A devastating critique of population genetics? The Discovery Institute thinks so

Posted 4 May 2016 by

A retired European geneticist, Wolf-Ekkehard Lönnig, has made a point that he feels is devastating to population genetic arguments about the effectiveness of natural selection. In a post at the Discovery Institute's blog Evolution News and Views. He pointed to an argument he made in 2001 in an encyclopedia article. The essence of his criticism is that many organisms produce very large numbers of gametes, or of newborn offspring. Most of those must die. Then
If only a few out of millions and even billions of individuals are to survive and reproduce, then there is some difficulty believing that it should really be the fittest who would do so.
In addition, he was interviewed two days ago by Paul Nelson, in a podcast posted very recently by the Center for Science and Culture of the Discovery Institute, on their blog Evolution News and Views. You will find it here. He makes the same point (while Nelson misunderstands him and keeps raising an unrelated point about protein spaces). It is a stunning thought that evolutionary biologists have ignored this issue. Have they? Have population geneticists ever thought about this? Well, actually they have, starting nearly 90 years ago. And the calculations that they made do not offer support to Dr. Lönnig. Let me explain ... The standard model In population genetics, the standard model of genetic drift in finite populations is the Wright-Fisher model, introduced in 1930 and in 1932 by those two founders of that discipline. The other great founder, JBS Haldane, used a nearly equivalent model in 1927, though discussed less explicitly. In a Wright-Fisher model there are N parents, each of whom produces a very large but equal number of gametes. So large, that it is assumed that there are an infinite number of them, each parent contributing equally. These gametes then combine at random to form all possible genotypes, each in exactly its expected frequency. If natural selection occurs, it then shifts the genotype frequencies in precisely the expected way. Finally, density-dependent mortality occurs, leaving only N survivors, so that the population size is maintained. It impacts all genotypes equally, so that the N surviving adults are in effect a random sample from the genotypes that survived natural selection. This sampling of adult survivors causes the genetic drift. A numerical example For example, if we have a population of a haploid species with N = 10,000 individuals with two alleles A and a at equal frequencies, each of them will produce a vast number of gametes, equal numbers from the two genotypes. Among the gametes they will be in a 1:1 ratio. Now if the a genotype has viability 1% lower, after that mortality their numbers will stand in the ratio of 1 : 0.99. So after this mortality the frequency of the A genotype is 1/(1+0.99) = 0.50251256. These young individuals then die randomly in freak weather, are eaten randomly by predators, are run over by trucks, and so on. All the haphazard random mortality that Lönnig is worried about. Finally a random 10,000 of them are chosen to win the lottery and survive. As Lönnig says, there are all sorts of outcomes possible. Will the natural selection be effective? Lönnig obviously thinks not. But we can do the calculations. Will the frequency of the A genotype increase? Each of the 10,000 survivors is a randomly drawn offspring, and 0.50251256 of those are A. So it's just like tossing a coin 10,000 times, when the probability of Heads is 0.50251256. The outcome A simple binomial distribution shows that among the adult survivors the probability that the A genotype is more frequent than a is 0.681725. In all the random dying and random survival, the frequency of A rises more often than it falls. Now that is one generation. Further rounds of reproduction and survival, with the same fitnesses, will ultimately lead to the frequency of A either rising to 100% or falling to zero. What is the probability that, starting with equal frequencies, we end up with A winning out? For that we move from Fisher and Wright's models to calculations by PAP Moran (1958) and Motoo Kimura (1962). Let's leave out the details, and open the envelope. And the probability is ... 0.999999... and so on until there are 43 of those 9s. An explanation We can conclude that Dr. Lönnig is not familiar with theoretical population genetics. He is a retired plant breeder at the Max Planck Institute for Plant Breeding Research, who specialized in mutation effects in such plants as the "husk tomato" Physalis pubescens. I can understand why he might not have studied population genetics thoroughly. But why then is he holding forth on the topic? This is easily explained. He is also a creationist, associated with the German creationist organization Wort und Wissen. He formerly posted creationist material on his homepage at his Max Planck Institute. In a controversial move, the Institute forbade him to do this. If Dr. Lönnig wants to understand these matters more, I recommend to him that he visit a gambling casino -- in spite of the wild uncertainty of individual gambles, he might be surprised at how often he would lose his pocket money playing games that are mostly random, but slightly biased in favor of the house.

216 Comments

https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad · 4 May 2016

It's like probabilities are magic to them--not understandable, not predictable, yet somehow devastating to evolution.

Imagine, though, if human brains had evolved. Then some people might not really be reliable arbiters of issues like evolution and probability, unlike if God gave people certain knowledge, in at least the crucial matters. Fortunately, they know that they must be right, no matter how confused they may seem about basic issues.

Glen Davidson

https://me.yahoo.com/a/PkZsUe11rOBbyBPTMFoa6pUDJUQQjTxv#0c747 · 5 May 2016

I admit I am a total novice at this, but may I ask the following query:

A population has a certain environmental distribution and produces a number of offspring - each of which finds itself in a different environment - in that environment there is a probability p(E) they will survive.

The population has two allelles A and a. Overall there is a p(A) and p(a) that an individual will survive - lets say p(A) is greater.

But in some environments p(E|a) is higher than p(E|A); in others the opposite is the case - which shakes out to give the overall p(A) and p(a).

So whether the population prospers or declines depends upon two things - its distribution within the environment (if the population has all been washed to a hostile environment its prospects are dim) and the fitness of the genes to survive in that environment.

After a generation there is a new population - again distributed (most likely differently now) within the environment.

My untutored feeling is that the variation in environments will have a very significant impact on whether the species prospers or declines - I'm also fascinated by the assumption of a constant population in the population genetics model - it seems such an unrealistic constraint.

Gene fitness clearly affects survivability, but so too does environmental variation - which of these two factors has a greater effect on the survivability of the entire species seems very complex and not to me obvious.

The distribution of the species may be such that the environmental constraints have a far bigger impact on its survival than genetic ones.

I don't want to give any support to creationists - and I assume far more complex modelling has been done in the last 75 years building on the models of Haldane, Wright and Fisher, but I can't help feeling the OP misses a point

I'd love to understand how Modern evolutionary theory has built on the shoulders of these giants adding environmental issues into their models to help us try to understand when evolution is driven by Natural Selection, when it is driven by genetic drift and when it is driven by environmental factors - remember those poor dinosaurs and the radiations after their removal from the environment.

A model with a static population in a constant environment where population distributions can depend upon tiny variations in genes which even though tiny give statistical guarantees of gene success are all very well, but effective population sizes and environments show these assumptions don't hold very well for the real world - have we built better assumptions into our models since these early models - I'd love to know.

eric · 5 May 2016

https://me.yahoo.com/a/PkZsUe11rOBbyBPTMFoa6pUDJUQQjTxv#0c747 said: The population has two allelles A and a. Overall there is a p(A) and p(a) that an individual will survive - lets say p(A) is greater. But in some environments p(E|a) is higher than p(E|A); in others the opposite is the case - which shakes out to give the overall p(A) and p(a).... ...My untutored feeling is that the variation in environments will have a very significant impact on whether the species prospers or declines... ...The distribution of the species may be such that the environmental constraints have a far bigger impact on its survival than genetic ones.
Sure. I am also a layperson but I think in layperson terms it works like this: Option 1: p(a) vs. p(A) relatively small compared to p(a|E) vs. p(A|E) [note I switched your order: I think you're concerned about 'probability A dominates given E', not 'probability E dominates given a'], large population. If animals regularly flow freely between the E where (a) dominates and the E where (A) dominates, I don't know what would happen. If animals cannot flow freely between those two environments, then in this case we would expect speciation or variation driven by natural selection to occur. I.e. the population separates into semi-isolated groups of (a) in the environment where (a) is favored and (A) in the other. Option 2: p(a) vs. p(A) relatively large compared to p(a|E) vs. p(A|E), large population. Natural selection dominates. Option 3: p(a) vs. p(A) about equal to p(a|E) vs. p(A|E), OR small population. Genetic drift dominates. Or to make a simple illustrative case, yes you're right that when the local volcano goes off, a slight fitness advantage to associated with cold weather tolerance isn't necessarily going to propagate through the population the way it might otherwise.

DS · 5 May 2016

I guess that no creationist is capable of understanding the concept of "random". They seem to mangle it every time. You would think that someone who studied mutations for a living would at least have a clue. Oh well, yet another creationist spouting off about things he knows nothing about shouldn't do too much harm. After all, he con only convince the willfully ignorant.

Of course, many potentially beneficial mutations are lost due to drift. Of course natural selection still operates. Of course evolution still works. Of course these issues have already =been dealt with mathematically. Of course creationists are completely ignorant of this history. CUltivating and propagating ignorance is apparently their job description. SInce the guy apparently didn't use any math to support his preconceptions, it is obvious that he was just using his incredulity as evidence, same as always. Next he'll be saying that the human eye couldn't evolve!

Joe Felsenstein · 5 May 2016

(I have added subheadings to my post, to break up the big block of text).

Masked Panda c747: I am not sure what you are asking. Your notation is unusual. I normally would use p(A) and p(a) as the frequencies of the two genotypes, not their fitnesses, for example. And my objective here is to analyze Lönnig's assertions that in simple cases genetic drift will eliminate the effect of natural selection, not to ask whether the population survives. (In these models it does survive because there is a large reproductive excess, and a strong density-dependent population size regulation).

eric: Yes, you can analyze cases where environments change, and cases where the population is distributed over environments. Lots of work on this has been done. In fact I wrote a review article in 1976 in Annual Review of Genetics entitles "The theoretical population genetics of variable selection and migration" with 152 references. That was 40 years ago and there have been many more papers on those topics since.

The present simple model, with one population and the same fitnesses every generation is sufficient to show that Lönnig doesn't know the theory relevant to predicting outcomes in even simple cases.

Michael Fugate · 5 May 2016

Joe Felsenstein said: The present simple model, with one population and the same fitnesses every generation is sufficient to show that Lönnig doesn't know the theory relevant to predicting outcomes in even simple cases.
And that this result was known close to 100 years ago - once again creationists who neither know science nor history.

Joe Felsenstein · 5 May 2016

Michael Fugate said: ... And that this result was known close to 100 years ago - once again creationists who neither know science nor history.
It's worse than that -- Lönnig is a plant geneticist formerly at a major European research institute where they very much know what they are doing. He should have at least known what he didn't know. I guess once you start saying silly things about the age of the earth, all the restraints are off.

Daniel · 5 May 2016

It's almost like they don't understand how does a casino make money when they only have a 2% house advantage on their games

Robert Byers · 5 May 2016

If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive.
i think he's saying there is no reason these few aree more fit then all those who didn't survive. They couldn't be recognized by nature as more fit. Its a common sense thing against math/probability ideas.
he is a sharp scientist and knows in practical ways about mutations.
Thats where he is coming from. Indeed not the blackboard but real biology. a wee bit of instinct too.

phhht · 5 May 2016

Robert Byers said: If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive. i think he's saying there is no reason these few aree more fit then all those who didn't survive. They couldn't be recognized by nature as more fit. Its a common sense thing against math/probability ideas. he is a sharp scientist and knows in practical ways about mutations. Thats where he is coming from. Indeed not the blackboard but real biology. a wee bit of instinct too.
Gods you're ignorant, Byers.

phhht · 5 May 2016

phhht said: Gods you're ignorant, Byers.

The phrase "survival of the fittest" is not generally used by modern biologists as the term does not accurately describe the mechanism of natural selection as biologists conceive it. Natural selection is differential reproduction (not just survival) and the object of scientific study is usually differential reproduction resulting from traits that have a genetic basis under the circumstances in which the organism finds itself, which is called fitness, but in a technical sense which is quite different from the common meaning of the word. -- Wikipedia

Henry J · 5 May 2016

Yeah, that word "fittest" is a huge oversimplification of what it means in this context.

stevaroni · 5 May 2016

Robert Byers said: If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive.
An yet, I notice that somehow you fail to address the actual math, which rather convincingly demonstrates that even a tiny advantage eventually prevails when applied to large numbers and many trials. Math is a pesky, pesky thing, Robert, because it seems to demonstrate that you are wrong, no matter how much it "makes sense" to you. This isn't even hard math, Robert. Look in the corner of the computer you're typing on, open the "All programs" then "accessories" menus. There will be a program in there called "calculator". It is a tool for manipulating actual numbers, and it both functions you need - division and raising things to a power - to allow you to work out an actual example, like Joe Felsenstein does at the head of the page. Take an arbitrarily small fitness difference in a reasonably large population. Take that ratio and 'breed' it through a series of generational steps and when you get one that works the way things "make sense" to you, rather than the way it seems to work when we do the math, show us your numbers. This should not be hard, Robert. This is not arcane math in any sense of the word. Some local kid who got decent grades in algebra should be able to help you work your way through it, especially given an example to follow. Give us an example where Wolf-Ekkehard Lönnig is right and we're wrong, Robert. It should be trivial, you have the formula in front of you, you just have to find the point at which it collapses in the real world.

Rolf · 6 May 2016

phhht said:
Robert Byers said: If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive. i think he's saying there is no reason these few aree more fit then all those who didn't survive. They couldn't be recognized by nature as more fit. Its a common sense thing against math/probability ideas. he is a sharp scientist and knows in practical ways about mutations. Thats where he is coming from. Indeed not the blackboard but real biology. a wee bit of instinct too.
Gods you're ignorant, Byers.
Poor Robert,
Math is just a language of reality. Its a waste of time to know it.
Made immortal by being included in the AtBC sig of JohnW.

quentin-long · 6 May 2016

stevaroni said:
Robert Byers said: If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive.
An yet, I notice that somehow you fail to address the actual math, which rather convincingly demonstrates that even a tiny advantage eventually prevails when applied to large numbers and many trials. Math is a pesky, pesky thing, Robert, because it seems to demonstrate that you are wrong, no matter how much it "makes sense" to you. This isn't even hard math, Robert. Look in the corner of the computer you're typing on, open the "All programs" then "accessories" menus. There will be a program in there called "calculator".
You're assuming that Byers is using a Windows machine. What you wrote is probably accurate for Windows (but even then I'd be cautious, in case Byers is using some funky-ass Windows version that's changed things around), but it's not at all accurate for Macintosh; as for Linux, well, which Linux distro?

Anton Mates · 6 May 2016

If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive.
The survivors don't have to be the fittest, just fitter on average than the ones who didn't make it.
or rather all the rest didn’t survive and so why would these FIT ones survive
...because it's a competition? There's enough resources for somebody to survive and reproduce, but not enough for everybody to do that. Winners and losers, and the fitter individuals are more likely to win.

gnome de net · 6 May 2016

Anton Mates said: Winners and losers, and the fitter individuals are more likely to win.
Or just the lucky ones. I often wonder about the insects that splatter on my windshield, if one of them might have the perfect genome that would enable it to survive every predator or natural hazard that it might encounter, resulting eventually in creatures that would dominate the world a la the dinosaurs.

TomS · 6 May 2016

gnome de net said:
Anton Mates said: Winners and losers, and the fitter individuals are more likely to win.
Or just the lucky ones. I often wonder about the insects that splatter on my windshield, if one of them might have the perfect genome that would enable it to survive every predator or natural hazard that it might encounter, resulting eventually in creatures that would dominate the world a la the dinosaurs.
Pelagibacter ubique

Joe Felsenstein · 6 May 2016

gnome de net said:
Anton Mates said: Winners and losers, and the fitter individuals are more likely to win.
Or just the lucky ones. I often wonder about the insects that splatter on my windshield, if one of them might have the perfect genome that would enable it to survive every predator or natural hazard that it might encounter, resulting eventually in creatures that would dominate the world a la the dinosaurs.
Oh, that's the reason! I had been waiting and wondering, puzzled why no successor to the dinosaurs had arisen. And now I know ... it's you and your damn windshield!

https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad · 6 May 2016

gnome de net said:
Anton Mates said: Winners and losers, and the fitter individuals are more likely to win.
Or just the lucky ones. I often wonder about the insects that splatter on my windshield, if one of them might have the perfect genome that would enable it to survive every predator or natural hazard that it might encounter, resulting eventually in creatures that would dominate the world a la the dinosaurs.
That's why I have a windshield. Glen Davidson

Henry J · 6 May 2016

I thought birds were the successors to dinosaurs.

https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad · 6 May 2016

Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson

Just Bob · 6 May 2016

https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad said:
Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson
So 70,000,000 years ago, dinosaurs were eating small mammals. Now, small mammals are eating the dinosaurs!

