for with my question is an evolution-denier who is intellectually honest enough to admit that the following two common evolution-denying arguments are contradictory: 1) If evolution were true, then scientists should be able to create life in the lab. 2) If scientists created life in the lab, it would require a lot of design to do so, therefore it would support ID and discredit evolution. It sounds like you fall into camp #2 and therefore would consider #1 a poor argument. Is that a fair representation of your position?
I would agree to statement 1 Statement 2 is not an all or none answer. The plausible of life to starting from ID or evolution equally rely on a premise that cannot be proved scientifically. Pick your faith. One of the logic flaws in the science published relating to evolution is passing it off as empirical proof when the extrapolation of data is actually being made from a non-empirical limit to an empirical limit which will always resolve non-empirically, but, one can extrapolation between empirical limits and will resolve empirically. To render life from non-life as an empirical set will require not only HOW life started from non-life, but that the event ACTUALLY happened. (could have is not empirical science, it is faith) My main concern is to stop the propagation of bad science (and non-science) also, to show that the spontaneous evolution of life from non-live theory is NOT built on empirical data. It is another form of a non-empirical faith with its harden followers. Starting with the entropic fluctuations of a living cell, it IS NOT EQUAL to the the fluctuations needed for the start of life. Metabolic energies can be measured, they can be observed, remeasured and extrapolated predictions made. The entropic fluctuations needed for non-life to life cannot be empirically resolved because the process isn't known so there is NO equation for its proof, if you have one proving one way or the other, it is wrong.

Mike Elzinga · 17 November 2008

Crystals grow and overcome entropy but they are completely passive to their environment very unlike life that reacts actively.

— SB
Emphasis added. This is another common tactic of the ID/Creationists; namely, keep repeating the misconceptions as though that will somehow make the misconceptions true. This in spite of repeated explanations about what entropy really is. We gave a specific example of crystal formation that shows that order and entropy are not the same. Crystal growth occurs and entropy increases because energy has to be released in order for crystal growth to occur. What in those explanations did you not understand? Explain to the scientific community how crystal growth “overcomes entropy”. Just what do you think entropy is? What do you think the second law of thermodynamics is all about? Have you read any of the posts here? Please be advised that stubborn argumentation with misconceptions about science is not a refutation of science. It simply engraves the awareness of your ignorance deeper in the minds of observers.

Mike Elzinga · 17 November 2008

My main concern is to stop the propagation of bad science (and non-science) also, to show that the spontaneous evolution of life from non-live theory is NOT built on empirical data. It is another form of a non-empirical faith with its harden followers.

— SB
So ID/Creationism has established a better track record than science has? Is that what you are implying? Why is following thousands of hints and clues in the formation of complexity in this universe “bad science”? How is asserting the existence of a “designer” on the basis of sectarian dogma better science? How is connecting physical data to a supernatural designer more scientific? If you want to follow the standard shtick of denying that the designer is supernatural, what is the science behind that? Perhaps you should stop bluffing and produce some evidence and a research program that will elucidate your “barrier(s)” to evolution of life from non-life or from “micro-evolution” to “macro-evolution”. Can you explain any of these concepts?

Stanton · 17 November 2008

SB said: To render life from non-life as an empirical set will require not only HOW life started from non-life, but that the event ACTUALLY happened. (could have is not empirical science, it is faith)
So please explain why trying to experimentally examine, determine and replicate the scenarios that lead to the formation of self-replicating organic molecules, as well as examining paleontological evidence of organic traces to be "faith" and not "empirical science."
My main concern is to stop the propagation of bad science (and non-science) also, to show that the spontaneous evolution of life from non-live theory is NOT built on empirical data. It is another form of a non-empirical faith with its harden followers.
Again, please explain why trying to experimentally determine, examine and replicate the scenarios that lead to the formation of self-replicating molecules "bad science (and non-science" and or "non-empirical faith."
The entropic fluctuations needed for non-life to life cannot be empirically resolved because the process isn't known so there is NO equation for its proof, if you have one proving one way or the other, it is wrong.
So, why are you saying that scientists are forbidden from trying to experimentally discover the circumstance and or scenario that lead to the first "life"?

Mike Elzinga · 17 November 2008

The entropic fluctuations needed for non-life to life cannot be empirically resolved because the process isn’t known so there is NO equation for its proof,…

— SB
What equation is required to “prove” the existence of the Hawaiian Islands? If there isn’t such an equation, does that mean we can’t “prove” it one way or the other? What is the equation that “proves” the existence of this exchange of posts on this website? Does your computer exist? What is this business about an equation all about? Do you understand why we skeptical about your ID/Creationist arguments?

Richard Simons · 17 November 2008

SB wrote I would not say creating life from scratch would validate ID, it would only validate that ID is possible.
Can you point to anyone who has said that ID is not possible? The objection to ID is that there is no possible result that could demonstrate that it is wrong because there is no testable prediction that can be made from it. Besides, so far everything seems to work as though there is no background intelligence manipulating things. If we saw completely novel species randomly popping into existence with no relation to any other species then ID might be worthy of consideration, but it would still not be science as it would remain untestable.

Dan Styer · 17 November 2008

SB said: Crystals grow and overcome entropy but they are completely passive to their environment
Right on one count, wrong on two. (1) "Crystals grow." That's correct. (2) "Crystals overcome entropy." No. Crystals grow in accord with the law of increasing entropy of the universe. The crystal decreases in entropy, the environment increases in entropy even more. The same thing happens every time a cup of hot coffee cools. Nothing special is involved. (3) "Crystals are completely passive to their environment." Crystals can grow if they are in a concentrated environment, they can dissolve if they are in a dilute environment. This is not complete passivity.

Mike Elzinga · 17 November 2008

Crystals grow and overcome entropy but they are completely passive to their environment very unlike life that reacts actively.

— SB
Let me take advantage of an opportunity to try again to clarify by using two different perspectives. Dan just replied that the entropy of the crystal decreased while the entropy of the rest of the environment increased even more. That is exactly right. The heat of fusion (energy that needs to be released in order for the atoms of the crystal to condense into a regular array) is released from the crystal at the temperature of the crystal (roughly), and is received at a lower temperature by the surrounding environment. dS = dQ/Tcrystal leaves the crystal, so the crystal entropy decreases. However dQ/Tenvironment is received by the environment and this is larger because Tenvironment is smaller (dQ is the same). Thus the entropy of the environment increases more than the entropy of the crystal decreases, and overall entropy increases. From another perspective, the atoms that would condense into a crystal cannot do this unless energy can be released from the system of atoms. The moment that energy can be released is the moment that energy paths from the atoms of the crystal outward the surround environment open up; the system is no longer isolated (i.e., is no longer adiabatically enclosed). Depending on the specific system, these paths can be photons, phonons, or other atoms onto which momentum and energy can be transferred and carried away (somebody is blowing on the crystal atoms to “cool” them). These paths are additional energy states, and many calculations can associate these with the surrounding environment and not with the crystal. Confining attention to the just the atoms that make up the crystal reveals that these fall into fewer energy states (entropy decreases) but the energy states that are carrying away the energy are additional states over and above what were originally there (total entropy has increased). If those additional states carry energy off to infinity where it is scattered and absorbed so that it cannot return to the system to melt the crystal again, this energy is irretrievable. Thus crystal growth does not “overcome” entropy. The overall entropy increases, and just confining our attention to the atoms of the crystal suggests that entropy has only decreased when, in fact, there is, and must be, an exchange with the environment in order for the crystal to form. That exchange involves an increase in the total number of available energy states (an overall increase of entropy). The crystalline pattern is determined by the rules of quantum mechanics, but the nature of the energy exchanges show why the second law holds. This remains true whether or not the system is alive and is “active” or is non-living. Nothing “violates the laws of thermodynamics”. When scientists use that particular expression, it means that a phenomenon is not consistent with the physical universe. If anyone wants to make a claim that such a phenomenon is not consistent with the physical universe, the immediate implication is that there is something supernatural going on. Then it is no longer science.

Wheels · 17 November 2008

SB said:
Science Avenger said:
SB said: I would not say creating life from scratch would validate ID, it would only validate that ID is possible. What I'm looking for is the empirical evidence that life could spontaneously start from non-life.
That's fine and good, but what I am looking for with my question is an evolution-denier who is intellectually honest enough to admit that the following two common evolution-denying arguments are contradictory: 1) If evolution were true, then scientists should be able to create life in the lab. 2) If scientists created life in the lab, it would require a lot of design to do so, therefore it would support ID and discredit evolution. It sounds like you fall into camp #2 and therefore would consider #1 a poor argument. Is that a fair representation of your position?
I would agree to statement 1
Why? Evolution doesn't have much, if anything, to do with the origin of life. That's abiogenesis, a separate field of study. Evolution would be demonstrably true even if life was originally Created in a special supernatural even 6-10K years ago. Or 350 mya by spacemen with silver coveralls and funny doodads sticking out of their hats, for that matter. As to the origin of life from non-life, this is pretty much the required conclusion just by applying some thought to the matter. If life on Earth was designed by other life, that other life had to come from somewhere. Where did the other life originate? Was it designed? If so, who designed those designers? And so on and so forth. Eventually you get to a point where your options are severely limited, where you have essentially: 1) An uncaused origin of life, or 2) A naturally caused origin of life. We don't have any evidence for the first option, and in fact it would be enormously difficult to even tell if such a thing could or couldn't happen. Perhaps impossible! We are left with the second option as the most likely course that could bear fruit and illuminate the origin of Earth life. Work on such abiogenesis is actually already yielding results that promise to shed light on the issue, if not how things happen, then at least how they didn't.

Science Avenger · 17 November 2008

SB said:
Science Avenger said: That's fine and good, but what I am looking for with my question is an evolution-denier who is intellectually honest enough to admit that the following two common evolution-denying arguments are contradictory: 1) If evolution were true, then scientists should be able to create life in the lab. 2) If scientists created life in the lab, it would require a lot of design to do so, therefore it would support ID and discredit evolution. It sounds like you fall into camp #2 and therefore would consider #1 a poor argument. Is that a fair representation of your position?
I would agree to statement 1
But then what was the relevance of your comment that: "Humans are on the verge of creating simple life from scratch, but for this to happen they need one heck of a design to put it together." If you don't think that need for a heck of a design supports ID, then the only response necessary is "so what?" I say if scientists can create an environment in a lab that is consistent with what we know about earth circa 2-3 bya, and have a replicator that could arguably be called "life" result, I'd say that supports the more materialist theories of life's origins, and would deal a heavy blow to ID. That it required an intelligence to design the artificial environment is beside the point, every bit as much as the intelligent design of the Tower of Pisa is irrelevant to what experimental results from dropping stones from it tell us about gravity.

Henry J · 17 November 2008

My main concern is to stop the propagation of bad science (and non-science) also, to show that the spontaneous evolution of life from non-live theory is NOT built on empirical data. It is another form of a non-empirical faith with its harden followers.

Seems like stopping oneself shouldn't all that difficult. Henry

Stanton · 17 November 2008

Henry J said:

My main concern is to stop the propagation of bad science (and non-science) also, to show that the spontaneous evolution of life from non-live theory is NOT built on empirical data. It is another form of a non-empirical faith with its harden followers.

Seems like stopping oneself shouldn't all that difficult. Henry
Technically speaking, Intelligent Design Theory doesn't count as "propagation of bad science (and non-science)," or "non-empirical faith" because its supporters say so.

Wheels · 18 November 2008

The argument that human experiments to reproduce abiogenesis in the lab necessarily support the need for an Intelligent Designer to start life in the past have aptly been compared to the argument that experiments which simulate lightning in the lab require there to be lightning gods to produce the bolts we seen in nature.

SB · 18 November 2008

Wheels said: The argument that human experiments to reproduce abiogenesis in the lab necessarily support the need for an Intelligent Designer to start life in the past have aptly been compared to the argument that experiments which simulate lightning in the lab require there to be lightning gods to produce the bolts we seen in nature.
The event of creating life in a lab will supply empirical data for references, that's all. Who knows, maybe all that will be produced is a replicated dead cell.

SWT · 18 November 2008

SB said: I didn't say self-replication violates the 2nd law, it is the starting the complex metabolism of life from non-life that violates the 2nd law.
Once again, if you're going to make a second law argument about which chemcial processes are possible and which are not possible, this requires mathematical development and calculation. Now, living organisms function via autocatalytic reaction sets, where the products from some reactions are catalysts for other reactions. Stuart Kauffman has proposed a mechanism by which autocatalytic reaction sets can arise naturally. I suggest you hunt down some of his work and do the math ... if you can prove that the formation of autocatalytic reaction networks violates the second law, you could probably get a peer-reviewed publication out of it. You would certainly gain a lot of traction in discussions like this if you demonstrated that you knew how to apply the second law rigorously. However, before you spend a lot of time on this project, though, there's another question you might want to consider. At some point, it's quite likely that some intrepid investigator will in fact synthesize, from relatively simple chemicals, a living system -- "starting the complex metabolism of life from non-life." Will that investigator have violated the second law?

eric · 18 November 2008

SB said: To render life from non-life as an empirical set will require not only HOW life started from non-life, but that the event ACTUALLY happened. (could have is not empirical science, it is faith)
Does this also mean that science will never know how black holes form until we can cause a star to explode and watch what happens? No. Theories are used to make predictions. When those predictions turn out to be true, we gain confidence that the underlying theory is correct - even the parts that aren't directly demonstrable. If theory A leads to predictions B, C, and D, and you figure out that C and D are true, you are more confident in A than you were before, even if B remains unknown. ID theory has made no testable predictions. No B. No C. No D. So even while B remains unknown, our confidence in evolution is justifiably higher than our confidence in ID. Because evolution has led to accurate predictions of how the world works, while ID has not.
the spontaneous evolution of life from non-live theory is NOT built on empirical data.
But it is. It is an empirical fact that inorganic carbon interacts with H, O, N, P using the same laws of chemistry as organic carbon - inorganic carbon can form organic molecules. It is an empiricial fact that inorganic carbon does form simple organic molecules under fairly easy to achieve conditions. It is an empirical fact that these simple organic molecules can and do spontaneously polymerize. It is an empirical fact that polymerization or crystal growth in a "seed" can serve as a catalyst for further growth. i.e. reproduce. Thus we have an enormous amount of observed, empirical facts demonstrating that abiotic chemical mixtures can react to form reproducing organic polymers. All the needed steps have been observed. We don't exactly how life started or how DNA or simpler reproducing strings were formed, but to compare this real science to ID's claim that something unknown happened at sometime somewhere using some unknown process is just ludicrous. You might say that abiogenesis is supported by everything we know about carbon chemistry, while ID is supported by nothing whatsoever being known about any designer.
Starting with the entropic fluctuations of a living cell, it IS NOT EQUAL to the the fluctuations needed for the start of life.
It is not the processes within the cell that put a thermodynamic limit on what can happen, it is the processes of the entire system in which the cell is embedded. "Starting with the entropic fluctuations of a living cell" is to assume your system is closed. This is a demonstrably wrong assumption.

DS · 18 November 2008

Sorry guys, but this SB character is starting to sound more and more like SFB. Grammatical errors are starting to creep in and he is starting to claim that scientists take everything on faith without evidence. If it isn't the same guy he sure did at least take a page from the same playbook. Why don't we see if it can read and understand a reference before it moves the goal posts again? If it starts claiming that it didn't write things that are still there for all to see then we'll have to initiate another flush cycle.

If the administration refuses to automatically block the address, then the troll will simply change names hundreds of times in an attempt to ruin this site. I see no reason why this should be allowed. The troll has proven that it is incapable of learning and PvM has already declared it banned. Please, don't let this nonsense ruin the site for everyone.

If by any chance SB is not really SFB, you have my sincere apology. Don't be seduced by the dark side, that way lies only pain and sorrow.

Henry J · 18 November 2008

DS,

The accusation that scientists take things on faith isn't a particularly rare tactic among anti-evolutionists; I wouldn't base anything on that. Besides, SB is way more coherent than the nameful one was, and is more definite in what he's claiming.

Not that the "faith" claim has any validity of course; that's basically asserting that scientists would cling to the theory even if contrary evidence started pouring in. But how they'd react to that can't be reliably judged unless it were to actually happen, and there's no sign that it will. (And even if it did, new theories often absorb the old theory as special or limiting cases when the old theory has stood up to continuous research for decades by many thousands of researchers.)

Henry

Mike Elzinga · 18 November 2008

At some point, it’s quite likely that some intrepid investigator will in fact synthesize, from relatively simple chemicals, a living system – “starting the complex metabolism of life from non-life.” Will that investigator have violated the second law?

— SWT
:-) Let me stick my neck out and make a prediction. The response will go something like the standard shtick from the ID/Creationists; namely, “It just proves that intelligence is required to ‘overcome entropy’.”

Wheels · 18 November 2008

Except for crystals.

Mike Elzinga · 18 November 2008

The event of creating life in a lab will supply empirical data for references, that’s all.

— SB
What does “supply empirical data for references” mean? Most of us here believe this is more fuzzy thinking that is evidence of your unwillingness to correct your ID/Creationist egregious misconceptions about science and evolution. Explain to us why the evolution of life from non-life so painful for ID/Creationists to face up to? Why is it not a fascinating process that stimulates a desire to know how it works?

SB · 18 November 2008

Mike Elzinga said:

The event of creating life in a lab will supply empirical data for references, that’s all.

— SB
What does “supply empirical data for references” mean? Most of us here believe this is more fuzzy thinking that is evidence of your unwillingness to correct your ID/Creationist egregious misconceptions about science and evolution. Explain to us why the evolution of life from non-life so painful for ID/Creationists to face up to? Why is it not a fascinating process that stimulates a desire to know how it works?
It means: If creating life from scratch is possible, all the processes, energy and so on will be assigned empirical values allowing the process to be measurable and repeatable (that is what science is). Empirical values cannot be assigned without knowing the process. Life from non-life is not painful concept to me, the bad (non)science I see posted here is painful though, I have an open mind, I know I don't have the answer, I also know you do not have the answer either. Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof? Oh, because of blind faith, never mind.

eric · 18 November 2008

Mike Elzinga said: Explain to us why the evolution of life from non-life so painful for ID/Creationists to face up to?
Going out on a limb? I think they think abiogenesis makes our place in the universe less special, less unique. Just as heliocentrism and evolution did. Personally I find that comforting; the less special we are, the more likely we are to have interesting neighbors. :)

Mike Elzinga · 18 November 2008

Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof? Oh, because of blind faith, never mind.

— SB
This is projection, pure and simple. Those in the science community who have paid any attention to the claims of the ID/Creationists have dug into them extensively over the years and deeply understood their roots, the misconceptions, and the sectarian political tactics used to propagate these claims and misconceptions. It is that understanding that convinces us in the scientific community that ID/Creationism is a sham. On the other hand, as your posts continually remind us, ID/Creationists never ever make the effort to dig into the science and correct their misconceptions about it. The only evidences we ever see of ID/Creationists pouring over scientific literature are examples like those 130 or more documented cases on TalkOrigins.org of quote-mining and spinning of scientific concepts into a mish-mash of confusion and political talking points to inflame the culture wars. Can you explain to us why this difference exists between scientists who understand ID/Creationism and the ID/Creationists who don’t understand science yet are willing to propagandize and spread misinformation and misconceptions? Why are you yourself unwilling to correct your misconceptions about science even as you are pompously pretending to lecture us about open mindedness?

SWT · 18 November 2008

Whoa there, back up the bus!
SB said: It means: If creating life from scratch is possible, all the processes, energy and so on will be assigned empirical values allowing the process to be measurable and repeatable (that is what science is). Empirical values cannot be assigned without knowing the process. Life from non-life is not painful concept to me, the bad (non)science I see posted here is painful though, I have an open mind, I know I don't have the answer, I also know you do not have the answer either. Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof? Oh, because of blind faith, never mind.
I don't think anybody in this thread has said they know for sure how abiogenesis occurred, or that the evidence regarding any particular abiogenesis hypothesis has the same weight as the evidence for modern evolutionary theory. Those doing research in the field are asking the question, "How could this have happened?" Even though they don't have a firm answer, they've learned a lot of interesting things along the way about what might have happened, what probably didn't happen, and about how the world actually works. On the other hand, one person in this thread (that would be you, SB) has claimed not only that abiogenesis did not occur, but that it could not possibly have occurred. I've challenged you to prove this -- time for you to put up something rigorous to back up this exceptionally strong statement. By the way, what testable predictions does ID make about abiogenesis or self-organizing systems? Or biological evolution? Or anything?

eric · 18 November 2008

SB said: Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof?
Because some of the processes hypothesized in abiogenesis are, as you demand, measurable and repeatable. Whereas with ID, none of them are. Don't you grasp the idea of intercomparing theories to determine which is best? Anyway you don't apply your "all processes must be understood" standard to the theory of gravity. Or germ theory. Or QM. In fact you only seem to apply it to abiogenesis and evolution. Why is that?