John Harshman · 6 May 2016

Just Bob said:
https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad said:
Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson
So 70,000,000 years ago, dinosaurs were eating small mammals. Now, small mammals are eating the dinosaurs!
Dinosaurs are still eating small mammals too.

https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad · 6 May 2016

John Harshman said:
Just Bob said:
https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad said:
Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson
So 70,000,000 years ago, dinosaurs were eating small mammals. Now, small mammals are eating the dinosaurs!
Dinosaurs are still eating small mammals too.
Hawks can take all of the yappy little dogs. Glen Davidson

Pierce R. Butler · 6 May 2016

quentin-long said:
... it's not at all accurate for Macintosh...
Apple includes a basic calculator among the "widgets" provided with each version of MacOSX, and has for decades.

stevaroni · 6 May 2016

Pierce R. Butler said:
quentin-long said:
... it's not at all accurate for Macintosh...
Apple includes a basic calculator among the "widgets" provided with each version of MacOSX, and has for decades.
Actually I use all three platforms all day long, I just went with the odds and figured Robert is Windows based. One of the -ixes is too much of a leap for someone who actively denies tech as much as Robert, and I suspect that Mac is too socialist. Oddly, though I grump a lot about the Windows platform, I really like their calculator, if you pull up the "programmer" view it has a bunch of very usable binary and hexadecimal features. Since I'm in hex and binary all day long, I've really come to appreciate it. The stock Mac version, like everything Mac, has a distinct "don't you worry your pretty little head" aspect about it if you try to do anything serious.

Robert Byers · 7 May 2016

Anton Mates said:
If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive.
The survivors don't have to be the fittest, just fitter on average than the ones who didn't make it.
or rather all the rest didn’t survive and so why would these FIT ones survive
...because it's a competition? There's enough resources for somebody to survive and reproduce, but not enough for everybody to do that. Winners and losers, and the fitter individuals are more likely to win.
AHA, AHA, thats the point here. The fitter,critics are saying, were not fitter. in fact as following posyer GNOME said the lucky are as likely. Its being said by a practical scientist in real study of mutations in plants that its so, so, so, few that survive its not accurate to say the fittest survive anymore then anyone else. The resources/competition is not rewarding the fittest. just a roll of the dice. So undercutting the concept of evolutionary progress/new populations . This mans instincts do work in the math. You all are saying a advantage in a, just, few will make a new different population. He is saying this is against probability. tHE ADVANTAGE is not being selected anymore then lucky/roll of the dice. he is saying mutation is not being selected if the odds matter here.

Robert Byers · 7 May 2016

stevaroni said:
Robert Byers said: If only a few out of millions/billions survive to reproduce it does not make sense that in such a small number the fittest would survive. its too small or rather all the rest didn't survive and so why would these FIT ones survive.
An yet, I notice that somehow you fail to address the actual math, which rather convincingly demonstrates that even a tiny advantage eventually prevails when applied to large numbers and many trials. Math is a pesky, pesky thing, Robert, because it seems to demonstrate that you are wrong, no matter how much it "makes sense" to you. This isn't even hard math, Robert. Look in the corner of the computer you're typing on, open the "All programs" then "accessories" menus. There will be a program in there called "calculator". It is a tool for manipulating actual numbers, and it both functions you need - division and raising things to a power - to allow you to work out an actual example, like Joe Felsenstein does at the head of the page. Take an arbitrarily small fitness difference in a reasonably large population. Take that ratio and 'breed' it through a series of generational steps and when you get one that works the way things "make sense" to you, rather than the way it seems to work when we do the math, show us your numbers. This should not be hard, Robert. This is not arcane math in any sense of the word. Some local kid who got decent grades in algebra should be able to help you work your way through it, especially given an example to follow. Give us an example where Wolf-Ekkehard Lönnig is right and we're wrong, Robert. It should be trivial, you have the formula in front of you, you just have to find the point at which it collapses in the real world.
It is about math. You are taking a small difference in fitness and doing your math. Yet this scientist, down and dirty practical in plant mutations, is saying the advantage is irrelevant in who survives in a hugh population. Its so small there is NO advantage. Its as if its just a roll of the dice. He is working from a instinct on odds. Odds on advantage being selected. Your side is saying the advantaged/difference traits is , by probability, likely to be picked. Selected on. He is saying the smallness of numbers of those picked makes the advantage/difference irrelevant. The vast magority of those with a advantage are not picked. Its not a advantage. In fact your side must say its a tiny probability of which ADVANTAGED ones would picked amongst the group of advantaged. its more probable lucky ones will be selected to survive then advantaged ones DUE to the hugh numbers. thats this scientist hunch. The math doesn't work.

Rolf · 7 May 2016

Seems Robert is lost way out in the woods here. It doesn't matter which of the advantaged ones survive. It follows from the advantage of being advantaged that they will have a higher reproductive success rate. That means that percentwise they will producing more desendants that the not-so-advantaged ones.

A process like that means a percentwise higher number of advantaged ones survive and produce offspring in the population. In the long run the less advantaged varity faces the risk of disappearance, swamped by the advantaged ones.

It goes without saying that there always will be an element of "luck" and chance in reproduction within a population but that doesn't eliminate the effect of differential reproductive success due to genetic differences.

There is no picking going on, there is a process of survival and propagation going on.

harold · 7 May 2016

I suspect that Mac is too socialist.
I get that you're talking about the distorted perception of creationists here, not reality, but I just have to object to the description of a company that uses low wage labor in China to manufacture generic electronic goods, and then uses clever marketing to sell said goods, mainly in rich countries, at a premium over the price of other pretty much identical brands of Chinese-manufactured generic electronic goods, as "socialist".
John Harshman said:
Just Bob said:
https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad said:
Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson
So 70,000,000 years ago, dinosaurs were eating small mammals. Now, small mammals are eating the dinosaurs!
Dinosaurs are still eating small mammals too.
Not that I have anything against small mammals in the least, but for some reason this made my day. As for the actual topic, I'll point out a few simple things - 1) The concept is intuitively obvious. There's a huge amount of random stuff happening. At the individual level, in many environments, luck may dominate. But when we take all individuals and environments into account, small advantages have strong effects. https://en.wikipedia.org/wiki/Law_of_large_numbers 2) Although the Earth has finite resources and competition, you don't even need that for selection. I've used this example before. A green blob and a blue blob wash up on the shores of a magical island with infinite resources and space. Green and blue blobs never harm one another, nor does anything else in that environment harm blobs. They reproduce by mitosis. The only difference is, green blobs reproduce 1% more frequently. Come back in 100 generations and you will see massive selection in favor of green blobs. A substantial majority of the blobs will be green. (1.01)^100 >1^100 Wait a lot longer and although blue blobs are happily reproducing and never go extinct, they will be very, very, very hard to find among all the green blobs. In real life we also have predation, other forms of competition, a changing environment that can throw those highly adapted to the current environment for a loop, etc. So the math is more complicated. The principle is simple.

harold · 7 May 2016

I suspect that Mac is too socialist.
I get that you're talking about the distorted perception of creationists here, not reality, but I just have to object to the description of a company that uses low wage labor in China to manufacture generic electronic goods, and then uses clever marketing to sell said goods, mainly in rich countries, at a premium over the price of other pretty much identical brands of Chinese-manufactured generic electronic goods, as "socialist".
John Harshman said:
Just Bob said:
https://me.yahoo.com/a/JxVN0eQFqtmgoY7wC1cZM44ET_iAanxHQmLgYgX_Zhn8#57cad said:
Henry J said: I thought birds were the successors to dinosaurs.
Cat food. Glen Davidson
So 70,000,000 years ago, dinosaurs were eating small mammals. Now, small mammals are eating the dinosaurs!
Dinosaurs are still eating small mammals too.
Not that I have anything against small mammals in the least, but for some reason this made my day. As for the actual topic, I'll point out a few simple things - 1) The concept is intuitively obvious. There's a huge amount of random stuff happening. At the individual level, in many environments, luck may dominate. But when we take all individuals and environments into account, small advantages have strong effects. https://en.wikipedia.org/wiki/Law_of_large_numbers 2) Although the Earth has finite resources and competition, you don't even need that for selection. I've used this example before. A green blob and a blue blob wash up on the shores of a magical island with infinite resources and space. Green and blue blobs never harm one another, nor does anything else in that environment harm blobs. They reproduce by mitosis. The only difference is, green blobs reproduce 1% more frequently. Come back in 100 generations and you will see massive selection in favor of green blobs. A substantial majority of the blobs will be green. (1.01)^100 >1^100 Wait a lot longer and although blue blobs are happily reproducing and never go extinct, they will be very, very, very hard to find among all the green blobs. In real life we also have predation, other forms of competition, a changing environment that can throw those highly adapted to the current environment for a loop, etc. So the math is more complicated. The principle is simple.

Ron Okimoto · 7 May 2016

There is one simple observation that if any IDiot can read this should be understandable to any such IDiot.

Why didn't this guy ever publish and become as famous as Fisher and Wright?

He would really have something if he could demonstrate that he submitted such papers, but they were always rejected. It would be even better if he posted the reviewers comments and could demonstrate that they were incorrect or off topic.

It is really unbelievable to me that anyone could even have second thoughts on the situation. We have genetic theory put forward over 80 years ago, and this guy thinks that something is wrong with it, but never tried to demonstrate it.

Now, when his only audience are the cretins that are still IDiots when the bait and switch has been going down for over 14 years and not a single IDiot has ever gotten the promised ID science when they have needed it, he makes his claims. Who would believe the guy?

Really, the ISCID died 8 years ago, and they stopped publishing their "science" journal in 2005. That was supposed to be the IDiot science organization, and my bet is that this guy was a member, and he never presented this stupidity to his IDiot peers, or even they laughed him down.

Whenever the guys that sold the ID scam need to put forward the science of intelligent design all any IDiot ever gets is a switch scam that doesn't even mention that ID ever existed. Every single time with not a single exception for nearly a decade and a half. There never was any ID science worth discussing, so what is the draw, and why would anyone take anything like this seriously? What possible legitimate excuse could anyone have at this point in the history of the creationist ID scam?

harold · 7 May 2016

Really, the ISCID died 8 years ago, and they stopped publishing their “science” journal in 2005. That was supposed to be the IDiot science organization
ID was and I suppose still is the animated corpse of Creation Science. ID per se became largely irrelevant to society with Dover. The latest significant creationist thing has been COPE. They didn't even get to court. But notably, they didn't at all use the ID methodology (which is to make some false science-y sounding claim that evolution can't explain something, then say if it wasn't evolution it must have been "the designer", and then try to sneak out the message to your supporters that "the designer" is the Fox News version of God, while claiming you aren't being religious so this should be taught as science). COPE resorted to a different post-Edwards strategy, the nihilistic, post-modern claim that "science is religion", so therefore, you have to teach exactly their religion as science (but oddly no-one else's), or not teach science at all. COPE is using an almost anti-ID strategy. Instead of trying to disguise the sectarian nature of creationism, they're going for the "oh, yeah, while science is religious too" strategy. However, the current that keeps the animated corpse lurching around is money, and until the money stops, there will be a DI, and presumably new posts at ENV and UD. If the DI has or gets some kind of perpetual trust, they could literally sit there forever. However, there is weak evidence - particularly the odd departure of Casey Luskin - that their failure to actually make the slightest dent in "materialism" may be annoying the contributors.

quentin-long · 7 May 2016

Pierce R. Butler said:
quentin-long said:
... it's not at all accurate for Macintosh...
Apple includes a basic calculator among the "widgets" provided with each version of MacOSX, and has for decades.
Of course—but stevaroni said "Look in the corner of the computer you’re typing on, open the 'All programs' then 'accessories' menus. There will be a program in there called 'calculator'." The "look in the corner" instruction is probably a reference to Windows' Start Menu, which doesn't exist on OS X. Thus, if Byers is using a non-Windows machine, stevaroni's instructions are unlikely to apply to it.

Pierce R. Butler · 7 May 2016

I activate the "widgets" (a term Apple stole from small developers who couldn't fight back) by moving the pointer to a (user-selectable) corner, so stevaroni's directions - though including extra steps unnecessary on a Mac - could apply in a broad sense.

As stevaroni points out, Apple's calculator is pretty light-duty - but then, so is the number-crunching required in the original post here.

harold · 7 May 2016

quentin-long said:
Pierce R. Butler said:
quentin-long said:
... it's not at all accurate for Macintosh...
Apple includes a basic calculator among the "widgets" provided with each version of MacOSX, and has for decades.
Of course—but stevaroni said "Look in the corner of the computer you’re typing on, open the 'All programs' then 'accessories' menus. There will be a program in there called 'calculator'." The "look in the corner" instruction is probably a reference to Windows' Start Menu, which doesn't exist on OS X. Thus, if Byers is using a non-Windows machine, stevaroni's instructions are unlikely to apply to it.
For those who are using Windows, it's always handy to pin the calculator to the start menu, or in Windows 10, that strip at the bottom. Also, the default "regular" setting is useless but there are many other settings. I find "scientific" to be the best. Just set it on "scientific" and pin it where it's easily available and it will be right there. No need to dig it out of accessories every time.

robert van bakel · 7 May 2016

I don't think I've been banned, although I haven't posted in a while. Please don't tell me we're taking a leaf out of UD's posting manifesto with a long moderation que.

robert van bakel · 7 May 2016

Apolgies for the unfounded accusation. I posted on the previous article and all is well; my mistake!

Robert Byers · 7 May 2016

Rolf said: Seems Robert is lost way out in the woods here. It doesn't matter which of the advantaged ones survive. It follows from the advantage of being advantaged that they will have a higher reproductive success rate. That means that percentwise they will producing more desendants that the not-so-advantaged ones. A process like that means a percentwise higher number of advantaged ones survive and produce offspring in the population. In the long run the less advantaged varity faces the risk of disappearance, swamped by the advantaged ones. It goes without saying that there always will be an element of "luck" and chance in reproduction within a population but that doesn't eliminate the effect of differential reproductive success due to genetic differences. There is no picking going on, there is a process of survival and propagation going on.
AHA. Thats the criticism. This scientist isw saying the advantaged ones are so few and far between relative to the whole population that its not the advantaged surviving. This is , he says I think, the flaw in the reasoning. Those who survive is unrelated to advantage. Its just luck or no different then luck. His point is that too few survive to justify the claim they survive/reproduce because of a advantage. SO then biological change is not coming from selection on advantaged traits of individuals. The thread was made to say HE got his math wrong. Just a tweek of advantage would bring evolution. This scientist is not saying there is not advantage but its not possible it effects anything due to the math of the population. He is saying on a curve the advantages eventually are meaningless in great numbers. Then he says it is great numbers that we are dealing with. its his instinct about probability.