Henry J · 18 November 2008

Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof?

ID doesn't explain anything; it's merely an assertion that some agency or other was responsible. By itself that doesn't even contradict the notion that abiogenesis could have happened in a way consistent with known (or knowable) processes. Even if we assume for sake of argument that some agency directly engineered first life, if we don't know any details about the presumed agency, we can't assume that it didn't use those processes to get what it wanted. But that aside, I've yet to hear of any evidence that abiogenesis required something outside of known physics and chemistry. Henry (Btw, why isn't "abiogenesis" in the spell checker, or am I misspelling it?)

Mike Elzinga · 18 November 2008

Personally I find that comforting; the less special we are, the more likely we are to have interesting neighbors. :)

— eric
Cool! I like that. I’m going to steal it. :-)

Eric Finn · 18 November 2008

SWT said: I don't think anybody in this thread has said they know for sure how abiogenesis occurred, or that the evidence regarding any particular abiogenesis hypothesis has the same weight as the evidence for modern evolutionary theory. Those doing research in the field are asking the question, "How could this have happened?" Even though they don't have a firm answer, they've learned a lot of interesting things along the way about what might have happened, what probably didn't happen, and about how the world actually works.
It is also my understanding that nobody has made strong claims about abiogenesis. Much stronger claims have been made about the theory of evolution - with a little bit of back-up from actual observations. We have only somewhat scattered hypotheses regarding the mechanisms by which abiogenesis might have taken place. Hypotheses that are still to be confirmed, or more likely falsified. From this we can conclude that the theory of biological evolution is on shaky grounds and is based on faith only. Or, did I miss something? Evolution does not seem to contradict the second law of thermodynamics. No proposed mechanism that might have a role in abiogenesis seems to violate the second law of thermodynamics (as far as I know, which is not very far). So, it must be the start of life and the complex metabolism in itself that violates the second law of thermodynamics. Even if there were plausible mechanisms for the start of complex metabolism, they must be wrong, for the very reason that they do not violate the second law of thermodynamics. Regards Eric

DS · 18 November 2008

Come on you guys. It's making the same stupid grammatical errors, claiming people said things they didn't, denying it said things it strongly implied, demanding equations and changing the topic when it's shown to be completely ignorant. If it isn't the same troll it's just as worthless. Whatever you do don't use foul language, it gets really mad but it still won't go away. I know, how about fowl language instead, you know like:

Cockatoo
Great blue tit
Blue footed boobie

If you want to respond to this troll go right ahead, just remember I told you so. I'm sure PZ will be along in about 5000 posts to clean things up. Of course by then it will have reported all of you to your bosses for something or other and posted all of your phone numbers. That's what it does when it loses an argument.

Science Avenger · 18 November 2008

SB said: [supply empirical data for references] means: If creating life from scratch is possible, all the processes, energy and so on will be assigned empirical values allowing the process to be measurable and repeatable (that is what science is). Empirical values cannot be assigned without knowing the process. Life from non-life is not painful concept to me, the bad (non)science I see posted here is painful though, I have an open mind, I know I don't have the answer, I also know you do not have the answer either. Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof? Oh, because of blind faith, never mind.
Yeah, DS beat me to it again, but his true colors are showing through. It wasn't so bad up to this point because he managed to ask some substantive questions. I learned a few things reading the answers. But now he's begun the same path of not owning up to what he says, making up self-serving definitions, and projecting his faith onto us. Frankly, I don't care if it's THE ONE or not, anyone pulling all that shit should be banned. Oh, BTW troll: 1) one does not assign empirical values, one measures them. One assigns arbitrary values. 2) Science is far more than repeatability. It's also very much about falsifiable testing and a posteriori revisions. 3) Spontaneous generation of life from non-life is a better alternative to ID because it does have some evidence to back it, however paltry it might be compared to what evolution has going for it. ID has no evidence at all, especially for the most important component: the designer. And yet IDers insist ID isn't about this most crucial information. ID is a politically motivated scam to get creationism around the courts and into classrooms. Let us not get so involved with the scientific refutations of their nonsense that we miss the essentials here. ID is creationism dressed up in scientific appearance but without any of its substance. They have scientists that do no science, a theory with no theory, and peer review that only uses one of those words. Their entire approach is perfectly illustrated by this Ann Coulter footnote that wasn't a footnote, and they deserve about the same level of respect.

Mike Elzinga · 18 November 2008

Yeah, DS beat me to it again, but his true colors are showing through. It wasn’t so bad up to this point because he managed to ask some substantive questions. I learned a few things reading the answers. But now he’s begun the same path of not owning up to what he says, making up self-serving definitions, and projecting his faith onto us.

— Science Avenger
I agree; DS appears to be right. And we are finally starting to see the beginnings of that inevitable endlessly repeating cycle again. The only thing that that kind of behavior illustrates is, “This is your brain on ID/Creationism; any questions?”

SB · 18 November 2008

Science Avenger said:
SB said: [supply empirical data for references] means: If creating life from scratch is possible, all the processes, energy and so on will be assigned empirical values allowing the process to be measurable and repeatable (that is what science is). Empirical values cannot be assigned without knowing the process. Life from non-life is not painful concept to me, the bad (non)science I see posted here is painful though, I have an open mind, I know I don't have the answer, I also know you do not have the answer either. Why do evolutionist persist that life spontaneously came from non-life and is a better alternative to ID without having empirical proof? Oh, because of blind faith, never mind.
Yeah, DS beat me to it again, but his true colors are showing through. It wasn't so bad up to this point because he managed to ask some substantive questions. I learned a few things reading the answers. But now he's begun the same path of not owning up to what he says, making up self-serving definitions, and projecting his faith onto us. Frankly, I don't care if it's THE ONE or not, anyone pulling all that shit should be banned. Oh, BTW troll: 1) one does not assign empirical values, one measures them. One assigns arbitrary values. 2) Science is far more than repeatability. It's also very much about falsifiable testing and a posteriori revisions. 3) Spontaneous generation of life from non-life is a better alternative to ID because it does have some evidence to back it, however paltry it might be compared to what evolution has going for it. ID has no evidence at all, especially for the most important component: the designer. And yet IDers insist ID isn't about this most crucial information. ID is a politically motivated scam to get creationism around the courts and into classrooms. Let us not get so involved with the scientific refutations of their nonsense that we miss the essentials here. ID is creationism dressed up in scientific appearance but without any of its substance. They have scientists that do no science, a theory with no theory, and peer review that only uses one of those words. Their entire approach is perfectly illustrated by this Ann Coulter footnote that wasn't a footnote, and they deserve about the same level of respect.
1. An empirical or non-empirical value can be assigned to and define a variable 2. Your rebuttals are only stating subcategories of what I posted. 3. I have no problem with someone stating an "opinion" that they prefer one theory over another, but I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad. 4. By using the term creationism in that context, I assume you have a pregidous towards Christians? Buddhist don't have lobbyists, are they exceptable? Why assume ID has an affiliation? There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?

David Utidjian · 18 November 2008

SB said: 3. I have no problem with someone stating an "opinion" that they prefer one theory over another, but I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad.
What valid empirical science is suppressed or ignored? What evidence is there to support this assertion? Does this science have valid empirical data supporting the theory? Where is this empirical data? Does it have a theory that is supported by the data? Where/what is this theory?
There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?
String theory... I speak it like a native. What is this "theoretical evidence" that you speak of? -DU-

Mike Elzinga · 18 November 2008

…but I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad.

— SB
Ironic to say the least.

There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?

Right on schedule; as DS suspected. After your display of thermodynamic expertise, are we now to believe you have some deep insights into string theory? I believe this is called baiting as well as changing the subject. It is part of the standard ID/Creationist shtick. You will, of course, pardon the skepticism and understand if no one takes the bait.

eric · 18 November 2008

SB said: I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad. There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?
I'm with David - please, enlighten us. We are waiting with bated breath for your exposition of what science is being suppressed, and how string theory supports design. I assume the latter with be math-lite, as you have so far been unable even to solve for dS to support your contentions, so string theory is a foregone conclusion.

SWT · 18 November 2008

Hey SB,

Before we move on to the connection between string theory and ID, would you please do us the favor of telling us what testable predictions ID makes about abiogenesis, self-organizing systems, or biological evolution?

And how are you coming along on a rigorous proof that abiogenesis violates the second law?

DS · 18 November 2008

Wait, I know this one. String theory obvioulsy predicts a magic invisible hologram that doesn't work in the dark!

Look, if anyone really wants to induldge this troll, give it a scientific reference to read and let it try to explain it in it's own words. That should prove very quickly that it doesn't have the faintest clue what it is talking about. Just choose one paper and stick to it, something on basic string theory should do. Don't let it change the subject or claim that it doean't have time to read the paper. Force it to explain something concrete, preferably mathematical.

Again, don't say I didn't warn you.

PZ, how long will you let this go on now that it has gotten completely off toipic?

SWT · 18 November 2008

DS said: Look, if anyone really wants to induldge this troll, give it a scientific reference to read and let it try to explain it in it's own words.
How about this one? Styer DF (2008) Entropy and evolution. Am J Phys 76(11):1031-1033.

DS · 18 November 2008

Somewhat on-topic, but not a bad idea. Nick has already posted the link. You better post a free link though. The troll has shown a definate aversion to paying for any reference, even though it posts from a library and the charge is only $19 dollars if you don't have a subscription. The abstract describes the math as elementary, so the troll should have no trouble at all explaining it to everyone. Now what are the odds that SFB has a subscription to AJP?

Maybe we will be treated to another "walk thru" like the one it gave for the magic invisible hologram hypothesis in which it blithered about the definition of a hologram for days, never presented any evidence of any kind and then claimed that the whole thing was merely an "analogy" anyway. Oh well, what can you expect from someone who describes proteins as "bricks"?

Science Avenger · 18 November 2008

SB said: [a bunch if intellectually dishonest nonsense]
Yep, that's him. Boot him.

fnxtr · 18 November 2008

"pregidous"????!??!?!

HA HA HA HA HA HA HA HA HA!!!! etc....

SWT · 18 November 2008

DS said: Somewhat on-topic, but not a bad idea. Nick has already posted the link. You better post a free link though. The troll has shown a definate aversion to paying for any reference, even though it posts from a library and the charge is only $19 dollars if you don't have a subscription. The abstract describes the math as elementary, so the troll should have no trouble at all explaining it to everyone. Now what are the odds that SFB has a subscription to AJP?
SB is always free to look up Dr. Styer's email address and request a reprint or preprint of the article. (I don't know how AJP handles copyright issues for reprints and preprints.) And indeed, the math in the article is no trickier than the math you might find in, say, a main post on this blog. I promise!

David Utidjian · 19 November 2008

fnxtr said: "pregidous"????!??!?! HA HA HA HA HA HA HA HA HA!!!! etc....
When I first saw that I was thinking "prediginous" (from October Sky), or perhaps it was some kinda language that is indigenous to creationists. "Creotonics"?, "Godonics"? The main reason the language (or lack thereof) of SBs last post seems so humorous is that it is really trying to sound sophisticated and erudite but it just really fails so miserably when the words are misspelled so often. Then there was "exceptable." I a awaiting the appearance of "an emphatic non-buttressation" (or something). Ah the cromulence :) -DU-

Dave Lovell · 19 November 2008

SB said: The event of creating life in a lab will supply empirical data for references, that's all.
SB, it would do much, much, more than this for someone postulating that 2LOT is a barrier to abiogenesis. It would mean that the "intelligence" of a research scientist was every bit as capable of violating 2LOT as the "intelligence" of the Original Intelligent Designer, and the challenge then would be to establish exactly how much "intelligence" is required to violate 2LOT. Would that of a non-scientist be sufficient? or a Chimpanzee? or a dolphin? or a Fundie? or a dam designing beaver, or a mound designing termite, or a reef designing coral, or a stromolite designing bacterium etc,etc.

Dan Styer · 19 November 2008

SWT said: SB is always free to look up Dr. Styer's email address and request a reprint or preprint of the article. (I don't know how AJP handles copyright issues for reprints and preprints.) And indeed, the math in the article is no trickier than the math you might find in, say, a main post on this blog. I promise!
In fact, SB doesn't need to look up my computer mail address ... I'll tell him/her! It's what anyone would have guessed: Dan.Styer at oberlin.edu. I know that AJP won't go ballistic if I send off a few copies without charging ... I've already sent them to a few scientists in third-world and Eastern European countries. I would be most happy to send him/her a copy as well, as it's clear from his/her comments that he/she hasn't read it: Several of the questions he/she raises as deep issues are dealt with in the paper by a few lines of arithmetic.

SB · 19 November 2008

eric said:
SB said: I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad. There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?
I'm with David - please, enlighten us. We are waiting with bated breath for your exposition of what science is being suppressed, and how string theory supports design. I assume the latter with be math-lite, as you have so far been unable even to solve for dS to support your contentions, so string theory is a foregone conclusion.
By suppressed I'm referring to data bias in publish papers omitting contradicting data (bad science)in order to get publish by politically motivated money. Anyone who says it is not happening is naive or untruthful. One example, survivle of the fittest is a foundation stone in evolution. The better the organism is at surviving the better the chances of survivel. Longevity fits into that equation, the longer the organism survives the more chances it has to procreate. So by pure logic life expectancies should show a trend of increasing over time. That evidence is not there, along with a multitude of other evolutionary anomalies (The Hobbit?)Denying or omitting these anomalies in a published paper is data bias and suppression. Who want to explain to me what "Entanglement" is?

eric · 19 November 2008

SB said: By suppressed I'm referring to data bias in publish papers omitting contradicting data (bad science)in order to get publish by politically motivated money.
Ah. Here I thought you were saying IDers have done research. But I take it from your answer that we're in agreement that they haven't.
the longer the organism survives the more chances it has to procreate. So by pure logic life expectancies should show a trend of increasing over time. That evidence is not there
Increasing lifespan is one possible strategy among many. We'd no more expect every species to develop the same offspring-increasing adaptation than we would expect every species to develop feathers for heat retention. Species use multiple, different adaptations to solve the same problem. This is elementary stuff - how did you miss it? You still have yet to show any math supporting your claim that abiogenesis violates the 2LOT. And you have yet to explain how you think string theory supports intelligent design. Pulling physics terms from a dictionary and asking us to explain them to you is neither 'argument' nor 'explanation'.

Dave Luckett · 19 November 2008

"By suppressed I’m referring to data bias in publish papers omitting contradicting data (bad science)in order to get publish by politically motivated money."

Insofar as I am able to decipher this editor's nightmare, you are telling us that scientists deliberately omit data, because they and scientific publications are engaged in a conspiracy deliberately to deceive the trusting public, because someone is making money out of this. That is, corporations and governments are investing in research that they know is going to produce misinformation. They do not want real information about the real world because as everyone knows, corporations and governments do not ever concern themselves with results, especially those that involve money. Indeed, all they want to do is to spend it on stuff that they know can't work.

There is only one answer to this:

HAHAHAHAHA HAHAHAHA!And 'survivle', yet!HAHAHAHA HAHAHAHAHAhh! AHhahahahah HAHAHAHA AHahahaha HAHAHA!And we're naive, dear God! HahahahHAHAHAHA! But he knows where the bodies are buried! HAHAHAHahahaha! And proves it by asking what entanglement is HAhahahaHAHAHA. HAHAHAHAHA. Oh,hahahahaaahaha. Hee hee. Oh dear, oh deary me.

DS · 19 November 2008

Dan wrote:

"I would be most happy to send him/her a copy as well, as it’s clear from his/her comments that he/she hasn’t read it: Several of the questions he/she raises as deep issues are dealt with in the paper by a few lines of arithmetic."

Thanks for coming here to explain the paper Dan. However, you would definately be wasting your time with this troll. Of the hundreds of papers presented to it, (many with free links provided), it has never ever shown any evidence whatsoever of having actually read a single one. It appears to be emotionally incapable of reading a paper and intellectually incapable of understanding one. I strongly suggest that you and everyone else simply ignore it. If you do send it a reprint, we would all love to know it's name and address.

If the troll persists in infesting this thread and PZ allows this to continue, I guess we could always post the lists of it's psychological problems, creationist tactics and areas where the troll has demonstrated a complete lack of knowledge. If it wants to discuss string theory, it should go to a physics site and see how long they tolerate it's ignorant nonsense.

As for the longeviety argument, according to this logic, human females should be able to reproduce until they are 80. Maybe the troll is trying to convince us that that would be desirable. Of course time to first reproduction is a much more important demographic parameter, so I guess it would also claim that human females should start reproducing at about age 9. Now I wonder why it would want that. I'm sure that this will induce a jumping monkey, barking dog hissy fit from the troll. I can't wait.

fnxtr · 19 November 2008

Isn't living long enough to replace oneself the kind of good enough "survivle" (chuckle) strategy nature settles for?

Stanton · 19 November 2008

If scientists studying Evolutionary Biology and or Abiogenesis really did engage in the ridiculous obfuscation and daggers SB is accusing them of, not only would these scientists not have any time to engage in any research, we would have catastrophes akin to Stalin's famines started by Lysenko, or the academic implosions created by the Korean stem cell clone fiasco every other day for decades.
Dave Luckett said: "By suppressed I’m referring to data bias in publish papers omitting contradicting data (bad science)in order to get publish by politically motivated money." Insofar as I am able to decipher this editor's nightmare, you are telling us that scientists deliberately omit data, because they and scientific publications are engaged in a conspiracy deliberately to deceive the trusting public, because someone is making money out of this. That is, corporations and governments are investing in research that they know is going to produce misinformation. They do not want real information about the real world because as everyone knows, corporations and governments do not ever concern themselves with results, especially those that involve money. Indeed, all they want to do is to spend it on stuff that they know can't work. There is only one answer to this: HAHAHAHAHA HAHAHAHA!And 'survivle', yet!HAHAHAHA HAHAHAHAHAhh! AHhahahahah HAHAHAHA AHahahaha HAHAHA!And we're naive, dear God! HahahahHAHAHAHA! But he knows where the bodies are buried! HAHAHAHahahaha! And proves it by asking what entanglement is HAhahahaHAHAHA. HAHAHAHAHA. Oh,hahahahaaahaha. Hee hee. Oh dear, oh deary me.

David Utidjian · 19 November 2008

SB said: Who want to explain to me what "Entanglement" is?
Woah... you are really jumping around here. First you want to talk about Thermodynamics and Evolution, then String Theory, and now Entanglement? I may have missed a few branches in this thread but... oh whatever. By "Entanglement" I assume you mean Quantum Entanglement, yes? Quantum Entanglement is not really part of of String Theory and is certainly not part of Evolution Theory, nor Thermodynamics, nor of any Intelligent Design theory that I have ever heard of. Perhaps we should try and stick to one (or three?) topics here. Perhaps we should try and stick to Thermodynamics, Evolution, and whatever you think ID theory can bring to the discussion, yes? If you would like to discuss Quantum Entanglement you may want to start by reading the brief introduction on Wikipedia: http://en.wikipedia.org/wiki/Quantum_entanglement If you want to go further with Quantum Entanglement you can click on my name at the top of this post to get a web page with my email address. -DU-

Richard Simons · 19 November 2008

SB said: One example, survivle of the fittest is a foundation stone in evolution.
It is? How remiss of me. In the general biology course I am teaching I am nearing the end of the section on evolution and I haven't mentioned 'survival of the fittest' once.

Henry J · 19 November 2008

It is? How remiss of me. In the general biology course I am teaching I am nearing the end of the section on evolution and I haven’t mentioned ‘survival of the fittest’ once.

Well, then you'd better hurry up and get a round tuit !!!111!!!one!!!

Mike Elzinga · 19 November 2008

I would be most happy to send him/her a copy as well, as it’s clear from his/her comments that he/she hasn’t read it: …

— Dan Styer
It probably won’t do any good, Dan. We’ve seen this pattern of behavior by trolls too many times on various threads here on Panda’s Thumb. There are a number of trolls out there who come here to take advantage of the generosity of scientists who attempt to patiently explain concepts to curious laypersons. Then, after the discussion has gone on for a while, these trolls start going really loopy. SB is apparently one of them. We have seen this particular language, misspelling, and taunting before. Other trolls are probably ID/Creationists full of vile hatred who are attempting to “get back at” the scientific community. Going out and shooting someone might get them in trouble, so they come here and harass. Others may simply be updating their pseudo-science shtick and practicing their counter arguments to the latest updates by pseudo-science watchers of the ID/Creationist pseudo-science activity. Then there are those who seem to have no other agenda than to just mess with people’s heads (the dopy “Messin’ with Sasquatch” routines). Most of the ID/Creationist pseudo-science seems to have been thoroughly debunked. The leaders of these movements don’t come here to argue any more. They apparently have simply intensified their stealth activities among their followers in churches and state legislatures. At any rate, your paper is great and timely. It appears that the ID/Creationists have been trying to resurrect their “entropy shtick” with a new version called “genetic entropy”.