Tom English · 7 May 2016

harold said:
Really, the ISCID died 8 years ago, and they stopped publishing their “science” journal in 2005. That was supposed to be the IDiot science organization
ID was and I suppose still is the animated corpse of Creation Science. ID per se became largely irrelevant to society with Dover.
You're evidently not in touch with the evangelical grassroots. I recommend watching Lessons 5(1) and 5(2) (an hour each) of Focus on the Family's The Truth Project. That's a lot of time to ask you to spend. But I'm saying that you really can't appreciate the impact without experiencing it. Folks like my brother, the Deacon John Mark (not an idiot), end up convinced that the mainstream evolutionary theory is bad science, not merely that ID should have a place at the table. They genuinely believe that the truth is being suppressed in the public schools, and that the anti-science bills introduced each year in the legislature are meant to rectify that.
The latest significant creationist thing has been COPE. They didn't even get to court. But notably, they didn't at all use the ID methodology (which is to make some false science-y sounding claim that evolution can't explain something, then say if it wasn't evolution it must have been "the designer", and then try to sneak out the message to your supporters that "the designer" is the Fox News version of God, while claiming you aren't being religious so this should be taught as science). COPE resorted to a different post-Edwards strategy, the nihilistic, post-modern claim that "science is religion", so therefore, you have to teach exactly their religion as science (but oddly no-one else's), or not teach science at all. COPE is using an almost anti-ID strategy. Instead of trying to disguise the sectarian nature of creationism, they're going for the "oh, yeah, while science is religious too" strategy.
Thanks for reminding me of this. There actually was a decision against Citizens for Objective Public Education (COPE) by a federal district court, back in 2013, and I was unaware that an appeals court recently upheld that decision. Perhaps you mean that the decision was that COPE does not have standing. Footnote 6 from the appeals court is quite interesting:
Although we do not reach the merits, we note that COPE asks the court to implement a requirement identical to the one imposed by the statute in Edwards. COPE frames the materialism of evolutionary theory as a religious belief competing with COPE’s own teleological religion, and demands that if evolution is taught, teleological origins theories must also be taught. The Edwards Court expressly held such a requirement unconstitutional.
This "teleological" stuff originates in ID, as you know. So I say again that the DI is having an impact in nonobvious ways.
However, the current that keeps the animated corpse lurching around is money, and until the money stops, there will be a DI, and presumably new posts at ENV and UD.
I'll breathe easier when an ID-unfriendly replacement for Scalia is confirmed. And then we'll need a young-and-healthy substitute for Ruth Bader Ginsburg.
If the DI has or gets some kind of perpetual trust, they could literally sit there forever. However, there is weak evidence - particularly the odd departure of Casey Luskin - that their failure to actually make the slightest dent in "materialism" may be annoying the contributors.
You can see here that the DI spent 22 percent more than in brought in, back in 2013. Its income began trending downward in 2010. It's hard to say what was going on, because a large transportation-related project (funded by Microsoft) came to an end.

Mike Elzinga · 8 May 2016

Tom English said: I recommend watching Lessons 5(1) and 5(2) (an hour each) of Focus on the Family's The Truth Project.
It's a pretty good, as well as pretty disgusting, example of how the captive audiences of these sectarian orators are never given a chance to see into the real processes of science. They never use wonder and the questions a bright child will ask to take a questioner to the next level that leads to an understanding of how science is actually done. Scientists are demonized over and over and over by asserting that they refuse to accept a specific sectarian deity when they choose to move forward with research and not give up by saying it is all too complex, therefore a deity did it. Scientists are far more forward-looking than sectarians can even imaging. Nobody in the ID/creationist community has any hint of the thoughts that go through the mind of a real, working researcher who comes up with more ideas for further research. No ID/creationist has any clue of the background understanding of the real working scientist because not one ID/creationist scientist wannabe has any such deep background understanding; they get science concepts wrong at even the high school level despite the letters after their names that they always waggle in front of their audiences. Did anyone notice in those videos that all real working scientists were referred to by their last names without any mention of their degees; but every ID/creationist like Behe, Meyer, and Kenyon were referred to as Doctor Michael Behe, and Doctor Stephen Meyer, and Doctor Dean Kenyon? This tactic is a back-handed, sneering rejection of the legitimacy of real working scientists. Scientists are bad! This kind of crap goes on routinely in sectarian circles where science is mocked and demonized because it doesn't conclude a specified deity did everything we see. But none of these sectarians know how much more than they do what real, woking scientists actually see and understand . There is no communicating with these sectarians. They think scientists are bad and creationists are good; and they will slip into their oratory any and all emotional dog whistles to get that revulsion of scientists implanted into the minds of their audiences.

Rolf · 8 May 2016

What the IDiots are saying and maybe even believe is that the universe is a barren, sterile "creation" that needs a deity to operate in the same way that a car needs someone with a foot on the accelerator.

They are a fifth column at the heels of science.

TomS · 8 May 2016

Rolf said: What the IDiots are saying and maybe even believe is that the universe is a barren, sterile "creation" that needs a deity to operate in the same way that a car needs someone with a foot on the accelerator. They are a fifth column at the heels of science.
But, they will also argue that the universe is fine tuned for living things. Do they have a consistent view of the way that the universe runs?

Ron Okimoto · 8 May 2016

Tom English said:
harold said:
Really, the ISCID died 8 years ago, and they stopped publishing their “science” journal in 2005. That was supposed to be the IDiot science organization
ID was and I suppose still is the animated corpse of Creation Science. ID per se became largely irrelevant to society with Dover.
You're evidently not in touch with the evangelical grassroots. I recommend watching Lessons 5(1) and 5(2) (an hour each) of Focus on the Family's The Truth Project. That's a lot of time to ask you to spend. But I'm saying that you really can't appreciate the impact without experiencing it. Folks like my brother, the Deacon John Mark (not an idiot), end up convinced that the mainstream evolutionary theory is bad science, not merely that ID should have a place at the table. They genuinely believe that the truth is being suppressed in the public schools, and that the anti-science bills introduced each year in the legislature are meant to rectify that.
It doesn't matter how the clueless still use IDiocy. The fact is that the science side of the issue hasn't had to do much of anything for over 14 years to keep IDiocy out of the public schools. The ID perps at the Discovery Institute are the ones blocking that avenue. Everyone with enough brain power to understand what happens whenever any creationist rubes want to teach the wonderful ID science in the public schools knows that it is the guys that sold them the ID scam that stop the IDiots from implementing. Rational people have to remain diligent to keep the creationist switch scam from obfuscating the education issue, but IDiocy is dead, and the guys that sold the ID scam are the ones that constantly kill it. The Discovery Institute tried to run the bait and switch on the Dover creationist rubes, but they had already obtained their "free" legal service and decided not to bend over and take the switch scam from the ID perps. Since Dover everyone with a clue understands why the bait and switch has to keep going down. The ID perps may keep selling ID, but that isn't what the rubes get when they need it. The only reason that ID ever had a day in court was because the ID perps ran into a bunch of rubes too clueless to put 2 and 2 together when they were offered the switch scam. Most creationist rubes in that situation either drop the issue or bend over for the switch scam. That is the way it has been since Ohio in 2002. The switch scam is basically just the old scientific creationist obfuscation scam and it doesn't even mention that intelligent design ever existed. The same guys that sold the rubes the ID scam are selling the rubes the switch scam instead. No one can deny that. Why are there any IDiots left with that constantly going down? We aren't talking about rocket science. What happens whenever any creationist rube legislator or school board wants to teach the science of intelligent design? Who is first in line to stop them? What do the rubes get instead from the guys that sold them the ID scam? They only get something that doesn't mention that ID ever existed. How do IDiots explain reality to themselves?

harold · 8 May 2016

You’re evidently not in touch with the evangelical grassroots. I recommend watching Lessons 5(1) and 5(2) (an hour each) of Focus on the Family’s The Truth Project. That’s a lot of time to ask you to spend. But I’m saying that you really can’t appreciate the impact without experiencing it. Folks like my brother, the Deacon John Mark (not an idiot), end up convinced that the mainstream evolutionary theory is bad science, not merely that ID should have a place at the table. They genuinely believe that the truth is being suppressed in the public schools, and that the anti-science bills introduced each year in the legislature are meant to rectify that.
To clarify, I strongly agree that evolution denial and latter day religious right science denial in general have and will continue indefinitely to have a strong negative influence on individuals. Also, once a meme has entered the creationist lexicon, it never exits, so slogans that originated in the ID glory years of the late 1990's through 2005 will reappear. Having said that, why I meant, and I stand by it, is that ID itself specifically, as most strongly characterized in the works of Dembski, Behe, and a few others, as touted in the mainstream media during the first George W. Bush term, as the specific product of the DI, has no unique relevance, and is merely a historical part of the overall evolution denial movement. It did not succeed in tricking anyone. Dembski has gone from faculty position at Baylor to not even employed by a Bible college, and now claims he's going to turn his hand to creating a Johnny-come-lately Bitcoin imitation. Behe is isolated and hasn't been in the news or sold many books for years. Casey Luskin was apparently fired or laid off and has a new web site documenting his soul-searching meanderings around the world, replete with sneering comments. COPE may have some language that represents a subtle nod to ID, but they in no way, shape, or form used overt reference to ID as their strategy. Yes, by the way, I was referring to the upholding, on appeal, of the finding that they lack standing. ID was a specific thing. It was an effort to trick non-creationists into not legally challenging sectarian creationism in public school science classes. The idea was that if instead of overtly stating creationist ideas, you made some kind of pompous argument that evolution was impossible, either in general or in the case of the "bacterial flagellum" or "Cambrian explosion", and then used a bunch of coded language to say "It must have been the post-modern American religious right God", no-one would be able to stop you. It failed at Dover. Virtually no-one supports ID except the exact same people who would support teaching that the KJV Noah's Ark passages are literally true, and anyone who denies that will go to Hell, in public school science class, as science. ID is thus irrelevant as an independent factor, and those who specialized in it are feeling the consequence of that. Evolution denial per se is not, of course; it is part of a general authoritarian religio-political ideology which continues to cause harm. In the case of evolution denial, mainly in indirect ways. Please also see comments by Ron Okimoto above, with which I strongly agree

TomS · 8 May 2016

harold said: Virtually no-one supports ID except the exact same people who would support teaching that the KJV Noah's Ark passages are literally true, and anyone who denies that will go to Hell, in public school science class, as science. ID is thus irrelevant as an independent factor, and those who specialized in it are feeling the consequence of that. Evolution denial per se is not, of course; it is part of a general authoritarian religio-political ideology which continues to cause harm. In the case of evolution denial, mainly in indirect ways.
There are difficulties in describing evolution denial. For example, "the KJV Noah's Ark passages are literally true". While there are many people who will say that they believe that, there are few who actually believe that. On the one hand, there are conflicts within the narrative. On the other hand, many people cannot resist the urge to expand upon the narrative, with things like "baraminology". And there are those who want to make a distance between ID and YEC: The advocates of ID who complain when the wrong people are not careful enough when saying "ID is creationism"; The YECs who complain about ID not being explicit enough about the identity of the designer(s). The problem arises from the tendency to treat evolution-denial as if it were a difference of opinion: an alternative account for the diversity of life, a mistake in understanding science, or even a theological dispute. But what is really going on is a social and political movement, being waged with advertising (and often with negative advertising) slogans.

harold · 8 May 2016

The problem arises from the tendency to treat evolution-denial as if it were a difference of opinion: an alternative account for the diversity of life, a mistake in understanding science, or even a theological dispute. But what is really going on is a social and political movement, being waged with advertising (and often with negative advertising) slogans.
Yes, of course this is true. I am trying to make a mildly subtle point here, which I think Ron Okimoto is also trying to make. There is a DI. There is "ID". There are books written by William Dembski and Michael Behe. "ID" has features that differentiate it from Ark Encounter. The point of "ID", within the universe of evolution denial, was to get evolution denial into public school science classrooms in a way that could not be challenged in court. That failed. The DI has certainly not expanded since Dover and shows abundant signs of slow contraction. Dembski is not the chairman of a right wing Bible college. Behe is not being feted on national television as a "bold maverick". Evolution denial is still going strong and old memes from the glory days of ID are being repeated but ID is yesterday's news. This is pretty obvious.

harold · 8 May 2016

TomS said:
Rolf said: What the IDiots are saying and maybe even believe is that the universe is a barren, sterile "creation" that needs a deity to operate in the same way that a car needs someone with a foot on the accelerator. They are a fifth column at the heels of science.
But, they will also argue that the universe is fine tuned for living things. Do they have a consistent view of the way that the universe runs?
I know we both agree that there are only two consistencies in the entire evolution denial world. 1) Always contradict evolution, no matter how much you may have to contradict yourself. 2) However inconsistent you may be in every other way, never say anything that directly contradicts the idea that the Earth is 6000 years old, and the Garden of Eden and Noah's Ark stories are "literally true". (And in fact we know that Dembski accidentally almost did this once and that caused him major difficulties, and all the groveling back-peddling in the world didn't help much. "OEC" Hugh Ross is an isolated, elderly Canadian crackpot who has never made a living as a professional creationist, but rather, is a tenured professor and hobby creationist.) The reason for "2)" is obvious. Somebody has to pay the bills, and even if some ID/creationists secretly believe that the Earth is older or something, if they say that they'll alienate a huge number of customers. So there's always either a YEC claim, or a plausible deniability "may be" clause somewhere.

Scott F · 8 May 2016

stevaroni said: Oddly, though I grump a lot about the Windows platform, I really like their calculator, if you pull up the "programmer" view it has a bunch of very usable binary and hexadecimal features. Since I'm in hex and binary all day long, I've really come to appreciate it. The stock Mac version, like everything Mac, has a distinct "don't you worry your pretty little head" aspect about it if you try to do anything serious.
What. You don't like the "Scientific" or "Programmer" "Views" of the Mac "Calculator"? Or the RPN mode? Or the units conversions? Just sayin'. :-) 'Course, I'm still on 10.8.5 "Mountain Lion". "El Capitan" may have done away with those features.

TomS · 8 May 2016

harold said: I know we both agree that there are only two consistencies in the entire evolution denial world.
As usual, I agree with you. But I have to point out that there are two different meanings of the word "consistency": the logical coherence between statements; a group of people who provide political support.

harold · 8 May 2016

TomS said:
harold said: I know we both agree that there are only two consistencies in the entire evolution denial world.
As usual, I agree with you. But I have to point out that there are two different meanings of the word "consistency": the logical coherence between statements; a group of people who provide political support.
Indeed. Consistently, evolution denial is supported by right wing authoritarians. Consistently, they'll say anything that they think "contradicts evolution". Consistently, they'll either openly support, or make a huge effort not to contradict, claims that KJV Genesis stories are "literally true". Beyond that, there is no logical coherence or consistency to evolution denial whatsoever.

eric · 8 May 2016

Robert Byers said:
Rolf said: Seems Robert is lost way out in the woods here. It doesn't matter which of the advantaged ones survive. It follows from the advantage of being advantaged that they will have a higher reproductive success rate. That means that percentwise they will producing more desendants that the not-so-advantaged ones. A process like that means a percentwise higher number of advantaged ones survive and produce offspring in the population. In the long run the less advantaged varity faces the risk of disappearance, swamped by the advantaged ones. It goes without saying that there always will be an element of "luck" and chance in reproduction within a population but that doesn't eliminate the effect of differential reproductive success due to genetic differences. There is no picking going on, there is a process of survival and propagation going on.
AHA. Thats the criticism. This scientist isw saying the advantaged ones are so few and far between relative to the whole population that its not the advantaged surviving.
No he's saying that statistically the advantage wins out...but that on the individual level, this may not be the case. Any casino aficionado knows the difference. The casino plays the odds, and makes money. But you, who may have a slight statistical disadvantage, can make money on any given night. Repeat this pattern over and over again, across thousands of individuals and hundreds or thousands of generations, and "what the house plays" is practically guaranteed to occur. Its even more probable than "Vegas makes money this year."
This scientist is not saying there is not advantage but its not possible it effects anything due to the math of the population. He is saying on a curve the advantages eventually are meaningless in great numbers. Then he says it is great numbers that we are dealing with. its his instinct about probability.
There's no instinct involved here; its' just math. And there are billion dollar industries that make money off the same math that predicts evolution will improve species (ability to function within a specific ecosystem...)