DS · 19 November 2008

Entanglement, yea, that's when you get entangled in a discussion about a topic and suddenly realize that you are dealing with experts who all know a lot more than you do. In a vain attempt to distract attention away from the fact that you have no idea what you are talking about, you desperately try to change the subject to anything else. Of course that strategy never works and eventually you are shown up for the slack jawed poser that you are.

Everyone should remember why Wayne labelled this jumping monkey SFB in the first place.

David Utidjian · 19 November 2008

SFB? I did a search for SFB and got no hits.

I must have missed the thread Wayne was referring to.

-DU-

Henry J · 19 November 2008

It's this one: http://pandasthumb.org/archives/2008/09/luskin-and-the-2.html
2696 comments (90 pages) before it got cut off.

iml8 · 19 November 2008

Mike Elzinga said: At any rate, your paper is great and timely. It appears that the ID/Creationists have been trying to resurrect their “entropy shtick” with a new version called “genetic entropy”.
"Genetic entropy" is more along the lines of the old Darwin-basher argument of "there are no constructive mutations" -- which is admittedly an elaboration of the old "there is no such thing as a free lunch(a Designer has to give it to you)" entropy arguments. It seems that information theory has been lined up as the successor to the 2nd Law of Thermodynamics, enshrined as the "law of conservation of information (LCI / information can only arise from intelligence)". Most try to just imply it and not come right out and say it -- unlike the 2nd Law of Thermodynamics, the LCI doesn't have enough substance to mangle. Dembski, always assertive (credible is another thing), has explicitly stated the LCI as part of an effort to establish it by declaration. White Rabbit (Greg Goebel) http://www.vectorsite.net/gblog.html

Mike Elzinga · 19 November 2008

It seems that information theory has been lined up as the successor to the 2nd Law of Thermodynamics, enshrined as the “law of conservation of information (LCI / information can only arise from intelligence)”. Most try to just imply it and not come right out and say it – unlike the 2nd Law of Thermodynamics, the LCI doesn’t have enough substance to mangle.

— iml8
Part of the tactic seems to be one of dangling enough hints and innuendo out there so that the followers will make the inferences and do the dirty work. The tactic is clearly consistent with all the emotional associations that are found frequently in fundamentalist sects that attempt to link “the enemy” to whatever the leaders of those sects want to demonize. When they are pressed, the ID/Creationists will claim that they didn’t explicitly make the associations that were being made, but it has certainly been the case that many of their followers do make these associations and run with them. The “Law of Conservation of Information” certainly falls into that category; as does “genetic entropy”.

Dan Styer · 19 November 2008

SB said: Who want to explain to me what "Entanglement" is?
I would love to explain entanglement to SB or to anyone else. The explanation is in my book The Strange World of Quantum Mechanics. However, since this is a thread on evolution and entropy, and entanglement is not related to either, I'm at a loss as to why you brought it up.

Mike Elzinga · 19 November 2008

But that aside, I’ve yet to hear of any evidence that abiogenesis required something outside of known physics and chemistry.

— Henry J
I offered a few rules of thumb on another thread some time ago, but I can’t remember the thread in order to provide a link to it. So here they are again. One can find the relevant energies associated with different physical phenomena by a few simple calculations and some reference points. The following are very rough guidelines. The energies, in electron volts (eV) associated with the structures of condensed matter can be estimated by the absolute temperatures at which things melt (i.e., the binding energies of condensed matter) from E = (1/2)kBT, where kB = 8.617 x 10-5 eV/K, is Boltzmann’s constant. Life on Earth exists approximately within the temperature range of liquid water (273 K to 373 K), i.e., roughly within an energy range of 0.012 eV to 0.016 eV. Typical binding energies for solids run roughly in the vicinity of 0.1 eV to about 0.3 eV. Chemical bonds run in the energy ranges of about 1 to 2 eV (think of a dry cell battery at 1.5 eV). The energy required to completely ionize a hydrogen atom is 13.6 eV. Nuclear binding energies are in the range of millions of electron volts (MeV). The structures of protons and neutrons run in the vicinity of the masses of these particles in eV which are on the order of 1000 MeV. String theory starts dealing with masses on the order of the Planck mass (1019 times the mass of the proton, or on the order of 1022 Mev). Using these rough guidelines, one can see the ridiculousness of SB’s attempt to steer the discussion into string theory.

tresmal · 19 November 2008

"Survival of the fittest" is a cornerstone of hack popularizations of evolution. We thus learn something of your sources. It is also popular with those seeking to rationalize ruthless behavior, or to associate such behavior with Darwin, and thus discredit him.
Evolutionary theory as understood by scientists is more concerned with reproductive success. There is some advantage to longer life spans in this regard, but not as much as you might think. First animals don't die of old age that often in nature. Predation, disease, starvation and other hazards kill most animals before they get a chance to get old. A mouse with the capability to live to 100 doesn't get much advantage out of it if has only a trivial chance of going two years without getting eaten. Second, there are tradeoffs. Resources have to be expended in longer life spans. If the "investment" doesn't pay off in greater reproductive success, it won't be selected for.


tresmal · 19 November 2008

I suspect that I have a significantly weaker understanding of physics than most of the commenters on this thread. So I will take a shot at entanglement.

Electrons have a property called spin, which can be either "up" or "down". Two electrons sharing an orbit* around an atom cannot have the same spin. Separate a pair to some distance apart and a change in the spin of one will instantly(?) change the spin of the other.




* I know they are really more like clouds whose shape and extent reflect the probability of a particular electron being in a particular spot. Something like that. :)

Wheels · 19 November 2008

SB said: One example, survivle of the fittest is a foundation stone in evolution. The better the organism is at surviving the better the chances of survivel. Longevity fits into that equation, the longer the organism survives the more chances it has to procreate.
Except that having the same organisms procreating over and over can give less chance for variation than having many successive generations in the same span of time, since changes in the genome probably accumulate faster if there is more accumulating done. If the older generation sticks around long enough and procreates rapidly enough, they would also run the risk of depleting all the environment's available resources in very short order without severe predation or some other pressure limiting the number of offspring that survive to sexual maturity. There are selective pressures that can favor short lifespans over long ones, especially in less stable environments where the demands for survival are rapidly mutable. Fast living can be remarkably successful. In fact this approach is so very good that it's the "strategy of choice" for the vast majority of life on Earth (in terms of either numbers of species or in sheer mass), from Monera to insects to annual flowering plants. Organisms that survive for more than their first go or two at procreation seem to be the exception rather than the rule. Perennial plants (e.g. trees) and most vertebrates are the most visible examples, in fact they are so very visible that it's easy to forget how rare their outstanding individual longevity really is among the natural world. It probably also doesn't hurt this mis-perception that we humans are among the rare.

Wayne Francis · 19 November 2008

Science Avenger said: .... Oh, BTW troll: 1) one does not assign empirical values, one measures them. One assigns arbitrary values. ....
If SB == SFB then don't go down this path. He already has shown he doesn't know what "arbitrary" means. He thinks that something that is arbitrary can be logical

Dave Luckett · 19 November 2008

Prediction: having explained what entanglement is, you will now be asked to provide causation, eg: What is "spin" and why does it cause entanglement? Or some such. And if you explain that, you will be asked for yet more ultimate causes, and so on. If, in this process, you reach the boundaries of knowledge, the troll will smirk and declare itself the winner. Notice that this requires almost no effort on its part, while subjecting you to ever-increasing amounts of hard work. It also has the joy of knowing that you are doing its will, which provides it with much gratification and validation. Trolls just love this stuff.

Trolls long ago learned the lesson that every three-year-old learns - that you can keep on asking "why?" forever, and that it's a good game. They have not learned the lesson that most adolescents learn before they cross the boundary into adulthood - that knowing something doesn't mean knowing either everything or nothing, that any real knowledge is valid and valuable in itself, and that not being able to explain everything does not invalidate the explanations we actually have.

Wayne Francis · 19 November 2008

SFB a.k.a. SB said:
eric said:
SFB a.k.a. SB said: I do have a problem when valid empirical science is suppressed or ignored resulting in making a viable scientific theory bad. There is additional theoretical evidence (indirectly) giving support ID, how are you with the string theory?
I'm with David - please, enlighten us. We are waiting with bated breath for your exposition of what science is being suppressed, and how string theory supports design. I assume the latter with be math-lite, as you have so far been unable even to solve for dS to support your contentions, so string theory is a foregone conclusion.
By suppressed I'm referring to data bias in publish papers omitting contradicting data (bad science)in order to get publish by politically motivated money. Anyone who says it is not happening is naive or untruthful. One example, survivle of the fittest is a foundation stone in evolution. The better the organism is at surviving the better the chances of survivel. Longevity fits into that equation, the longer the organism survives the more chances it has to procreate. So by pure logic life expectancies should show a trend of increasing over time. That evidence is not there, along with a multitude of other evolutionary anomalies (The Hobbit?)Denying or omitting these anomalies in a published paper is data bias and suppression. Who want to explain to me what "Entanglement" is?
SFB longevity != the more chances it has to procreate. Humans females in Canada are likely to live for 40 years after they no longer procreate. Humans are not the only ones with this trait. Success doesn't need to equate to longevity either. Cephalopod in general develop fast and die young. They are very successful. A better explanation is a species that is better suited to its environment is more likely to survive, as a species. Are humans suited to our environment? Well we are killing off our environment very quickly. I would argue that we are not suited to our environment and eventually, if we don't smarten up, our species will be adversely effected by it. I think we already are if you look at humans as a whole. The trend should be what works for a species should be refined over time given the same environment. IE a species will generally come to an optimal breeding cycle for the given environment. Going back to humans a 20 year old woman is better for reproduction then a 40 year old woman. While the 40 year old woman can still have children in many cases the likely hood the the child from the 20 year old will be more fit then the 40 year old's child. Sorry SFB, your understanding of survival, notice the spelling SFB (you messed up the spelling twice and in 2 different ways), of the fittest is flawed.

Wayne Francis · 19 November 2008

David Utidjian said: SFB? I did a search for SFB and got no hits. I must have missed the thread Wayne was referring to. -DU-
missed it? That's like saying "I must have missed the nuclear bomb going off outside of my house" :P

Mike Elzinga · 19 November 2008

Notice that this requires almost no effort on its part, while subjecting you to ever-increasing amounts of hard work. It also has the joy of knowing that you are doing its will, which provides it with much gratification and validation. Trolls just love this stuff.