Robert Byers · 8 May 2016

eric said:
Robert Byers said:
Rolf said: Seems Robert is lost way out in the woods here. It doesn't matter which of the advantaged ones survive. It follows from the advantage of being advantaged that they will have a higher reproductive success rate. That means that percentwise they will producing more desendants that the not-so-advantaged ones. A process like that means a percentwise higher number of advantaged ones survive and produce offspring in the population. In the long run the less advantaged varity faces the risk of disappearance, swamped by the advantaged ones. It goes without saying that there always will be an element of "luck" and chance in reproduction within a population but that doesn't eliminate the effect of differential reproductive success due to genetic differences. There is no picking going on, there is a process of survival and propagation going on.
AHA. Thats the criticism. This scientist isw saying the advantaged ones are so few and far between relative to the whole population that its not the advantaged surviving.
No he's saying that statistically the advantage wins out...but that on the individual level, this may not be the case. Any casino aficionado knows the difference. The casino plays the odds, and makes money. But you, who may have a slight statistical disadvantage, can make money on any given night. Repeat this pattern over and over again, across thousands of individuals and hundreds or thousands of generations, and "what the house plays" is practically guaranteed to occur. Its even more probable than "Vegas makes money this year."
This scientist is not saying there is not advantage but its not possible it effects anything due to the math of the population. He is saying on a curve the advantages eventually are meaningless in great numbers. Then he says it is great numbers that we are dealing with. its his instinct about probability.
There's no instinct involved here; its' just math. And there are billion dollar industries that make money off the same math that predicts evolution will improve species (ability to function within a specific ecosystem...)
Hmm. I don't think you are right about what he is saying . He is saying the advantaged doesn't win out. There are too few individuals. They make no difference to any population based on any rwal advantage they might have. Non advantaged ones also would be as likely to survive. In his DI talk he mentioned several kinds of creatures. Each making billions/millions of off spring/seed. The ones who survive is just the lucky. there is no curve on survival based on advantage in individuals. He actually is saying the probability of survival is always based on randomness. No selection on traits at all. Thats his instinct and what he saw in his work. On this thread folks here where saying his math was wrong. That even just a little advantage in a population would allow selection on it to make a new population withy the new trait(s). yet he is saying no selection is grabbing any trait. the population is too great to allow any advantaged ones to be selected. Possibly the only answer would be massive sudden extinction with a tiny population surviving and quickly selection on some individuals within it that allows them to make a new population. very unlikely biology proceeded this way.

Dave Luckett · 8 May 2016

Uh... guys, language pedant hat on.

"Consistency" means the property of holding two or more propositions at the same time in the same way without logical contradiction. (It also means the physical graininess of a substance, smooth to rough, but that need not concern us here.)

A word that means "a group of people who provide political support" is "constituency".

Language pedant hat now removed. Carry on.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 8 May 2016

Hi: I differ in understanding the points at stake.

Natural Selection is a general functioning terminology, that generally applies.

But the particulars are quite the contrary to Natural Selection.

For example GENE POOL, interbreeding, does not rely on Natural Selection as such. Though a stronger male of degraded GENE Pool might win out in breeding, this male is already in a downward road, that NATURAL SELECTION is not going to improve...!!!

The HUMAN GENE POOL is also on a downward road...!

SO the QUESTION would be rather, how does NATURAL SELECTION "create" a improved GENE POOL...! And we are not talking about the BIBLE or any RELIGION...!

Cheers,
George.
purelogic.

Dave Luckett · 9 May 2016

Your difficulty, 813f, lies in your definition of "stronger", as in "stronger male". Larger, more physically powerful males only succeed differentially where the environment selects for strength and size. It often does not. Metabolic economy, dexterity, light weight (as in species that fly or climb or use extended tree limbs), efficiency in food gathering or feeding (large teeth might detract, however impressive they are), speed or endurance or hardiness (often opposed by size or mass), reproductive efficiency (how good is your sperm at defeating the sperm of other males), sexual selection by the female, the relative success of opposed mating strategies, and so on. All these, and many other characteristics, have nothing to do with "strength", but they may - and do - produce greater "fitness".

That is how natural selection creates an improved gene pool - by selecting the characteristics that actually succeed in the extant environment. That environment includes many other species, and other members of the same species. And no, we are not talking about the Bible. Or at least, I'm not.

I can only guess at what you mean by "Though a stronger male of degraded GENE Pool might win out in breeding, this male is already in a downward road, that NATURAL SELECTION is not going to improve…!!!" Does "this male" mean you? If so, I can only infer that your complaint is that you're not getting any. My commiserations, if that is the case.

Dave Luckett · 9 May 2016

Oh, I see. Sorry. I misconstrued 813f. He means, I think, that a male of "degraded GENE pool" (sic) might have greater reproductive success, even though he is on a "downward road".

No. Wrong. Statistically, the male who enjoys greater reproductive success does so because he has better genes, not "degraded" ones. Better at thriving in the environment, that is. The whole point made by population genetics, as the head post demonstrates, is that despite the occasional reproductive success of individuals (not only males) who have less successful genetic traits, any genetic advantage in a given environment, however small, will create greater reproductive success and will rapidly diffuse through a population.

harold · 9 May 2016

Dave Luckett said: Uh... guys, language pedant hat on. "Consistency" means the property of holding two or more propositions at the same time in the same way without logical contradiction. (It also means the physical graininess of a substance, smooth to rough, but that need not concern us here.) A word that means "a group of people who provide political support" is "constituency". Language pedant hat now removed. Carry on.
Are you referring to this?
Consistently, evolution denial is supported by right wing authoritarians.
The word there is "consistently" not "consistency" and it is used correctly. Of course, the construction is deliberately humorous in a dry way, implicitly contrasting this consistent finding with their frequent use of mutually contradictory arguments. http://www.dictionary.com/browse/consistently "2.constantly adhering to the same principles, course, form, etc.: a consistent opponent." If you examine the political views of creationists you will consistently find that they are right wing authoritarians. The constituency they belong to is not inconsistent in time or across individuals.
No. Wrong. Statistically, the Better at thriving in the environment, that is.male who enjoys greater reproductive success does so because he has better genes, not “degraded” ones.
Thank you for this. One error which plagues even well-meaning people, sincerely trying to understand evolution, is strong biases, most notably judgmentalism and inability not to imagine a planning agency. I'd even go one step further than you and say that in many cases it is nonsensical to describe alleles as being "better" or "worse". Hell, even dominant alleles that are lethal in development, and can never be directly selected for, are "worse" only because humans subjectively perceive being selected for as a "good" quality. In many cases whether one allele or another is selected for depends on changeable factors in the environment, or linkage, or both. Alleles which confer a statistical reproductive advantage in a given environment have a better chance of being selected for, in that environment, than alleles that don't. "Selected for" means "increase in frequency in the population". It's that simple, but that's actually kind of difficult for humans to get a handle on.

eric · 9 May 2016

Robert Byers said: The ones who survive is just the lucky. there is no curve on survival based on advantage in individuals. He actually is saying the probability of survival is always based on randomness. No selection on traits at all. Thats his instinct and what he saw in his work. On this thread folks here where saying his math was wrong. That even just a little advantage in a population would allow selection on it to make a new population withy the new trait(s). yet he is saying no selection is grabbing any trait. the population is too great to allow any advantaged ones to be selected.
I believe you have accurately described his original argument, and our criticism of it. You have not, however, said how or why our criticism is incorrect. Your response has just been to repeat what he said.

Dave Luckett · 9 May 2016

harold asks: Are you referring to this? "Consistently, evolution denial is supported by right wing authoritarians."
No, harold. To this, from TomS:
there are two different meanings of the word “consistency”: the logical coherence between statements; a group of people who provide political support.
I suspect that English is a second language for TomS. He does a great deal better than I would, if I had to use any other than my native tongue.

TomS · 9 May 2016

Dave Luckett said:
harold asks: Are you referring to this? "Consistently, evolution denial is supported by right wing authoritarians."
No, harold. To this, from TomS:
there are two different meanings of the word “consistency”: the logical coherence between statements; a group of people who provide political support.
I suspect that English is a second language for TomS. He does a great deal better than I would, if I had to use any other than my native tongue.
Ouch!

Joe Felsenstein · 9 May 2016

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f said: Hi: I differ in understanding the points at stake. Natural Selection is a general functioning terminology, that generally applies. But the particulars are quite the contrary to Natural Selection. For example GENE POOL, interbreeding, does not rely on Natural Selection as such. Though a stronger male of degraded GENE Pool might win out in breeding, this male is already in a downward road, that NATURAL SELECTION is not going to improve...!!! The HUMAN GENE POOL is also on a downward road...! SO the QUESTION would be rather, how does NATURAL SELECTION "create" a improved GENE POOL...! And we are not talking about the BIBLE or any RELIGION...! Cheers, George. purelogic.
I disagree with your statement that the concept of a "gene pool" involves deterioration. The segregation of genes that are not closely linked means that the genotypes we see can be regarded as random draws of pairs of copies from a collection of all the copies at that locus. So for that locus it is equivalent to drawing twice from a "pool" of copies. At another locus, one draws from the "gene pool" for that locus. And so on. As long as there is no linkage disequilibrium (nonrandom association of alleles at different loci) this is a good approximation to the genotypes present in the population. But there is nothing there about whether the gene copies are good or bad for fitness. Natural selection does have a strong tendency to increase fitness (though not always). But fitnesses can also be decreased by environmental changes, deleterious mutations, migration, and genetic drift. Or those can create variability that is important for future response to natural selection. The mere concept of a gene pool simply says nothing about fitness. In the short term it does say that momentary associations of pairs of genes at a locus that may be favored by natural selection are torn apart by Mendelian segregation. But then there is no further tendency for mean fitness to decrease, just because of the presence of a gene pool.

Michael Fugate · 9 May 2016

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f said: Hi: I differ in understanding the points at stake. Natural Selection is a general functioning terminology, that generally applies. But the particulars are quite the contrary to Natural Selection. For example GENE POOL, interbreeding, does not rely on Natural Selection as such. Though a stronger male of degraded GENE Pool might win out in breeding, this male is already in a downward road, that NATURAL SELECTION is not going to improve...!!! The HUMAN GENE POOL is also on a downward road...! SO the QUESTION would be rather, how does NATURAL SELECTION "create" a improved GENE POOL...! And we are not talking about the BIBLE or any RELIGION...! Cheers, George. purelogic.
Does capitalizing words change their meanings? Probabilities are the bane of modern understanding. Anecdotes are just anecdotes. Your father may have smoked three packs a day for 50 years without developing lung cancer or emphysema, but it doesn't change the increased likelihood of a smoker developing both lung cancer and emphysema compared to a non-smoker. Even a non-smoker developing lung cancer or emphysema doesn't change that. Still variation after all these years - look at the long-term directional selection experiments - it is very difficult to run a population out of variation.

eric · 9 May 2016

Dave Luckett said: No, harold. To this, from TomS:
there are two different meanings of the word “consistency”: the logical coherence between statements; a group of people who provide political support.
I suspect that English is a second language for TomS. He does a great deal better than I would, if I had to use any other than my native tongue.
Tom I believe the word you were looking for was 'constituency.' Also, 'constituency' does not refer only to a politician's supporters, it refers to all the voters in their district or in the area they represent.

Richard Bond · 9 May 2016

For all the loyal Robert Byers fans at this site, I have to concede that, for once, he has a point, in his first post in this thread. Mootoo Kimura showed in a classic paper (http://www.well.ox.ac.uk/~gerton/Gulbenkian/kimura-diffusion.pdf) that even advantageous genes are unlikely to become established. In an admittedly simplified model, he calculated the probability of fixation as 2s/(1-exp(-4Ns)), where s is the selective advantage. For a large population, and small s, that means that the probability of a gene reaching fixation is 2s. For s=0.01, quoted in Joe Felsenstein's post, the probability is only 0.02. The calculations that demonstrate the inexorable progress of even a quite small advantage only come into play once the gene has spread through quite a large proportion of the population.

Michael Fugate · 9 May 2016

0.02 is 1 in 50 - not bad odds. Better than Leicester City winning the EPL!

Joe Felsenstein · 9 May 2016

I don't think Robert Byers made a valid point here. (It was, however on topic so I did not exile it to the Wall).

Yes, the fixation probability Kimura calculated for a single copy was (1-exp(-2s))/(1-exp(-4Ns)) which for N = 10,000 and s = 0.01 works out to 0.0198013 (2s, which is Haldans's 1927 approximation, is near that value).

But if the allele is instead neutral, the fixation probability is 1/20,000 which is 0.00005. That is more than 396 times smaller. So natural selection has a big effect, in spite of what Byers says.

We have been this way before, with the role of Byers played by Salvador Cordova. See my post on this at PT: here.

TomS · 9 May 2016

eric said:
Dave Luckett said: No, harold. To this, from TomS:
there are two different meanings of the word “consistency”: the logical coherence between statements; a group of people who provide political support.
I suspect that English is a second language for TomS. He does a great deal better than I would, if I had to use any other than my native tongue.
Tom I believe the word you were looking for was 'constituency.' Also, 'constituency' does not refer only to a politician's supporters, it refers to all the voters in their district or in the area they represent.
Yes, I was mistaken.

harold · 9 May 2016

Joe Felsenstein said: I don't think Robert Byers made a valid point here. (It was, however on topic so I did not exile it to the Wall). Yes, the fixation probability Kimura calculated for a single copy was (1-exp(-2s))/(1-exp(-4Ns)) which for N = 10,000 and s = 0.01 works out to 0.0198013 (2s, which is Haldans's 1927 approximation, is near that value). But if the allele is instead neutral, the fixation probability is 1/20,000 which is 0.00005. That is more than 396 times smaller. So natural selection has a big effect, in spite of what Byers says. We have been this way before, with the role of Byers played by Salvador Cordova. See my post on this at PT: here.
Byers has rarely made valid points in the past, by the way, this just isn't one of them. Nor are any of his defenses of science denial valid points. This is not a compliment to Byers - he has a much better track record of making valid points than Salvador Cordova or many other "more sophisticated" creationists.
even advantageous genes are unlikely to become established
Right, but that's completely different from saying advantageous genes are no more likely to become established than any other genes.

Joe Felsenstein · 9 May 2016

eric: Tom I believe the word you were looking for was 'constituency.' Also, 'constituency' does not refer only to a politician's supporters, it refers to all the voters in their district or in the area they represent. TomS Yes, I was mistaken.
OK, so the quote was supposed to read "Constituency, evolution denial is supported by right wing authoritarians.” ? Or perhaps. "Constituently, evolution denial is supported by right wing authoritarians." ? Seems really unlikely. More likely that it was a somewhat-vague statement in correct English, the original form "Consistently, evolution denial is supported by right wing authoritarians" where "consistently" used in the sense of "it is a consistent fact that ..." where "consistent" means "invariable" as in "he was consistently wrong about everything". Then it would be good English but an exaggeration, since there are people who are not right-wing authoritarians who deny global warming.

Robert Byers · 9 May 2016

Richard Bond said: For all the loyal Robert Byers fans at this site, I have to concede that, for once, he has a point, in his first post in this thread. Mootoo Kimura showed in a classic paper (http://www.well.ox.ac.uk/~gerton/Gulbenkian/kimura-diffusion.pdf) that even advantageous genes are unlikely to become established. In an admittedly simplified model, he calculated the probability of fixation as 2s/(1-exp(-4Ns)), where s is the selective advantage. For a large population, and small s, that means that the probability of a gene reaching fixation is 2s. For s=0.01, quoted in Joe Felsenstein's post, the probability is only 0.02. The calculations that demonstrate the inexorable progress of even a quite small advantage only come into play once the gene has spread through quite a large proportion of the population.
The concept from the DI scientist, and my understanding, is that the population is so great and diffused about that any advantage in individuals would never be selected on to make a new population. ! Its too small to make a dent. What the thread here is saying, it seems, to beat this IS that however few there are, STILL, new populations can be created with some new trait giving advantage for some niche. In fact just any single couple could be selected on if you will. The criticism is that this is not the real world of biology. The hugh number in a population would never be affected by this unless great extinction was also part of the equation. The dI scientist is saying evolution can't happen to THE EXISTING population by selection on so few. Its not like gambling.

Robert Byers · 9 May 2016

Joe Felsenstein said: I don't think Robert Byers made a valid point here. (It was, however on topic so I did not exile it to the Wall). Yes, the fixation probability Kimura calculated for a single copy was (1-exp(-2s))/(1-exp(-4Ns)) which for N = 10,000 and s = 0.01 works out to 0.0198013 (2s, which is Haldans's 1927 approximation, is near that value). But if the allele is instead neutral, the fixation probability is 1/20,000 which is 0.00005. That is more than 396 times smaller. So natural selection has a big effect, in spite of what Byers says. We have been this way before, with the role of Byers played by Salvador Cordova. See my post on this at PT: here.
You mean its a option evolution could have a effect on a real population. Hmm. Something about these numbers. THe DI scientist instinct/research on mutations in plants, as I undestand, is that such tiny advantages in some individuals can't evole the population. You seem to be saying however small, yet not too small, they can and should. i don't see why your stats are any different then saying a single couple could start a new population within the big population and then take over with the new trait(s).

Robert Byers · 9 May 2016

harold said:
Joe Felsenstein said: I don't think Robert Byers made a valid point here. (It was, however on topic so I did not exile it to the Wall). Yes, the fixation probability Kimura calculated for a single copy was (1-exp(-2s))/(1-exp(-4Ns)) which for N = 10,000 and s = 0.01 works out to 0.0198013 (2s, which is Haldans's 1927 approximation, is near that value). But if the allele is instead neutral, the fixation probability is 1/20,000 which is 0.00005. That is more than 396 times smaller. So natural selection has a big effect, in spite of what Byers says. We have been this way before, with the role of Byers played by Salvador Cordova. See my post on this at PT: here.
Byers has rarely made valid points in the past, by the way, this just isn't one of them. Nor are any of his defenses of science denial valid points. This is not a compliment to Byers - he has a much better track record of making valid points than Salvador Cordova or many other "more sophisticated" creationists.
even advantageous genes are unlikely to become established
Right, but that's completely different from saying advantageous genes are no more likely to become established than any other genes.
Advantaged genes in a hugh population are not a advantage. They are chump change. How big does the pop have to be? is this really how evolution created the diversity and complexity of biology? Rolling the dice(mutations) for every advantage ever used to go from this to that seems unlikely. I mean impossible. Its not believable or reasonable. Why is not happening now?

phhht · 9 May 2016

Robert Byers said: is this really how evolution created the diversity and complexity of biology?
Yup, as far as anyone can tell, that's pretty much how.
Rolling the dice(mutations) for every advantage ever used to go from this to that seems unlikely. I mean impossible.
But you're a person with no grasp of reality. You cannot tell what is possible from what is not. I mean, after all, you believe in the reality of gods.
Why is not happening now?
It IS happening now. Next question?

Daniel · 9 May 2016

Robert Byers said: Advantaged genes in a hugh population are not a advantage. They are chump change. How big does the pop have to be? is this really how evolution created the diversity and complexity of biology? Rolling the dice(mutations) for every advantage ever used to go from this to that seems unlikely. I mean impossible. Its not believable or reasonable.
Robert, is it really that hard to understand this? This is EXACTLY how a casino makes money. Not "similar", not "like"... but EXACTLY how a casino operates. On each game, they have a teenie tiny advantage, as low as 0.5%. Yet, on a huge population, they make millions a day. In your own words, the casino has "advantaged genes". Just the bare minimum, mind you. But they are enough to make them extremely profitable. You may not find believable or reasonable... which makes you exactly the kind of person a casino wants playing.

Malcolm · 10 May 2016

Daniel said:
Robert Byers said: Advantaged genes in a hugh population are not a advantage. They are chump change. How big does the pop have to be? is this really how evolution created the diversity and complexity of biology? Rolling the dice(mutations) for every advantage ever used to go from this to that seems unlikely. I mean impossible. Its not believable or reasonable.
Robert, is it really that hard to understand this? This is EXACTLY how a casino makes money. Not "similar", not "like"... but EXACTLY how a casino operates. On each game, they have a teenie tiny advantage, as low as 0.5%. Yet, on a huge population, they make millions a day. In your own words, the casino has "advantaged genes". Just the bare minimum, mind you. But they are enough to make them extremely profitable. You may not find believable or reasonable... which makes you exactly the kind of person a casino wants playing.
A casino's advantage in a huge gambling hall is not a advantage. They make chump change. How big does the casino's advantage have to be? Is this really how the mob created the massive economy of Las Vegas? Rolling dice for every game seems so unlikely. I mean impossible. Its not believable or reasonable.

DanHolme · 10 May 2016

Michael Fugate said: 0.02 is 1 in 50 - not bad odds. Better than Leicester City winning the EPL!
I would put money on it that, in the near future, there will be an internet law, a la Betteridge, Poe or Godwin, regarding use of the Leicester City analogy when discussing long odds on a blog. Though I couldn't tell you what the odds of that are, mind you.

Joe Felsenstein · 10 May 2016

Byers is raising the issue of species that are divided into multiple populations, with fitnesses that differ in different populations. He imagines that this prevents advantageous mutations from being incorporated.

Back in the 5th comment on this thread, in response to eric, I mentioned that there is a substantial literature in theoretical population genetics on natural selection that varies in time and space. In fact, in 1976, a mere 40 years ago, I published a review article on this literature, and I managed to cover 152 theoretical papers. Since then four decades have elapsed -- the literature has probably at least tripled.

I think that I will reserve comment on the general issue until Robert has read more of this literature. Right now I think he has read approximately zero of these papers.

Robert Byers · 10 May 2016

Daniel said:
Robert Byers said: Advantaged genes in a hugh population are not a advantage. They are chump change. How big does the pop have to be? is this really how evolution created the diversity and complexity of biology? Rolling the dice(mutations) for every advantage ever used to go from this to that seems unlikely. I mean impossible. Its not believable or reasonable.
Robert, is it really that hard to understand this? This is EXACTLY how a casino makes money. Not "similar", not "like"... but EXACTLY how a casino operates. On each game, they have a teenie tiny advantage, as low as 0.5%. Yet, on a huge population, they make millions a day. In your own words, the casino has "advantaged genes". Just the bare minimum, mind you. But they are enough to make them extremely profitable. You may not find believable or reasonable... which makes you exactly the kind of person a casino wants playing.
I accept the casino works this way with those odds. Yet is this a accurate analogy to biology? My side is saying that selection on the tiny advantage of some individuals would NOT affect the great, great, population. Much less be the driving engine for the evolution of biology from start to finish. Dull to complex. This doesn't happen said the scientist in the DI interview. Your side said the scientist got his math wrong. Just a little bit of advantage in enough individuals, then you say its enough using your math, will do the trick. Hmm. We say its too few individuals. You drag us into the casino. Hmm. A point here for us is that the HUGH population did not go extinct but all evolved up. Its quickly another hugh population based on the selected ones. New evolved ones. Hmm. I don't see why you couldn't say therefore just one couple do it. Yet we say one couple couldn't. Maybe evolutionism comes down to this. Your side says new populations can evolve from a single couple selected by the niche. on and on. We say in the real world this is impossible even if , by math, its possible. I think your side gets too comfortable with seeing more then a single couple being selected. Yet your claim does not need more then one couple or is helped. its still very few. Its about probability.

Robert Byers · 10 May 2016

Joe Felsenstein said: Byers is raising the issue of species that are divided into multiple populations, with fitnesses that differ in different populations. He imagines that this prevents advantageous mutations from being incorporated. Back in the 5th comment on this thread, in response to eric, I mentioned that there is a substantial literature in theoretical population genetics on natural selection that varies in time and space. In fact, in 1976, a mere 40 years ago, I published a review article on this literature, and I managed to cover 152 theoretical papers. Since then four decades have elapsed -- the literature has probably at least tripled. I think that I will reserve comment on the general issue until Robert has read more of this literature. Right now I think he has read approximately zero of these papers.
i have not read these papers. i don't want another topic to interfere here. My side is saying the odds are against advantageous genes changing a population. evolving it therefore. The instinct and so the odds thereof. Your side says the odds are fine. Like in the casino for the house. Yet its so small I don't see why you care about how small. Just a single couple/or individual would equally introduce the new genes in a new population. So while denying us ITS THAT SMALL and that small is big enough REALLY its all about how a few are selected on and some creature evolves. Our side says its too small in real biology. Your side can not ever see it as too small. Yet don't want it that small and say its not that small. It seems too small and our instinct is right. The probability is against any possibility of populations being changed by so few mutations in so few.

eric · 11 May 2016

Robert Byers said: My side is saying the odds are against advantageous genes changing a population. evolving it therefore. The instinct and so the odds thereof. Your side says the odds are fine. Like in the casino for the house. Yet its so small I don't see why you care about how small. Just a single couple/or individual would equally introduce the new genes in a new population.
The difference is, our side has actually done the math. In contrast you, Robert, are just going by your gut feeling. I think your problem here is actually illustrative of a large fraction of evolution-denial: like you, many people haven't or can't do the math. Instead they go by intuition or gut feel, and their intuition tells them that the amount of change between species is just too much to have happened by incremental steps across even millions of years. People are lousy at intuiting some types of statistics. Our gut feelings lead us to the wrong conclusion. You see this especially when we try to intuit whether some rare incident in a large population could have been chance or must have been designed. A good example is thinking of someone and then having them call; tabloids publish stories about that type of event every day, and innumerate people who believe in the supernatural cite such stories as evidence for a supernatural design. But when you actually do the math, factoring in the population of the US, how often people think of their friends and loved ones, rates of phone calls between people, you find that we would expect this to happen within the US several times a day. The going-by-gut people have make a dramatic institutional mistake, with their gut telling them something is an extremely low probability in the population when in fact its practically guaranteed to happen. Your rejection of the population genetics is pretty much a direct analogy to this; you haven't done the calculation, and because of that, you're intuiting an answer that's not just a little wrong, its dramatically wrong.
It seems too small and our instinct is right.
Everyone's instinct seems right to them. That's part of the reason why instinct isn't a good guide. We use math to figure out which instinct is actually right.

DS · 11 May 2016

Well my gut feeling is that booby will never be right about anything. Therefore, if I follow my gut feeling, all of his incoherent blubbering can be dismissed as ignorant nonsense. So, according to the logic being used by booby himself, he should be ridiculed or ignored. My intuition tells me that someone who refuses to learn proper grammar and spelling will never learn math either. My intuition tells me that, if the house edge in blackjack is 0.28% and the house almost always wins, that the odds of booby ever understanding the argument are much less than 0.28%. That and he should stay out of casinos, if he knows what is good for him.

Like Mikey, booby should come back when he has read the relevant literature. Maybe then someone will care what he thinks.

Just Bob · 11 May 2016

Robert, the whole human race's instinct told us for almost all of history that the Earth does not move, and that the sun, moon, and stars travel around our unmoving Earth, which is at the center of the solar system and the entire universe. That's when all of humanity was on "your side," including Bible writers.

That instinct was WRONG. Some people still go with that instinct, and some of them do it because that's what the Bible tells them. But they're still WRONG.

So what do you think? Did our instinct that the Earth doesn't move mislead us for all that time? Or do you go with your instinct (and the Bible) on that, too? Is astronomy also "atomic and unproven"?

Rolf · 11 May 2016

Robert, you keep refering to
My side is saying that selection on the tiny advantage of some individuals would NOT affect the great, great, population.
Robert, if a particular group of people within a population give birth to more offspring than average for the rest of the population, will the percentagewise size of that group within the population increase, decrease, or remain static? Think it over and tell us what you think. Who are "Your side", can you show us where anyone on your side have said what you are saying, or are you the ultimate YEC authority?

eric · 11 May 2016

DS said: My intuition tells me that, if the house edge in blackjack is 0.28% and the house almost always wins, that the odds of booby ever understanding the argument are much less than 0.28%. That and he should stay out of casinos, if he knows what is good for him.
I forget which book I was reading on skepticism, probabilistic innumeracy, and (how bad people are at) estimation when it comes to large combinations of events, but the example the book used was this: consider Julius Caesar dying on the forum floor, and uttering "Et tu, Brute?" with his last breath (yeah, he probably didn't actually say it; consider that bit artistic license). Now take a breath. What are the statistical odds that some of the air you just breathed in included some of the air Caesar breathed out? It seems practically impossible, right? Your gut probably says "infinitesimally small.' The true answer is 99.99...with so many 9's we should probably just give up and call it 100%.

Malcolm · 11 May 2016

Robert Byers said: It seems too small and our instinct is right. The probability is against any possibility of populations being changed by so few mutations in so few.
Your instinct is dead wrong. The situation with a huge population and a very small number of survivors is precisely where tiny advantages become fixed the fastest. To understand this, first it is important to remember that we are talking about mutations that are heritable. These won't provide an advantage to the individual in which they first arise, but will effect their offspring. If a beneficial mutation has a 1 in a million chance of arising in a population of one thousand, where ten percent survive to breed, It will take take long time before anything interesting happens. On the other hand if the population is in the billions, and the number that breed even lower, there will be thousands of beneficial mutations per generation. This is where luck becomes irrelevant. Luck effects every individual equally, so the chance of any one of those mutated individuals breeding is low, but the chance that at least 1 of them does is high. At that point, due to there being so few parents, the percentage of the next generation carrying that mutation will be high. Even a minor advantage will mean that the following generations will most likely almost all carry that mutation. This is basic population genetics.

Robert Byers · 11 May 2016

Rolf said: Robert, you keep refering to
My side is saying that selection on the tiny advantage of some individuals would NOT affect the great, great, population.
Robert, if a particular group of people within a population give birth to more offspring than average for the rest of the population, will the percentagewise size of that group within the population increase, decrease, or remain static? Think it over and tell us what you think. Who are "Your side", can you show us where anyone on your side have said what you are saying, or are you the ultimate YEC authority?
Its my side in those seeing the probability is against tiny numbers of thiose with a adavantage changing the existing population. Evolving it. Selection would not pick them unless it really was a winning advantage and the others die out. Yet the DI scientist was stressing this is not possible by the math. The thread here was it WAS possible. here we are! Yes your case would mean more increase of those outbreeding the others. The criticism of that is that in a hugh population its chump change always. This is the rub I think.

Scott F · 11 May 2016

Dave Luckett said: Oh, I see. Sorry. I misconstrued 813f. He means, I think, that a male of "degraded GENE pool" (sic) might have greater reproductive success, even though he is on a "downward road". No. Wrong. Statistically, the male who enjoys greater reproductive success does so because he has better genes, not "degraded" ones. Better at thriving in the environment, that is. The whole point made by population genetics, as the head post demonstrates, is that despite the occasional reproductive success of individuals (not only males) who have less successful genetic traits, any genetic advantage in a given environment, however small, will create greater reproductive success and will rapidly diffuse through a population.
I think you all might be missing the boat about 813f's comment. I think this part is telling:

The HUMAN GENE POOL is also on a downward road…!