— Dave Luckett
This has also been the strategy of their choreographed debates along with the development and polishing of the “Gish gallop”. At the end of it, the ID/Creationist smirks along with his adoring audience and proclaims “Well, you haven’t answered 99% of my arguments”. They also tie the hands of the scientist by making him agree before the debate not to link ID/Creationist pseudo-science to religious doctrines and motives or explore the shortcomings of ID/Creationism.

Henry J · 19 November 2008

"Survival of the fittest" is of course an oversimplification.

A more accurate phrase would be something like differential reproductive success among genetic variations within populations.

Then add to that that there are various ways that genetic variation can get produced in a population (mutations of various types, recombination, horizontal transfer, hybridization, plus any others that I may have missed).

Henry

tresmal · 19 November 2008

As you probably know this post was cross posted at Pharyngula. Anyway there is a YECer troll commenting for few hours every day starting at comment #507, and oh boy, he's a live one.

As regards to SB = SFB. It seems to me to be about even money. On the one hand there is his casual disregard for English, his confident but slightly off use of technical terms, the way he is simultaneously hostile to, yet seeking the validation of, science, his unsubstantiated claims of superior knowledge, his refusal to back up any of his claims with math or anything else, etc. On the other hand he is more verbose than SFB, there isn't the usual long stream of one line comments, he hasn't threatened to report this site to the net nannys, he hasn't copypasted long comments in their entirety only to append a one line nonsense rebuttal and he seems to know a little bit more than SFB. One possibility is that it is SFB and that he is making an effort to change his MO. Another is that he is a different person with many quirks in common with SFB.

Henry J · 19 November 2008

missed it? That’s like saying “I must have missed the nuclear bomb going off outside of my house” :P

Well, it had been off the front page for a long time before it got closed, so it's presence wasn't obvious since then except while its last reply was among the last ten (thought granted, that may have been a sizable portion of the time while replies were still allowed). Henry

eric · 20 November 2008

A quibble - while I'd agree with you that hacks focus on this phrase, your characterization of it as a popularization is not true. The phrase is a legit reference to (the original definition of) natural selection, and in fact the chapter in Origin where Darwin introduces natural selection is titled "Natural Selection; Or The Survival of the Fittest." Though as Henry noted, we've come up with better definitions of natural selection in the last 150 years. So when a poster refers back to Darwin's original ideas rather than what is currently taught, it's a fairly good indication that you're dealing with a Creationist rather than an innocent lurker.
tresmal said: "Survival of the fittest" is a cornerstone of hack popularizations of evolution. We thus learn something of your sources. It is also popular with those seeking to rationalize ruthless behavior, or to associate such behavior with Darwin, and thus discredit him.

Stanton · 20 November 2008

eric said: Though as Henry noted, we've come up with better definitions of natural selection in the last 150 years. So when a poster refers back to Darwin's original ideas rather than what is currently taught, it's a fairly good indication that you're dealing with a Creationist rather than an innocent lurker.
That SB characterizes scientists studying Evolution and Abiogenesis as engaging in "propagating bad science (and non-science)" strongly suggests that he is a Creationist or Intelligent Design proponent.

Henry J · 20 November 2008

When Darwin said "survival of the fittest", did he indicate that he was referring to individuals or to varieties within the population? My understanding of current theory is that "survival of the fittest varieties" might not be too far off from "differential reproductive success", although the latter seems more precise.

Henry

Mike Elzinga · 20 November 2008

tresmal said: As you probably know this post was cross posted at Pharyngula.
That discussion could have benefited from some of the discussion that has taken place here. It’s now too far derailed. But Sean Carroll in comment 12 on that thread is obviously puzzled about the common confusions about order, information and entropy that is rampant in discussing life. Here is his comment.

It's not strictly right, as you point out, as he's trying to give the creationists every benefit. But there is a problem in identifying the "reduction in the number of microstates" from one generation to another, because it's not precisely the same degrees of freedom being re-arranged. I wonder if it's possible to fix that part up just a bit. (You'd get the same conclusion, obviously.)

— Sean Carroll
As I pointed out earlier, using the Boltzmann expression to find the change in entropy of a living organism effectively takes the ratio of the number of energy states at the end to the number of energy states at the beginning of the interval of time. This means the whether entropy refers to the number of microstates or to order makes no difference. If the number of microstates is proportional to order, this proportionality cancels and we don’t have to know what the connection is. What we know (and Dan Styer’s calculation simply makes it more convincing) is that life does not violate the laws of thermodynamics. The ID/Creationist’s sham is glaringly obvious. However, what we now should be more aware of is the fact that living organisms are complex. What we mean by complex has also been a source of confusion. So has what we mean by order. What does complexity or order have to do with the existence of what we call life in a collection of organic molecules? Are we on the wrong set of concepts in trying to figure out how abiogenesis occurred? I would suggest that the discussion that is taking place (among laypeople, at least) is sending people off on the wrong paths in their thinking. The studies of microscopic systems in physics are far different from the impressions we are getting from these discussions in the popular media.

eric · 20 November 2008

Henry J said: When Darwin said "survival of the fittest", did he indicate that he was referring to individuals or to varieties within the population? My understanding of current theory is that "survival of the fittest varieties" might not be too far off from "differential reproductive success", although the latter seems more precise.
Henry, I've included the relevant quote below. My reading is that he's talking about varieties. The paragraph also shows that Darwin considered the terms 'natural selection' and 'survival of the fittest' to refer to the same process.
Again, it may be asked, how is it that varieties, which I have called incipient species, become ultimately converted into good and distinct species, which in most cases obviously differ from each other far more than do the varieties of the same species? How do those groups of species, which constitute what are called distinct genera and which differ from each other more than do the species of the same genus, arise? All these results, as we shall more fully see in the next chapter, follow from the struggle for life. Owing to this struggle, variations, however slight and from whatever cause proceeding, if they be in any degree profitable to the individuals of a species, in their infinitely complex relations to other organic beings and to their physical conditions of life, will tend to the preservation of such individuals, and will generally be inherited by the offspring. The offspring, also, will thus have a better chance of surviving, for, of the many individuals of any species which are periodically born, but a small number can survive. I have called this principle, by which each slight variation, if useful, is preserved, by the term natural selection, in order to mark its relation to man's power of selection. But the expression often used by Mr. Herbert Spencer, of the Survival of the Fittest, is more accurate, and is sometimes equally convenient. We have seen that man by selection can certainly produce great results, and can adapt organic beings to his own uses, through the accumulation of slight but useful variations, given to him by the hand of Nature. But Natural Selection, we shall hereafter see, is a power incessantly ready for action, and is as immeasurably superior to man's feeble efforts, as the works of Nature are to those of Art. Charles Darwin, On the Origin of Species, Chapter III

Henry J · 20 November 2008

What does complexity or order have to do with the existence of what we call life in a collection of organic molecules? Are we on the wrong set of concepts in trying to figure out how abiogenesis occurred?

Yep. Since changes in entropy related to evolution are a tiny fraction of those related to mere growth, and those are a tiny fraction of the total changes in entropy of the system, I'd conclude that entropy is not really the determining factor in biology or abiogenesis. Maybe for some particular chemical reactions along the way, it might be, but not for the overall system. Henry

tresmal · 20 November 2008

Not to nitpick, but I believe it was Spencer not Darwin who came up the phrase "survival of the fittest".

eric · 20 November 2008

Henry J said: ...changes in entropy related to evolution are a tiny fraction of those related to mere growth...
Good idea for a follow-up calculation! How does the entropy associated with an "information adding" point mutation compare to the entropy associated with developing a single cell into a mature human? According to creationists, the former is not allowed by the 2LOT but the latter is. So the entropy of the former must be more negative than the latter. I bet its not. Actually since amino acids are 3-letter "words" you could hypothetically calculate the entropy associated with every possible single point mutation (GAG to GTG, etc...) Presumably the mutations that "add information" will be instantly apparent from their enormously huge negative entropy values. Heh. :)

Henry J · 20 November 2008

The problem there would be separating the entropy increase of beneficial mutations from those of neutral or detrimental ones. Off the top of my head, I'm guessing that there isn't any significant correlation between benefit/detriment and affect on entropy for the various types of mutations.

Henry

Mike Elzinga · 20 November 2008

Henry J said: The problem there would be separating the entropy increase of beneficial mutations from those of neutral or detrimental ones. Off the top of my head, I'm guessing that there isn't any significant correlation between benefit/detriment and affect on entropy for the various types of mutations. Henry
I agree; and this can be demonstrated with many systems that are much simpler and non-living. Take the “simple” case of low-temperature superconductivity, for example. Here the collective interactions of the phonons (lattice vibrations of the atoms) with the electrons in the conduction band results in what are called “Cooper pairs” in which electrons of opposite spin are paired up and form a Bose-Einstein condensation into a superconducting state. No one doubts that the overall entropy of the universe increases in this phenomenon. One could say that there is a high degree of “organization” or “order” generated in superconductivity, but these terms are seldom used in discussing this “esoteric” phenomenon. The Bardeen, Cooper, Schrieffer theory describes this process in terms of well-known physical concepts. There are no violations of any laws of thermodynamics anywhere in this process. The point here is that we know about all kinds of physical/chemical systems in which emergent phenomena occur that are unpredictable from underlying processes before the fact, but which can subsequently be understood as a result of those underlying processes after the fact once we have studied and understood the emergent phenomenon. This very likely will be the case when we discover what early living systems looked like. It is this process of discovery that I see being misrepresented by the ID/Creationists and unconsciously being picked up and argued by laypeople on these forums.

eric · 20 November 2008

Henry J said: The problem there would be separating the entropy increase of beneficial mutations from those of neutral or detrimental ones.
That's not the problem, that's the point! The entropy associated with the (e.g.) GTG -> GAG substitution will be the same regardless of the ultimate fitness value that mutation brings to the organism. The molecular properties of the system determine whether the substitution is kinetically and termodynamically possible; not how that system will be used in future development. This is what makes the creationist argument such complete, utter rubbish.