813f may say (s)he isn't talking about "RELIGION", but that statement there sure sounds like "The Fall(tm)" to me, with the assumption that all mutations are "bad", and humans (in particular) are in a constant, often accelerating state of degradation.

Robert Byers · 11 May 2016

Malcolm said:
Robert Byers said: It seems too small and our instinct is right. The probability is against any possibility of populations being changed by so few mutations in so few.
Your instinct is dead wrong. The situation with a huge population and a very small number of survivors is precisely where tiny advantages become fixed the fastest. To understand this, first it is important to remember that we are talking about mutations that are heritable. These won't provide an advantage to the individual in which they first arise, but will effect their offspring. If a beneficial mutation has a 1 in a million chance of arising in a population of one thousand, where ten percent survive to breed, It will take take long time before anything interesting happens. On the other hand if the population is in the billions, and the number that breed even lower, there will be thousands of beneficial mutations per generation. This is where luck becomes irrelevant. Luck effects every individual equally, so the chance of any one of those mutated individuals breeding is low, but the chance that at least 1 of them does is high. At that point, due to there being so few parents, the percentage of the next generation carrying that mutation will be high. Even a minor advantage will mean that the following generations will most likely almost all carry that mutation. This is basic population genetics.
Hmm. If its about survivors then only a single couple surviving would create a new population. This would not be denied and so its not the point. Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish. Yet in biology reality this doesn't happen because populations never go extinct suddenly enough for the few . with the beneficial mutation, The evolutionists are forced to see very tiny numbers of individuals/couples bring great steps forward in the evolution of populations of something. Constantly and more. its not survival of the fittest genes but the fantastic non survival of genes just slightly different but were doing fine for a while. This is against instinct to this dI scientist who studied mutations in plant populations.

Joe Felsenstein · 11 May 2016

I'm done with answering Robert Byers in this thread. He just keeps repeating his assertions in spite of mathemtical calculations that prove him wrong. Rolf asks a great question:
Who are “Your side”, can you show us where anyone on your side have said what you are saying, or are you the ultimate YEC authority?
I suspect that not even fellow-YEC Salvador Cordova backs Byers's statements in this thread.

Rolf · 12 May 2016

From now on, I'll pretend Robert Byers doesn't exsist. I think all his posts should default to the Wall, except maybe his first in a thread to forestall censorship claims.

He's only a Drosophila in the ointment.

eric · 12 May 2016

Robert Byers said: Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
Completely untrue; all it takes is for those individuals to average more offspring. Two comparatively recent examples would be blond hair and lactose persistance. The first started (we think) out about 5,000 years ago in Lithuania or Scandinavia; at that time the world population was 14 million, yet it evolved in one small group. Did it's spread require some massive extermination of black-haired people? No! Blond hair has spread through the global human gene pool simply through sexual selection (probably). Lactose tolerance arose further back in time, probably about 12,000 years ago. Again, in one or a few small populations. Again, there was not mass deaths of the humans who didn't have it. Instead, it propagated through gene pools with animal husbandry - being able to survive off your cow's milk for years rather than slaughter it immediately conferred a natural selection advantage. Basically, it allowed those who had it to live as dairy farmers. Now about 80% of Europeans have this gene. This should be obvious, Robert, but genes make a dent any time the people who have them have more surviving kids, statistically/on average, than the people who don't. Over thousands of years, that's all it takes. It doesn't require some huge die-off.

TomS · 12 May 2016

eric said:
Robert Byers said: Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
Completely untrue; all it takes is for those individuals to average more offspring. Two comparatively recent examples would be blond hair and lactose persistance. The first started (we think) out about 5,000 years ago in Lithuania or Scandinavia; at that time the world population was 14 million, yet it evolved in one small group. Did it's spread require some massive extermination of black-haired people? No! Blond hair has spread through the global human gene pool simply through sexual selection (probably). Lactose tolerance arose further back in time, probably about 12,000 years ago. Again, in one or a few small populations. Again, there was not mass deaths of the humans who didn't have it. Instead, it propagated through gene pools with animal husbandry - being able to survive off your cow's milk for years rather than slaughter it immediately conferred a natural selection advantage. Basically, it allowed those who had it to live as dairy farmers. Now about 80% of Europeans have this gene. This should be obvious, Robert, but genes make a dent any time the people who have them have more surviving kids, statistically/on average, than the people who don't. Over thousands of years, that's all it takes. It doesn't require some huge die-off.
It isn't obvious. At least not to someone who is not up to understanding the math. Enough math to appreciate compound interest.

Rolf · 12 May 2016

I concur. I found an escape hatch with My Dear Aunt Sally, and parantheses. I assume that would be too much for Robert.

Bobsie · 12 May 2016

As a layman, this is my understanding.

Yes, of course in a single generation a beneficial mutation is chump change compared to the randomness throughout the gene pool. However, the power of natural selection becomes apparent as it gets magnified through successive generations.

Here's how: The randomness is always still there but it’s always different and never the same in subsequent generations, that’s the essence of “randomness”. On the other hand, the beneficial mutation plays the same advantage again and again in each subsequent generation bestowing the same advantage to an ever increasing proportion of the gene pool and eventually overwhelming the effect of any random noise variation.

Bobsie · 12 May 2016

Layman addendum: If the insect with the beneficial mutation that smashed against your windshield had not yet reproduced, then there is no beneficial mutation in the gene pool.

However, if that insect already had offspring, and that offspring had a minuscule reproductive advantage due to one or more of any circumstances; environment, biology, behavior, prey or predator to name a few; unless circumstances change again, the benefit derived from the mutation cannot be denied the gene pool. It’s inevitable. Success breeds success.

Malcolm · 12 May 2016

Robert Byers said:
Malcolm said:
Robert Byers said: It seems too small and our instinct is right. The probability is against any possibility of populations being changed by so few mutations in so few.
Your instinct is dead wrong. The situation with a huge population and a very small number of survivors is precisely where tiny advantages become fixed the fastest. To understand this, first it is important to remember that we are talking about mutations that are heritable. These won't provide an advantage to the individual in which they first arise, but will effect their offspring. If a beneficial mutation has a 1 in a million chance of arising in a population of one thousand, where ten percent survive to breed, It will take take long time before anything interesting happens. On the other hand if the population is in the billions, and the number that breed even lower, there will be thousands of beneficial mutations per generation. This is where luck becomes irrelevant. Luck effects every individual equally, so the chance of any one of those mutated individuals breeding is low, but the chance that at least 1 of them does is high. At that point, due to there being so few parents, the percentage of the next generation carrying that mutation will be high. Even a minor advantage will mean that the following generations will most likely almost all carry that mutation. This is basic population genetics.
Hmm. If its about survivors then only a single couple surviving would create a new population. This would not be denied and so its not the point. Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
And they do. Every generation, the majority of the offspring produced die without contributing to the next generation. That's where selection comes in.
Yet in biology reality this doesn't happen because populations never go extinct suddenly enough for the few . with the beneficial mutation,
Evolution doesn't require this, because it doesn't occur over the space of a single generation.
The evolutionists are forced to see very tiny numbers of individuals/couples bring great steps forward in the evolution of populations of something. Constantly and more. its not survival of the fittest genes but the fantastic non survival of genes just slightly different but were doing fine for a while.
Congratulations, you have hit on the reason that deleterious mutations don't build up over time. Those that carry them generally leave fewer offspring, so they are out competed by those that don't carry them.
This is against instinct to this dI scientist who studied mutations in plant populations.
And that is why you shouldn't trust your instincts when trying to do science.

Malcolm · 12 May 2016

Rolf said: From now on, I'll pretend Robert Byers doesn't exsist. I think all his posts should default to the Wall, except maybe his first in a thread to forestall censorship claims. He's only a Drosophila in the ointment.
I'm regretting replying to him now. He doesn't seem capable of understanding even basic maths. Unfortunately, now he will probably think that he has said something correct if I stop replying.

Eric Finn · 12 May 2016

eric said:
Robert Byers said: Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
Completely untrue; all it takes is for those individuals to average more offspring.
I will be bending in all directions simultaneously, but strictly speaking it is true that any mutation makes practically zero dent in the first or second generation. Further, most of them, even the “beneficial” mutations, will have zero impact even in the long run.
Two comparatively recent examples would be blond hair and lactose persistance. The first started (we think) out about 5,000 years ago in Lithuania or Scandinavia; at that time the world population was 14 million, yet it evolved in one small group. Did it's spread require some massive extermination of black-haired people? No! Blond hair has spread through the global human gene pool simply through sexual selection (probably). Lactose tolerance arose further back in time, probably about 12,000 years ago. Again, in one or a few small populations. Again, there was not mass deaths of the humans who didn't have it. Instead, it propagated through gene pools with animal husbandry - being able to survive off your cow's milk for years rather than slaughter it immediately conferred a natural selection advantage. Basically, it allowed those who had it to live as dairy farmers. Now about 80% of Europeans have this gene.
These are good examples of traits that have been established (but not fixed ?) in the human population. It has been predicted (in popular press) that blond hair and blue eyes will disappear in a few centuries. (I presume, gray does not count as blond.) I have not seen predictions concerning the lactose tolerance.
This should be obvious, Robert, but genes make a dent any time the people who have them have more surviving kids, statistically/on average, than the people who don't. Over thousands of years, that's all it takes. It doesn't require some huge die-off.
I will go with Joe Felsenstein that it is useless to argue with a person, who denies all logic, including mathematics. Even so, your nicely presented examples serve well to enlighten on the probabilities in biology for those who are not instinctly fluent in estimating them (i.e. all of us).

Robert Byers · 12 May 2016

eric said:
Robert Byers said: Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
Completely untrue; all it takes is for those individuals to average more offspring. Two comparatively recent examples would be blond hair and lactose persistance. The first started (we think) out about 5,000 years ago in Lithuania or Scandinavia; at that time the world population was 14 million, yet it evolved in one small group. Did it's spread require some massive extermination of black-haired people? No! Blond hair has spread through the global human gene pool simply through sexual selection (probably). Lactose tolerance arose further back in time, probably about 12,000 years ago. Again, in one or a few small populations. Again, there was not mass deaths of the humans who didn't have it. Instead, it propagated through gene pools with animal husbandry - being able to survive off your cow's milk for years rather than slaughter it immediately conferred a natural selection advantage. Basically, it allowed those who had it to live as dairy farmers. Now about 80% of Europeans have this gene. This should be obvious, Robert, but genes make a dent any time the people who have them have more surviving kids, statistically/on average, than the people who don't. Over thousands of years, that's all it takes. It doesn't require some huge die-off.
i understand the breeding more will trump those breeding less. The DI scientist isn't denying this or anyone. It must be that what the criticism is about IS that in real populations, as the scientist gave examples, the small number of mutations working through a few would never affect any actual population and thus bring evolution. Your side must FIRST have a great die off or a great failure to breed. Very unlikely in real; biology. It wouldn't explain evolution of anything from anything. Its too small to make a dent EVER unless strange events happen. My side is seeing successful populations being the norm and massive and not seeing how they could evole from mutations affecting a few WITHOUT great failure in the vast majority of a vast host. Thats the hunch here. Your sides math only works if thee is more math going on. a few mutations affecting a small percentage will not bring evolution uNLESS more math is included. You must include math about the ones not with the beneficial genes. I think thats the rub here.

Robert Byers · 12 May 2016

Bobsie said: As a layman, this is my understanding. Yes, of course in a single generation a beneficial mutation is chump change compared to the randomness throughout the gene pool. However, the power of natural selection becomes apparent as it gets magnified through successive generations. Here's how: The randomness is always still there but it’s always different and never the same in subsequent generations, that’s the essence of “randomness”. On the other hand, the beneficial mutation plays the same advantage again and again in each subsequent generation bestowing the same advantage to an ever increasing proportion of the gene pool and eventually overwhelming the effect of any random noise variation.
Thats my side(critics of the math ID/YEC) point here. The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population. So a few mutations will not do it like in the casino. in the casino no one needs to die. We understand a few selecte on will trump those who perish. Yet your side seems to presume the perishing is a fixed fact or it doesn't matter. it does. I think you guys math is wrong here.

Robert Byers · 12 May 2016

malcome.
You say its not the first generation that must die but IT must be eventually the whole population dies otherwise the few advantaged are always a trivial minority.
Evolutionary genetics is not based on casino math.
its based on a necessary oTHER event going on. the demise of the population without the advantage. It doesn't matter how many generations and indeed your predicting generations can keep going but are in decline for some reason. Why/ Until the decline there is no impact on that population and no evolution.

I think everyone here missed something.
Mutations will not change a population/evole it based on minor breeding events.Its essential the oTHER SIDE does not breed.
if it does breed there is no evolution of that type of creature.
So instinct rightly kicks in that too few won't change things.
Thats the point from the DI scientist.
Your side dOES need extinction and right quick.

Robert Byers · 12 May 2016

Eric Finn said:
eric said:
Robert Byers said: Even if in billions there are thousands of offspring with a new mutation however beneficial I don't see why it would make a dent. The rest must perish.
Completely untrue; all it takes is for those individuals to average more offspring.
I will be bending in all directions simultaneously, but strictly speaking it is true that any mutation makes practically zero dent in the first or second generation. Further, most of them, even the “beneficial” mutations, will have zero impact even in the long run.
Two comparatively recent examples would be blond hair and lactose persistance. The first started (we think) out about 5,000 years ago in Lithuania or Scandinavia; at that time the world population was 14 million, yet it evolved in one small group. Did it's spread require some massive extermination of black-haired people? No! Blond hair has spread through the global human gene pool simply through sexual selection (probably). Lactose tolerance arose further back in time, probably about 12,000 years ago. Again, in one or a few small populations. Again, there was not mass deaths of the humans who didn't have it. Instead, it propagated through gene pools with animal husbandry - being able to survive off your cow's milk for years rather than slaughter it immediately conferred a natural selection advantage. Basically, it allowed those who had it to live as dairy farmers. Now about 80% of Europeans have this gene.
These are good examples of traits that have been established (but not fixed ?) in the human population. It has been predicted (in popular press) that blond hair and blue eyes will disappear in a few centuries. (I presume, gray does not count as blond.) I have not seen predictions concerning the lactose tolerance.
This should be obvious, Robert, but genes make a dent any time the people who have them have more surviving kids, statistically/on average, than the people who don't. Over thousands of years, that's all it takes. It doesn't require some huge die-off.
I will go with Joe Felsenstein that it is useless to argue with a person, who denies all logic, including mathematics. Even so, your nicely presented examples serve well to enlighten on the probabilities in biology for those who are not instinctly fluent in estimating them (i.e. all of us).
Logic to the front. If any mutation fails to affect a pop in the first/second generation THEN why a hundred generations? Unless something else is happening. The math equation must include another bracket about the demise of the greater majority of the population. Otherwise a dent will always be just a dent. IOf it could survive . I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding. ID/YEC here is saying the math doesn't work for evolution . Unless there is great extinction. Thats why the scientist used the idea of billions of creatures in a group. IT will not be affected by the few. The billions. unless the billions cease to exist. any benefit must work right away or its not a benefit to the population. If its not then those GENES will vanish into the mix. Why is the logic wrong here? Popgenetics is not my subject but the math must add up.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 12 May 2016

eric said:
Robert Byers said: The ones who survive is just the lucky. there is no curve on survival based on advantage in individuals. He actually is saying the probability of survival is always based on randomness. No selection on traits at all. Thats his instinct and what he saw in his work. On this thread folks here where saying his math was wrong. That even just a little advantage in a population would allow selection on it to make a new population withy the new trait(s). yet he is saying no selection is grabbing any trait. the population is too great to allow any advantaged ones to be selected.
I believe you have accurately described his original argument, and our criticism of it. You have not, however, said how or why our criticism is incorrect. Your response has just been to repeat what he said.
Hi. No doubt that wishful thinking and babbling big words and no reality is as easy as your ill fetched Evolution! I do not believe in Evolution as such nor in JESUS! As I do not believe in "magic" from a dead MOTHER NATURE...!!! In logic and purelogic all physical or matter should have a known logic explanation or a not known one beyond our minds! But to infer Evolution directly because your small brain cannot explain a God or gods or entities, is proof or your small Intelligence source...! http://anagrammatt3.blogspot.ca/ But believe Science has been assaulted by MAGICIANS and ALCHEMISTS, and you name what...! INTERBREEDING, implies depleted numbers, etc...! What does it cause? IMPROVEMENT in GENETICS...??? Oh...! You guys talk bigger than your head or shoes! Cheers. Ask Mother Nature to better your minds intelligence! George.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 12 May 2016

813f
Hi. No doubt that wishful thinking and babbling big words and no reality is as easy as your ill fetched Evolution!

I do not believe in Evolution as such nor in JESUS! As I do not believe in “magic” from a dead MOTHER NATURE…!!! In logic and purelogic all physical or matter should have a known logic explanation or a not known one beyond our minds!

But to infer Evolution directly because your small brain cannot explain a God or gods or entities, is proof or your small Intelligence source…!

http://anagrammatt3.blogspot.ca/

But believe Science has been assaulted by MAGICIANS and ALCHEMISTS, and you name what…!

INTERBREEDING, implies depleted numbers, etc…! What does it cause? IMPROVEMENT in GENETICS…???

Oh…! You guys talk bigger than your head or shoes!

Cheers. Ask Mother Nature to better your minds intelligence!

George.

Dave Luckett · 12 May 2016

Here's a big word, George: intelligibility. Look it up.

Eric Finn · 12 May 2016

Robert Byers said: I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding.
Mendel came to a conclusion that genetically based traits are not diluted away by crossbreeding.
ID/YEC here is saying the math doesn't work for evolution . Unless there is great extinction.
As eric already pointed out, the rise of lactose tolerance did not involve any mass extinctions.
Thats why the scientist used the idea of billions of creatures in a group. IT will not be affected by the few. The billions. unless the billions cease to exist. any benefit must work right away or its not a benefit to the population.
The mathematics works the same way in a group of millions, billions or trillions of creatures. Some (only a few) of the “beneficial” mutations will be fixed in the population, while most of them are lost. And yes, it is rather wasteful.
If its not then those GENES will vanish into the mix. Why is the logic wrong here? Popgenetics is not my subject but the math must add up.
Maybe you could start with the work by Mendel.

Malcolm · 13 May 2016

Robert Byers said: malcome. You say its not the first generation that must die but IT must be eventually the whole population dies otherwise the few advantaged are always a trivial minority. Evolutionary genetics is not based on casino math. its based on a necessary oTHER event going on. the demise of the population without the advantage. It doesn't matter how many generations and indeed your predicting generations can keep going but are in decline for some reason. Why/ Until the decline there is no impact on that population and no evolution. I think everyone here missed something. Mutations will not change a population/evole it based on minor breeding events.Its essential the oTHER SIDE does not breed. if it does breed there is no evolution of that type of creature. So instinct rightly kicks in that too few won't change things. Thats the point from the DI scientist. Your side dOES need extinction and right quick.
No. Read carefully this time. In every generation , a much larger number of offspring are born than will survive to breed. For example, 100 out of 1,000,000. That would be a 1 in 10,000 chance of leaving offspring. But that also means that any individual that does survive long enough to breed will leave an average of 10,000 offspring in the following generation. If that individual passes on a beneficial gene to half of their offspring, that is 5,000 individuals in that generation with a genetic advantage. Even if that advantage is very small, the chances are very good that more than 1 parent of the next generation will pass it on to their offspring. Evolution by natural selection is inevitable in any population that has heritable traits and more offspring than can survive long enough to breed.

TomS · 13 May 2016

Eric Finn said:
Robert Byers said: I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding.
Mendel came to a conclusion that genetically based traits are not diluted away by crossbreeding.
ID/YEC here is saying the math doesn't work for evolution . Unless there is great extinction.
As eric already pointed out, the rise of lactose tolerance did not involve any mass extinctions.
Thats why the scientist used the idea of billions of creatures in a group. IT will not be affected by the few. The billions. unless the billions cease to exist. any benefit must work right away or its not a benefit to the population.
The mathematics works the same way in a group of millions, billions or trillions of creatures. Some (only a few) of the “beneficial” mutations will be fixed in the population, while most of them are lost. And yes, it is rather wasteful.
If its not then those GENES will vanish into the mix. Why is the logic wrong here? Popgenetics is not my subject but the math must add up.
Maybe you could start with the work by Mendel.
The waste of so many offspring being produced with so few surviving was being commented on in the 1700s. It was particularly evident with the great number of seeds being produced by plants. But then, with the use of microscopes, it was being observed in animals, too. This was not an idea dreamed up by evolutionists to make natural selection work. It was an observation of the ways of life before Darwin. And the understanding of how it works in natural selection requires two more things: genetics which accounts for variations not being diluted away; and doing the mathematics. Those two things, along with natural selection, only came together in the Modern Synthesis of about 1930s or so. People actually did the mathematics which showed how it works. Before that, it was not appreciated that a small advantage in survival would spread. Which is why there were speculations of how evolution must have worked, thinking that natural selection couldn't account for it. One cannot appreciate how it works just by going by intuition. Do the math.

eric · 13 May 2016

Robert Byers said: Logic to the front. If any mutation fails to affect a pop in the first/second generation THEN why a hundred generations?
Well that probably revolves around what we mean by 'a dent.' Eric Finn et al. are taking issue with me saying it makes 'a dent' immediately. They're pointing out that a gene will not propagate through a significant proportion of the gene pool in the first few generations. But if its propagating (for whatever reason - selection or drift), then eventually, barring some externality, it will. Its very much like compound interest in your bank account. Put $100 away at 2% compound interest and the first year, you may not consider the $2 extra a 'dent' on your original investment. Its a change, an increase, sure. But 'a dent'? Maybe too small to qualify for that label. Keep it in there for 30 years, though, and probably everyone will agree that the $81 extra you've now accumulated counts as 'a dent'.
I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding.
Your understanding of genetics seems on par with your understanding of statistics. No, that's not how it works. Find a textbook or mainstream source of information about genetics and learn. However to end on a more positive note, you may be interested to learn that that problem stumped Darwin too. He didn't have our knowledge of how inheritance works, of course, so his being stumped is a bit more understandable. But nevertheless, its curious that of all the mistakes about genetics you could make, you made that one.
ID/YEC here is saying the math doesn't work for evolution . Unless there is great extinction.
So how do you explain the growth of lactose tolerance in the global population, which has happened without any great extinction? How do you explain the fact that blond hair is no longer uniquely Scandinavian?

eric · 13 May 2016

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f said: But believe Science has been assaulted by MAGICIANS and ALCHEMISTS, and you name what...!
Well....I *did* transmute elements as a grad student, using secrets not known to you! Muhahahaha! But we used an accelerator rather than a philosopher's stone.
INTERBREEDING, implies depleted numbers, etc...! What does it cause? IMPROVEMENT in GENETICS...???
Ah, invidious religious racism. The only reason I'm replying to your post is to poke a finger in your eye on this one, because I can pretty much guess which direction your racism flag flies. Before you go pooh-pooh interbreeding, you may want to consider that current genetic evidence suggests that it's almost wholly Caucasians and Asians that interbred with Neanderthals and Denisovans. We can see their genes in our gene pool. Sub-Saharan Africans, on the other hand, have practically none of the genetic markers from neanderthals etc. If there is one variety of homo sapiens sapiens that could be considered 'most pure,' its actually them, not you. YOU are the product of racial interbreeding, not them. :)

Bobsie · 13 May 2016

The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.

gnome de net · 13 May 2016

Robert Byers said: Popgenetics is not my subject but the math must add up.
Please show us your math.

Joe Felsenstein · 13 May 2016

Many others have done a good job of answering Robert Byers when he says that, unless there is a great die-off of others, a beneficial mutant will not spread.

I do just want to mention that Byers's mistake is also committed by many other creationists and ID supporters. They often say that natural selection cannot create, it can only destroy, It eliminates the less fit but does not increase the more fit. There are two problems with this:

1. It ignores the role of differential fertility, as it assumes that all fitness differences are differential viability, and

2. It commits Byers's fallacy. It ignores the change of the frequencies of genotypes as the less fit are eliminated.

When the genotype frequencies change, and with them the gene frequencies, the composition of the population changes. Even if there were only one generation of this change, future gene frequencies would reflect the change.

These folks do not understand that populations generally have a excess reproduction. They seem never to have heard of density-dependent population size regulation. Eliminating the less viable does mean that, in the presence of density regulation, the more viable will increase. Not only in frequency, but also in actual numbers.

And of course this has been discussed, all the way back to Darwin, who made it an essential part of his arguments.

TomS · 13 May 2016

Joe Felsenstein said: Many others have done a good job of answering Robert Byers when he says that, unless there is a great die-off of others, a beneficial mutant will not spread. I do just want to mention that Byers's mistake is also committed by many other creationists and ID supporters. They often say that natural selection cannot create, it can only destroy, It eliminates the less fit but does not increase the more fit. There are two problems with this: 1. It ignores the role of differential fertility, as it assumes that all fitness differences are differential viability, and 2. It commits Byers's fallacy. It ignores the change of the frequencies of genotypes as the less fit are eliminated. When the genotype frequencies change, and with them the gene frequencies, the composition of the population changes. Even if there were only one generation of this change, future gene frequencies would reflect the change. These folks do not understand that populations generally have a excess reproduction. They seem never to have heard of density-dependent population size regulation. Eliminating the less viable does mean that, in the presence of density regulation, the more viable will increase. Not only in frequency, but also in actual numbers. And of course this has been discussed, all the way back to Darwin, who made it an essential part of his arguments.
Yes, there are those misunderstandings widespread among the deniers of evolution. (And, sorry to say, also among people who have no problem in accepting evolution.) That is what makes it worthwhile to respond. I just want to mention that one complaint about natural selection as a mechanism of theistic evolution is that it makes God's creation dependent on a negative mechanism: the death of the unfit. As you point out, though, natural selection is not confined to the death of the unfit. It is the difference in reproducing viable offspring. A variation which results in more offspring is a positive kind of natural selection.

Just Bob · 13 May 2016

Robert, do you know why we had to invent science? It was because our "instincts" were so often WRONG. Instinct couldn't tell us that the Earth rotates, or that there are micro-organisms that make you sick, or that smaller objects fall as fast as large ones, or that matter is made of atoms, or that that little static electric spark was something that could power a whole civilization -- and allow you to complain on the internet about how your instinct says science is wrong.

Flint · 13 May 2016

I keep getting the impression that Byers is visualizing competition among seeds, or the seed-equivalent of any species whose reproductive strategy is to crank out enormous numbers of potential reproducers, almost none of which will ever reach the breeding stage. He doesn't seem to grasp that the selection isn't between seeds, but between breeding adults. And that the adults that tend to survive to breed (if this occurred because they are of a variety that gives them a very slight edge) will then generate enormous numbers of seeds ALL of which possess this favorable variant. And if they all have it, it really doesn't matter which of them randomly reach the breeding stage.

Scott F · 13 May 2016

Bobsie said:
The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.
That's been Byers' problem all along. (Well, one of them, at any rate.) To Byers, "biology" begins and ends with the individual living organism. Interactions between individuals, even between generations in the same species, is not "biological". If "life" doesn't "evolve" within the individual living organism during it's lifetime, then there can be no "evolution". Each succeeding generation is magically unique, fixed, and unchanging, and is unrelated to the previous generation, or to any other organism in the environment. If you think, perhaps, that I jest, then you haven't been lurking here long enough.

Robert Byers · 13 May 2016

eric said:
Robert Byers said: Logic to the front. If any mutation fails to affect a pop in the first/second generation THEN why a hundred generations?
Well that probably revolves around what we mean by 'a dent.' Eric Finn et al. are taking issue with me saying it makes 'a dent' immediately. They're pointing out that a gene will not propagate through a significant proportion of the gene pool in the first few generations. But if its propagating (for whatever reason - selection or drift), then eventually, barring some externality, it will. Its very much like compound interest in your bank account. Put $100 away at 2% compound interest and the first year, you may not consider the $2 extra a 'dent' on your original investment. Its a change, an increase, sure. But 'a dent'? Maybe too small to qualify for that label. Keep it in there for 30 years, though, and probably everyone will agree that the $81 extra you've now accumulated counts as 'a dent'.
I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding.
Your understanding of genetics seems on par with your understanding of statistics. No, that's not how it works. Find a textbook or mainstream source of information about genetics and learn. However to end on a more positive note, you may be interested to learn that that problem stumped Darwin too. He didn't have our knowledge of how inheritance works, of course, so his being stumped is a bit more understandable. But nevertheless, its curious that of all the mistakes about genetics you could make, you made that one.
ID/YEC here is saying the math doesn't work for evolution . Unless there is great extinction.
So how do you explain the growth of lactose tolerance in the global population, which has happened without any great extinction? How do you explain the fact that blond hair is no longer uniquely Scandinavian?
I won't get into it but i don't think lactose or blond hair came this way. its a innate triggere as i see it. Its a guess it got into the population by breeding etc I think Germans and Slavs and Finns equally got blond hair without interbreeding. I think the error is about the original hugh population. It must be in the equation that is is nEWLY not breeding as well. The beneficial mutation affecting some indivuduals will not affect the big grouop without a trumping breeding dopminance and then time. however I think our side says this won't happen unless there is a problem in the original population. In short the beneficial mutation must indeed be beneficial with greater offspring. Yet the original population was doing fine and was hugh.

Scott F · 13 May 2016

eric said:
Robert Byers said: I don't see how a new gene beifit helps some indivuduals unless they have already formed another population. Otherwise it will vanish by breeding.
Your understanding of genetics seems on par with your understanding of statistics. No, that's not how it works. Find a textbook or mainstream source of information about genetics and learn. However to end on a more positive note, you may be interested to learn that that problem stumped Darwin too. He didn't have our knowledge of how inheritance works, of course, so his being stumped is a bit more understandable. But nevertheless, its curious that of all the mistakes about genetics you could make, you made that one.
eric, you need to take smaller steps. :-) Robert, eric is referring to Mendelian genetics. Mendel demonstrated (with "desktop" science) that inheritable traits come in "discrete", indivisible packets. The modern science of Genetics has since proven Mendel's work to be accurate. Your notion of a trait being washed out of a population "by breeding" relies on the incorrect "intuition" that genetic information is transmitted from one generation to the next through a smooth "blending" of traits from one generation to the next. If that were true, then you would be right, and that traits could "vanish by breeding". But that's not how genetics works. This basic fact of biology has been known for over a hundred years. Mendel's discrete packets of traits don't get "washed out" by breeding. These traits don't "vanish" completely. And because they don't, these traits can spread through a population slowly over time. Even if they aren't "beneficial", traits that are merely "not harmful" can spread though a population through a process neutral genetic drift. All that the traits have to be is "different". "Survival of the fittest" isn't even required. All that is required is Mendelian, "discrete" inherited traits, and the fact that more individuals are born than will live to breed.
Robert Byers said: I don't see how ...
In this case, your intuition is simply wrong. The fact that you don't know how something happens doesn't mean that it is impossible. I only means that you, personally, haven't learned enough to know that you don't know what you're talking about. Do you know how gravity works? I think you don't, because very few people do. Yet, gravity works whether you know how it works or not. Do you know how your computer or even an electric motor works? How your car's cruise control works? I bet you haven't the slightest idea. Yet they all work, even if you don't know how they work. Do you know how compound interest works? Do you know how your toilet works? Do you know how government works? I'm betting you don't. (And yes, they're all related.) Yet, again, it all works even if you don't know how it happens. Your lack of knowledge of a subject does not make that subject impossible. Yet your blind reliance on your "intuition" and "gut feelings" does make it impossible for you to gain any more knowledge. You think that you know it all. Therefore, you refuse (or are simply unable) to learn anything new. I know for a fact that there is a lot that I don't know. That's why I try and learn as much as I can, and why I humbly defer to those who demonstrate that they know more than I do, and are willing to teach me, as most of the folks here are willing to do.