Mike Elzinga · 20 November 2008

eric said:
Henry J said: The problem there would be separating the entropy increase of beneficial mutations from those of neutral or detrimental ones.
That's not the problem, that's the point! The entropy associated with the (e.g.) GTG -> GAG substitution will be the same regardless of the ultimate fitness value that mutation brings to the organism. The molecular properties of the system determine whether the substitution is kinetically and termodynamically possible; not how that system will be used in future development. This is what makes the creationist argument such complete, utter rubbish.
I think you, Henry and I are alluding to the same general ideas here but saying them in different ways. Taking your specific example (and being sure we are talking about the energy exchanges with the surroundings and not spatial order) I believe we agree that the physics and chemistry of any molecular swapping will most likely increase entropy As the energy is released from breaking and making bonds, energy is going to go out in the form of photons or in the form of phonons as ripples dissipate energy along the molecular chains or perhaps as energy is transferred to some other molecules depending on the process. So the underlying physics and chemistry are not in question. Where we start seeing the issues arising, is with your “information adding point mutation comparison to the entropy associated with developing a single cell into a mature human”. This is where the murky confusions about “information” or “order” start clouding the discussions. It is here where the mechanisms of selection come into play. I like to use some simple analogies from dendritic growth to ask questions about “information” contained in a specified dendrite relative to other possibilities that could have developed had environmental contingencies been different. How much more information is contained in that particular dendrite compared to any other dendrite that might have developed? This raises the important question of just how much information “accumulates” in a particular line of development. And, if this “information” has any meaning, what is it about? Maybe we are looking at it the wrong way, and it is this wrong perspective that makes the issue of development from single cell to mature adult animal or plant (or the emergence of new species) appear more difficult than it is. This is somewhat related to the “paradox” of the lottery winner (the probability that a specified individual would win instead of the probability that someone would win). Henry was saying that, off the top of his head, he suspects there may be little correlation between the entropy increases associated with growth and development from a specific initial state to any of the various possible specific outcomes of this growth and development in a contingent environment (with selection). I believe that is also what you were alluding to; am I correct? If so, I believe this begins to get to the heart of these issues.

Dan Styer · 20 November 2008

Henry J said: When Darwin said "survival of the fittest", did he indicate that he was referring to individuals or to varieties within the population?
It was Herbert Spencer, not Charles Darwin, who characterized the mechanism of evolution as "survival of the fittest". Darwin, never a great debater or word-smith or sound-bite generator, used the less sexy "natural selection". After Spencer coined and popularized the term, Darwin adopted it, but it didn't appear in Origin of Species until the fifth edition.

Sylvilagus · 20 November 2008

eric said:
Henry J said: ...changes in entropy related to evolution are a tiny fraction of those related to mere growth...
Good idea for a follow-up calculation! How does the entropy associated with an "information adding" point mutation compare to the entropy associated with developing a single cell into a mature human? According to creationists, the former is not allowed by the 2LOT but the latter is. So the entropy of the former must be more negative than the latter. I bet its not.
Not to further muddy the waters, but that isn't really the typical creationist argument. Theirs is even sillier than that. Most creationists would argue something like that the difference between the "info adding" mutation and human development is not amount of entropy, but the nature of the system. Most would probably gladly accept that the growth of fertilized egg to adult human involves much more decrease in entropy, but in their minds, human development is possible because of an intelligently designed "energy transfer system" that allows "order" to increase despite the 2LOT; they pretty much take it as a given that "life" can work against entropy because it is "life". Mutations are seen as unplanned and hence incapable of working against entropy. The same with abiogenesis. It all comes back to this ridiculous notion that there are exceptions to 2LOT for intelligence or some such nonsense. Sylvilagus

Mike Elzinga · 20 November 2008

Not to further muddy the waters, but that isn’t really the typical creationist argument. Theirs is even sillier than that.

— Sylvilagus
And this is why it is important to keep in mind that famous aphorism, "If an ID/Creationist tells you that the sky is blue, you had better go outside and check."

eric · 21 November 2008

Mike Elzinga said: Henry was saying that, off the top of his head, he suspects there may be little correlation between the entropy increases associated with growth and development from a specific initial state to any of the various possible specific outcomes of this growth and development in a contingent environment (with selection). I believe that is also what you were alluding to; am I correct?
Yes. The critical point here is that physical laws don't see past history or the future. Invoking "intelligence" as a reason why some reactions can occur but not others violates the first part of this point - it requires a molecular system know how it was created. Invoking the value to the organism (i.e. beneficial mutation vs neutral or deleterious) violates the second part - it requires a molecular system know how it will be used. At the risk of using technical terms inappropriately, one way of phrasing the creationist's error is to say that they don't understand that state functions are path-independent.

DS · 21 November 2008

Eric wrote:

"At the risk of using technical terms inappropriately, one way of phrasing the creationist’s error is to say that they don’t understand that state functions are path-independent."

Exactly. That makes creationist arguments nothing more than begging the question. For example, if you claim that "there are no beneficial mutations", then logically an intelligence is required. After all, when mutations arise they may be deleterious, but if the environment changes they may become beneficial. That means than in order for no beneficial mutations to occur, an intelligence must anticipate all possible environmental changes and for some reason prevent any changes that could ever become beneficial. There you go, all you have to do is assmue that your assumption is correct and the entire game is over.

Of course, if mutations occur randomly with respect to the needs of the organism, then no intelligence whatsoever is required and some mutations can be beneficial, whether the environment changes or not. That is exactly what the evidence shows.

Why is this so difficult for creationists to understand? How could anyone possibly think that "genetic entropy" prevents mutations form arising because they might be beneficial in some future environment? How could anyone believe in "conservation of information" when there is information in the observed allele frequencies that are produced by random mutation and natural selection? How could anyone believe in a God who willfully allowed deleterious mutations but scrupulously prevented any possible beneficial mutations? Now that would violate every known law.

SWT · 21 November 2008

DS said: How could anyone believe in a God who willfully allowed deleterious mutations but scrupulously prevented any possible beneficial mutations? Now that would violate every known law.
It's not that hard to reconcile within a creationist framework, in which one could explain mutations as a result of the Fall. If one reads Genesis literally, beneficial mutations would not be needed before the Fall (since all the originally created living things were good and perfect), and deleterious mutations could be explained as the consequences of Adam and Eve violating a commandment from the Almightly. For all I know, some creationists might attribute the second law itself to the Fall; the Fall is a really convenient catch-all for anything you don't personally happen to like. BTW, has anyone else noticed the silence from SB?

fnxtr · 21 November 2008

Who? :-)

Henry J · 21 November 2008

Maybe it's like on that Jack Benny radio show - he's thinking, he's thinking?

Stanton · 21 November 2008

Henry J said: Maybe it's like on that Jack Benny radio show - he's thinking, he's thinking?
Should be:

"Your money, or your life!" *long pause* "Listen, your money, or your life!" "I'm thinking it over!"

Mike Elzinga · 21 November 2008

SWT said: For all I know, some creationists might attribute the second law itself to the Fall; ...
This would be even funnier. The second law shows that energy can be released from a system (via photons, phonons, other particles, etc.). If energy can’t be released from a system, nothing could settle down into crystalline arrays (ice and snow, for example), and no systems would work because there could be no temperature gradients for energy to flow. In other words, everything would be in a quark/gluon state. No atoms, no molecules, no life, nothing we recognize as patterns in this universe.

DS · 21 November 2008

SWT wrote:

"BTW, has anyone else noticed the silence from SB?"

Well, once it was outed there really wasn't any point in trying to argue endlessly with experts about things it knew nothing about. Sooner or later someone would have pointed out that it still hadn't read the paper.

I know, why don't we have a contest to guess the name of it's next reincarnation. I've got dibs on BS, even if that is a little obvious. How about BFS?

Alan Barnard · 12 December 2008

Daniel Styer seems to fall into the old creationist trap whereby he lets the creationists define all the terms. A very similar CREATIONIST argument is to be found here: http://www.ldolphin.org/mystery/chapt8.html

The creationist response to Daniel Styer's argument would be: "You have proved that evolution results in a decrease in entropy but you fail to explain the mechanism by which the undirected energy from the sun causes the precise molecular changes required to produce evolution and thus this decrease in entropy"

The problem goes back to the 19th century. Classical thermodynamics tells little about the behaviour of systems on an atomic scale - Boltzmann could not even prove that atoms existed. Unfortunately this has led to all sorts of nonsensical descriptions of the nature of 'entropy' - untidy desks and such-like. This has provided creationists with their background material - it is noticeable that Henry Morris himself cites no higher authority than Isaac Asimov.

'Entropy' is a term having a precise mathematical definition in physics. Its units are J/K - Energy and Temperature - nothing else. Hand-waving and talking about 'complexity' has nothing to do with it - it all comes down to hard physical terms.

Looking at Daniel Styer's calculation, the result -302 J/K. Where does the minus sign come from? If the creature evolved from its latter state into it former one, would that be changed to plus? He just seems to be playing the creationist game - more 'complexity' = less 'entropy'. He even drags in the term 'microstate', however completely misusing it.

Sometime, I would like to write a book about this - both creationists and their opponents are such a rich source of material.

Mike Elzinga · 12 December 2008

Daniel Styer seems to fall into the old creationist trap whereby he lets the creationists define all the terms.

— Alan Barnard
Much of what you are objecting to has already been discussed on this thread. I think if you go back over the entire thread, you will find that we are aware of these issues. What Dan’s calculation does is to give the creationists what they want in generous measure and then show that living systems exist in and are intricately interwoven with in environment in which entropy is increasing. Living systems simply do not violate any laws of thermodynamics and are perfectly consistent with them (as any system that exchanges matter and energy with its surroundings must be). That calculation and the discussion on this thread illustrate that the ID/Creationists are perpetuating serious misconceptions not only about what entropy is, but that there is some kind of “entropy barrier” to evolution. These arguments are wrong, and they are irrelevant red herrings designed deliberately to sound scientific and confuse the public.

The creationist response to Daniel Styer’s argument would be: “You have proved that evolution results in a decrease in entropy but you fail to explain the mechanism by which the undirected energy from the sun causes the precise molecular changes required to produce evolution and thus this decrease in entropy”

Obviously this would be another misrepresentation by the creationists. What would the creationist mean by “decrease in entropy” without betraying further misconceptions about what entropy is? In fact, as Sean Carroll also noted, and as the discussion that followed indicates, there may not be a consistent relationship between entropy (essentially the multiplicity of energy states) and the “complexity” or “order” in living organisms. Parts of the organism (e.g., its genome) might be seen as some kind of quasi-crystal in which a given set of molecules or atoms occupy a diminished number of energy states. However, no set of atoms or molecules can condense into a smaller number of energy states without giving up energy to its surroundings. Those energy states that carry energy away from the subsystem of molecules or atoms of interest into the surrounding environment are the reason total entropy increases even though the entropy of the subsystem decreases. This is true at every level of complexity in condensed matter. But the relationship between entropy and organization or order or information or complexity is ill-defined and is very likely meaningless in the context of living systems. It misdirects the focus of what is important in the definition of living organisms and how they are related to the entire environment. ID/Creationists have been trying to dominate and define the discussion for decades. All they have done is create confusion. The actual physics and chemistry of life is far more interesting but doesn’t find its way into these discussions because of all these creationist pseudo-science diversions. In fact, most of the science of condensed matter, emergent phenomena, of autocorrelations or phase-locking of phenomena never appears in discussions with creationists. They never take the time to learn the science. Instead they quote-mine and invent words and misconceptions. We have seen this process take place in real time.

Bob Enyart · 12 December 2008

PZ Myers' and Styer's articles are being debated at the popular (1.1M posts) religious forum at:
http://www.theologyonline.com/forums/showthread.php?t=53199

It's gettin' feisty!

-Pastor Bob Enyart
KGOV.com

Mike Elzinga · 12 December 2008

Bob Enyart said: PZ Myers' and Styer's articles are being debated at the popular (1.1M posts) religious forum at: http://www.theologyonline.com/forums/showthread.php?t=53199 It's gettin' feisty! -Pastor Bob Enyart KGOV.com
Sheesh! Flying over that website is like flying over a cargo cult.

Alan Barnard · 13 December 2008

I have no access to Daniel Styer's paper at the moment so I can only go by PZ's extracts from it, but, if PZ has rightly represented it, I would say that it is complete nonsense of the same order as the chapter from the book on idolphin.org Any argument concerning a discrepancy between evolution and the second law of thermodynamics has got to start with an absolutely precise definition of entropy. You can use a definition from quantum physics or one from classical thermodynamics (though beware of stretching the latter beyond its legitimate field of application). That definition is the rock upon which your argument stands. I said:
The creationist response to Daniel Styer’s argument would be: “You have proved that evolution results in a decrease in entropy but you fail to explain the mechanism by which the undirected energy from the sun causes the precise molecular changes required to produce evolution and thus this decrease in entropy”
And you replied:
Obviously this would be another misrepresentation by the creationists.
Actually, I would say that the creationist is in the right here. Daniel Styer has fed him with a quantity of entropy (-302 J/K) and he would be quite justified in asking where has it gone - the fact that it is a rather small quantity is beside the point. The real test of a change in entropy due to evolution would be to take the evolved creature and its ancestor and cool both down to absolute zero and measuring the absolute entropy of each specimen. Obviously this is a nonsense because you would somehow have to isolate the portion of the creatures' anatomies that actually contain the supposed entropy change - perhaps he is referring to the entropy change in a single strand of DNA - it does not really matter - if a change in entropy is supposed to have occurred, then at least in principle, that change should be a measurable quantity. But does evolution produce a positive or a negative change in entropy? Daniel Styer has arranged his calculations to force a negative result - in accordance with creationist thinking. But does the theory of evolution have a direction? Is it devolution when the whale lost its legs? Did entropy increase on that day? I think not - but then I think that his calculations are not based on sound physics. The problems of arguing against the creationist case are two-fold. Firstly the creationist argument depends on the creationist and the listener not understanding, indeed totally misunderstanding, thermodynamics. Secondly the listener always seems to respond by assuming that the creationist has only somewhat misrepresented the science and can be corrected by a few remarks about 'open systems', crystals, oak trees and the like. This is like cleaning the Augean stables with a teaspoon. Unfortunately it is impossible to argue with the creationist because he would rather accept Henry Morris as the word of God than the realities of science. We have a Professor of Thermodynamics (not far from where I write) who actually believes this creationist nonsense about the second law http://www.answersingenesis.org/articles/2007/02/12/just-add-energy

Mike Elzinga · 13 December 2008

I have no access to Daniel Styer’s paper at the moment so I can only go by PZ’s extracts from it, but, if PZ has rightly represented it, I would say that it is complete nonsense of the same order as the chapter from the book on idolphin.org

— Alan Barnard
I have Dan’s paper (As a member of AAPT, I get AJP). There is absolutely nothing wrong with his definition of entropy; you can be assured he knows exactly what entropy is. In addressing the so-called entropy argument of the creationists, Dan is explicit in his paper about the misconception that the creationists use, and he uses the correct definition in his calculation. If you read my previous posts, you will note that he makes an extremely generous assumption on how much the entropy decreases as a result of evolution for all life on the planet. By using the Boltzmann expression for the change in entropy, he is taking the ratio of the number of available energy states at the end of a second to the number of available energy states at the beginning of a second. As I mentioned before, the fact that it is a ratio means it makes no difference if the numbers are actually available energy states or are the erroneous spatial order assumed by creationists. If the number of available states is proportional to spatial order, the proportionality cancels and we don’t have to know the connection.

The creationist response to Daniel Styer’s argument would be: “You have proved that evolution results in a decrease in entropy but you fail to explain the mechanism by which the undirected energy from the sun causes the precise molecular changes required to produce evolution and thus this decrease in entropy”

As I said before, this so-called argument misrepresents reality. It is the creationist tactic of dictating the territory and assumptions on which a debate is going to take place. It is the tactic of Duane Gish in throwing out some absurd mischaracterizations of science to lure a scientist into a debate, and then to launch into the “Gish Gallop” of repeatedly throwing out nonsense and then finishing off the debate with “Well, you haven’t explained even a tenth of my arguments.” We all know the drill. In reality, there is no “mechanism by which undirected energy from the sun causes the precise molecular changes required to produce evolution and thus this decrease in entropy.” It is a bogus postulate; simply another sneering challenge that “you haven’t explained why tornados in junkyards don’t produce Boeing 747s.” Or “you haven’t explained why you haven’t stopped beating your wife.”

But does evolution produce a positive or a negative change in entropy? Daniel Styer has arranged his calculations to force a negative result …

Dan simply used the claims of the creationists against them. It has been the creationists who have been insisting that thermodynamics “proves that everything tends toward disorder”. It is they who have invented “entropy barriers” and “genetic “entropy”. All Dan did was to show that even if the entropy of life decreased (and, by taking a ratio, eliminated any argument over whether it is entropy or order) it remains consistent with the laws of thermodynamics. Life doesn’t violate thermodynamics just because ID/Creationist misconceptions say it does. Dan’s paper doesn’t get into any specific details about whether or not entropy really does decrease in the evolution of living organisms. Those of us in the physics, chemistry and biology communities make no such assumptions. In fact, from everything we know about simpler precursors to life, it is unlikely that there will be any clear relationship between entropy and evolution. Why should there be? Evolution doesn’t require it. Why should any creature that has evolved from its ancestors have lower entropy? I have lived and worked in the scientific community for many decades, and I have never heard anyone make such a claim. One only hears these kinds of arguments in the context of debates with ID/Creationists. They are bogus creationist arguments designed to confuse and give ID/Creationists the coattails of scientists on which to leverage an illusion of credibility. We all know this drill also.

But does the theory of evolution have a direction? Is it devolution when the whale lost its legs? Did entropy increase on that day? I think not - but then I think that his calculations are not based on sound physics.

As I said before, if you go back over this thread, you will find that we are aware of this. And to repeat, nobody I know in the real scientific community makes any such assumptions about the relationship between the “entropy of a creature” and its place along an evolutionary chain. That would be a foolish assumption given what we know about all kinds of other phenomena in condensed matter at every level. Scientists in the areas of biophysics and biochemistry are looking at things much differently, and this rarely shows up in discussions with ID/Creationists.

Unfortunately it is impossible to argue with the creationist because he would rather accept Henry Morris as the word of God than the realities of science. We have a Professor of Thermodynamics (not far from where I write) who actually believes this creationist nonsense about the second law …

And I would suggest that his research along these lines is going absolutely nowhere. Unfortunately a PhD is no guarantee of freedom from foolishness.

Alan Barnard · 13 December 2008

I will have to wait until I am fit to return to school (work) and look up the article for myself.

Note to self:
http://dx.doi.org/10.1119/1.2973046

Clearly I am completely underestimating Dan.

khoa · 7 January 2009

David Fickett-Wilbar said: What I don't understand is what is meant by something having more entropy than something else. The oil and water example wouldn't have impressed me for this reason. Is there an easy way to explain it to me so I can explain it easily to others?
Entropy measures the amount of energy in a system that is not available to do work. Keep this in mind. Creationists get this wrong because they neglect to find out what entropy defines. Oil and water: Imagine combining a cup of oil with a cup of water. Initially, small droplets of oil will randomly be distributed throughout the mixture. Oil droplets will tend to seek out other oil droplets due to their non-polar nature (like reacts with like, water is polar). At equilibrium, oil will sink to the bottom because oil is heavier than water. You will find two distinct layers: water and oil. This is called hydrophobic interaction. At this equilibrium point, entropy is the highest because there is very little energy left to do work (compared to initially). Entropy has increased, satisfying the 2nd law of Thermodynamics. Yet, the system is apparently more ordered (order in terms of physical structure, not energy state). You can try to imagine the "ability to do work" in this case as the movement of oil droplets to form the final oil layer.

Mike Elzinga · 11 January 2009

Entropy measures the amount of energy in a system that is not available to do work. Keep this in mind. Creationists get this wrong because they neglect to find out what entropy defines.

— khoa
[Emphasis added] Be careful here. Entropy is related to the number of available energy microstates; not simply those in which energy is no longer retrievable. The reasons that atoms can condense into spatially ordered crystals, for example, is because excess energy can be carried into the surrounding environment by additional energy states such as photons, phonons, or other atoms or particles. The spatial order comes from the rules of quantum mechanics and any emergent phenomena that occur. What energy does do, however, is spread among all available states. If a thermodynamic system is isolated, energy distributes itself among all available states that are consistent with the macroscopic state of the system. If a formerly isolated system suddenly becomes integrated into a larger system or environment, more states become available and energy distributes among these additional states as well. The formation of crystals is an example. If the atoms that would condense into a crystal can’t find additional energy states for distributing energy, the atoms will simply scatter elastically off each other (in fact, the definition of an elastic collision is one in which energy is conserved). But the interactions among energetic atoms produce photons which become energy states carrying energy off into the surrounding environment where it can be absorbed or scattered and can no longer find its way back into the system of atoms. After the atoms begin to condense and form a liquid or solid, then phonons become available to carry away energy. If you blow on the forming crystal, atoms carry away energy. So entropy is not a measure of unavailable energy; it refers to the number of available states. One could, in principle, attempt to enumerate all those states that carried energy away to where it is no longer retrievable, but that would not be called entropy.