Robert Byers · 13 May 2016

Bobsie said:
The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made. I see it this the evolutionists have missed they must get rid of the original population. Something must be wrong with them in breeding. NOT JUST outbreeded. I think this is the DI scientist instinct and then his aggressive questioning of the historical math on this. Your side sees not just a benefit but a very needed benefit for the whole groups survival at a hugh population level. SO you do need a denise in the original population. The mere casino math will not do it. The original group would not got anywhere. A new population would be created in fact.

Robert Byers · 13 May 2016

Joe Felsenstein said: Many others have done a good job of answering Robert Byers when he says that, unless there is a great die-off of others, a beneficial mutant will not spread. I do just want to mention that Byers's mistake is also committed by many other creationists and ID supporters. They often say that natural selection cannot create, it can only destroy, It eliminates the less fit but does not increase the more fit. There are two problems with this: 1. It ignores the role of differential fertility, as it assumes that all fitness differences are differential viability, and 2. It commits Byers's fallacy. It ignores the change of the frequencies of genotypes as the less fit are eliminated. When the genotype frequencies change, and with them the gene frequencies, the composition of the population changes. Even if there were only one generation of this change, future gene frequencies would reflect the change. These folks do not understand that populations generally have a excess reproduction. They seem never to have heard of density-dependent population size regulation. Eliminating the less viable does mean that, in the presence of density regulation, the more viable will increase. Not only in frequency, but also in actual numbers. And of course this has been discussed, all the way back to Darwin, who made it an essential part of his arguments.
It is about spreading a beneficial mutation into the original population and so a new population is created with the new mutation. So evolution has occurred. All this without a die off/extinction. Just a outpacing/outbreeding program. The DI scientist, and me, question this. somethings wrong here. against instinct. I think i found it. We are not saying the better breeders will not prevail. Yet we say without a demise in the original pop, a problem occurring, then they never would be changed. JUST a new population of the mutated type would be created. No matter how much outbreeding there is still the original group would stay as hugh as ever. no reason for its demise. Within your sides math there must be a reason for why the original population fails to breed. Not just outbreeded. You bring up about excess reproduction. Well that means, I think your saying, this excess is a problem. There is failure to survive because of it. Heavy competition for a limited resource. Yet our original population got and stayed hugh despite the limited resources. Its fine. The beneficial mutation is only a benefit is it is. Its not a benefit unless the original pop is suddenly in distress to some degree. otherwise just another population , alongside, will be created. In short the few should not affect the many unless the many are being otherwise affected in a negative way. In all these ideas of evolution the improved individuals/population must outcompete and so kill off the reproduction of the original group. I think this is the rub here. Evolutionism needs a important nutation gain for survival and so evolution taking place in that creature. Not just a neutral casino outbreeding will do. your side must include a equation for demise in the original population. If you do then all your stats is just saying a single couple , with a advantage will bring a evolved change in some population. our complaint is it won't happen casually.always a problem is needed because its hugh populations. i think thats the DI scientist hunch abouyt the math being wrong. Whew that wore me out.

PA Poland · 13 May 2016

Robert Byers said:
Bobsie said:
The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
From what festering orifice did you pull THAT stupid idea out of ? Real world populations are FINITE - if one group is increasing in number, SANE and RATIONAL people know that the other group must be decreasing. You appear to be quite willfully stupid - if the beneficial mutation is OUTPACING the original group, then the original group is becoming less and less. No massive die off is required for one mutation to take over a population - it can even happen with no selection. Simple chance can do it. An example : You have a bin with 500 red balls, 500 blue. Select one AT RANDOM, and 'duplicate it' - add another ball of that color to the bin. Then restore the population by removing a ball AT RANDOM. By naive 'intuition', it would seem the ratios would stay the same (always around 500 red, 500 blue). IN REALITY, what will happen is that eventually it will be all red or all blue. ONE ALLELE TOOK OVER THE POPULATION, AND NO EXCESSIVE DIE OFF WAS REQUIRED. Change the rules a bit - give the blue balls a 1% better chance of being selected. They still face the same odds of being removed, but have a slightly better chance of being replicated. End result - the bin will quickly be 100% blue. NO EXCESSIVE DIE OFF required; no special 'killing' of the red balls required. But I suspect this is beyond your flaccid comprehension, since you 'think' that your God requires you to be a brainless, gibbering imbecile. That closing your eyes, sticking your fingers in your ears and screaming 'THAT AM NOT SCIENCE !!! MAGIC MAN DIDIT !!!11!11!!!!!!!!' is a sound, scientific rebuttal any time something beyond your feeble intellect is presented to you (like any process of more than one step.) Initiating the usual posturing that the willfully stupid are prone to :

I see it this the evolutionists have missed they must get rid of the original population. Something must be wrong with them in breeding. NOT JUST outbreeded. I think this is the DI scientist instinct and then his aggressive questioning of the historical math on this.

RRiiIIiiIGHT ! When REALITY does not conform to your ignorant idea, the problem MUST be with reality !! There is no need to specifically slaughter the original population for a new allele to reach fixation, given the FACT that all members of a real population are MORTAL. They die eventually, and thus the composition of the population CHANGES. If only 10% of a population lives long enough to reproduce, that means that 90% die along the way, WHETHER OR NOT A NEW ALLELE IS IN THE POOL OR NOT. A beneficial allele just has a better chance of being in the 10% that live long enough to reproduce. Early on, when numbers are low, a beneficial allele can be lost. But only a willfully ignorant twit would then 'conclude' that selection cannot work at all. What will happen is the population size will remain the same, but the proportion that are mutant will increase as the older members die off and are replaced by newly born members.

Your side sees not just a benefit but a very needed benefit for the whole groups survival at a hugh population level. SO you do need a denise in the original population. The mere casino math will not do it. The original group would not got anywhere. A new population would be created in fact.

Examination of REALITY shows otherwise. Again, simpleton - the population size remains the same; the PROPORTION that are mutant increases until the whole population is mutant. No excessive die offs or specific slaughters are required. There is a human mutation - apolipoprotein AI Milano - that is currently INCREASING in a population in Italy. To date, 33 people have this allele - they are all descended from one person. So, if your fetid blubberings were valid, HOW did the number of people with the allele increase from one to thirty three ? By your muddle-headed 'instincts', there MUST be someone in Milan somehow killing off people in that village without the mutation ! Observations of REALITY show that is NOT the case ... !

Daniel · 14 May 2016

Robert Byers said: In all these ideas of evolution the improved individuals/population must outcompete and so kill off the reproduction of the original group. I think this is the rub here.
You keep saying and repeating that we need an "equation" for the other population to die off, to be destroyed. Of course not, that is your strawman idea of evolution. What you are also missing is that the non-mutant population does not have to die either. Both populations can, and usually do, split, and continue to grow along, diverging more and more each generation. That's why we got multiple species of, say, mouse. Or of salamanders. Or how we still have europeans when americans are descended from them. Basically, it's the "why are there still monkeys" idiocy. Christ, really, this has got to be one of the easiest things for even a high-schooler to understand. It's got easy math. It's got an analogy that everyone could understand, casinos. But one creationist back in the first comment page said that casinos make no money from gambling. I guess that is your brain on creationism... having denied every branch of science, they have now denied that gambling is a good business. This is how far they have fallen. I mean, Byers has repeated the same idiotic argument 10 times. He posts incomprehensible gibberish such as "The beneficial mutation is only a benefit is it is". He keeps misspelling the word "huge". He has enormous problems just constructing his sentences and making something barely legible, let alone coherent. I honestly can't even discern what he is trying to say half the time. Are we sure we are not dealing with a mentally challenged individual??

TomS · 14 May 2016

One thing which I disagree with you on.

Any mathematics at all is off-putting for very many people. Even middle-school level math.

That is why people patronize casinos, why they accept huge interest rates, etc. etc.

Bobsie · 14 May 2016

Robert Byers said:
Bobsie said:
The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
So you are asserting that your original group will never ever mate with any of the "new population" and consequently their genetic pool will always remain separated, isolated and pure; never to be tainted by the exponentially growing population with the beneficial trait? How do you propose keeping them separated and pure? Species enforced apartheid?

Bobsie · 14 May 2016

Mr. Byers, your "original" group doesn't ever die off; they all eventually "marry" off and join the successful "new" clan.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 14 May 2016

Dave Luckett said: Here's a big word, George: intelligibility. Look it up.
Oh! Yes, I looked up intelligibility, and it says something about SIGN LANGUAGE and ANALPHABETISM! Can somebody explain, after SELF-developing REPRODUCTION methods, then the CELL increases in complexity, to the biggest GENOMICS, accepted of THE SALAMANDER? ALSO rubbish DNA, is not a "negative load", but useful? So there were not enough numbers to better genetics, if that is a statement. So how do you make billions of numbers to occur? That is what must have happened is what you guys are presumptively saying! FIRST LETS MAKE LIFE IN A LABORATORY, THEN TELL YOUR SCIENCE EVOLUTION AND RELIGION "STORIES"...! MAGICIANS! George. Pure Logic and Logic. http://www.dictionary.com/browse/presumptively

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 14 May 2016

Author Profile Page A Masked Panda (813f) replied to a comment from Dave Luckett | May 14, 2016 11:21 AM | Reply
http://pandasthumb.org/archives/2016/05/a-devastating-c.html#comment-353005

Dave Luckett said:

Here’s a big word, George: intelligibility. Look it up.

Oh!

Yes, I looked up intelligibility, and it says something about SIGN LANGUAGE and ANALPHABETISM!

Can somebody explain, after SELF-developing REPRODUCTION methods, then the CELL increases in complexity, to the biggest GENOMICS, accepted of THE SALAMANDER?

ALSO rubbish DNA, is not a “negative load”, but useful?

So there were not enough numbers to better genetics, if that is a statement.

So how do you make billions of numbers to occur? That is what must have happened is what you guys are presumptively saying!

FIRST LETS MAKE LIFE IN A LABORATORY, THEN TELL YOUR SCIENCE EVOLUTION AND RELIGION “STORIES”…! MAGICIANS!

George. Pure Logic and Logic. http://www.dictionary.com/browse/presumptively

Just Bob · 14 May 2016

Robert, you have a competitor. Actually I can make more sense out of your writing than George's.

And you don't yell in our faces with CAPS LOCK in random places.

Dave Luckett · 14 May 2016

George is either a raging loony, or he's imitating one. It's impossible to say which, but my instinct is that he might be a bit too good to be true.

gnome de net · 14 May 2016

@ Robert Byers

You continue to insist that the math doesn’t work for evolution's influence on population genetics; that the math must add up.

We're still waiting for you to show us that failed math.

Robert Byers · 14 May 2016

Daniel said:
Robert Byers said: In all these ideas of evolution the improved individuals/population must outcompete and so kill off the reproduction of the original group. I think this is the rub here.
You keep saying and repeating that we need an "equation" for the other population to die off, to be destroyed. Of course not, that is your strawman idea of evolution. What you are also missing is that the non-mutant population does not have to die either. Both populations can, and usually do, split, and continue to grow along, diverging more and more each generation. That's why we got multiple species of, say, mouse. Or of salamanders. Or how we still have europeans when americans are descended from them. Basically, it's the "why are there still monkeys" idiocy. Christ, really, this has got to be one of the easiest things for even a high-schooler to understand. It's got easy math. It's got an analogy that everyone could understand, casinos. But one creationist back in the first comment page said that casinos make no money from gambling. I guess that is your brain on creationism... having denied every branch of science, they have now denied that gambling is a good business. This is how far they have fallen. I mean, Byers has repeated the same idiotic argument 10 times. He posts incomprehensible gibberish such as "The beneficial mutation is only a benefit is it is". He keeps misspelling the word "huge". He has enormous problems just constructing his sentences and making something barely legible, let alone coherent. I honestly can't even discern what he is trying to say half the time. Are we sure we are not dealing with a mentally challenged individual??
if a new population is created and so both pops live alongside each other then you defeat your side. its about one population evolving. That means the beneficial trait takes over the population by a marginal advantage in reproduction. Your misunderstanding the contention.

Robert Byers · 14 May 2016

Bobsie said:
Robert Byers said:
Bobsie said:
The next generations would not change the ratio UNLESS thee was a serious problem with the vast majority. Your side must always see a great die off or great failure in breeding in some great population.
No die off necessary, it's the population carrying the beneficial mutation that produce deferentially more offspring that increases their ratio exponentially over successive generations. You can't see beyond the initial generation. That's where you have blinded yourself.
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
So you are asserting that your original group will never ever mate with any of the "new population" and consequently their genetic pool will always remain separated, isolated and pure; never to be tainted by the exponentially growing population with the beneficial trait? How do you propose keeping them separated and pure? Species enforced apartheid?
that is a point. I think in all this discussion it was presumed the advantaged individuals did breed with the original ones. Then a increase in reproduction success of the NEW ones. So a breeding curve takes place. The advantage must be effective. I do have trouble seeing how this works in real populations as long as there is no new population. As i said it must be in the equation that the original group is not breeding as well and so is interfered with. Mere outpacing will not change the single population if its a thriving hugh population to start with. The error in the thread was saying the mere advantage would, by math, change the population into the new mutant population. In fact there must be a demise, a problem with the original group. Otherwise two populations would be created or just the original population get even bigger. The advantaged ones must not only outbreed but replace. The DI scientist saw this as a flaw in evolutionism. There is no reason for the group to be replaced as long as its thriving and hugh. The advantaged ones is trivial just by being advantaged. Your side erred in not seeing competition must mean a demise of the out competed., Its not like casino.

D Stowens · 14 May 2016

https://me.yahoo.com/a/PkZsUe11rOBbyBPTMFoa6pUDJUQQjTxv#0c747 said: I admit I am a total novice at this, but may I ask the following query: A population has a certain environmental distribution and produces a number of offspring - each of which finds itself in a different environment - in that environment there is a probability p(E) they will survive. The population has two allelles A and a. Overall there is a p(A) and p(a) that an individual will survive - lets say p(A) is greater. But in some environments p(E|a) is higher than p(E|A); in others the opposite is the case - which shakes out to give the overall p(A) and p(a). So whether the population prospers or declines depends upon two things - its distribution within the environment (if the population has all been washed to a hostile environment its prospects are dim) and the fitness of the genes to survive in that environment. After a generation there is a new population - again distributed (most likely differently now) within the environment. My untutored feeling is that the variation in environments will have a very significant impact on whether the species prospers or declines - I'm also fascinated by the assumption of a constant population in the population genetics model - it seems such an unrealistic constraint. Gene fitness clearly affects survivability, but so too does environmental variation - which of these two factors has a greater effect on the survivability of the entire species seems very complex and not to me obvious. The distribution of the species may be such that the environmental constraints have a far bigger impact on its survival than genetic ones. I don't want to give any support to creationists - and I assume far more complex modelling has been done in the last 75 years building on the models of Haldane, Wright and Fisher, but I can't help feeling the OP misses a point I'd love to understand how Modern evolutionary theory has built on the shoulders of these giants adding environmental issues into their models to help us try to understand when evolution is driven by Natural Selection, when it is driven by genetic drift and when it is driven by environmental factors - remember those poor dinosaurs and the radiations after their removal from the environment. A model with a static population in a constant environment where population distributions can depend upon tiny variations in genes which even though tiny give statistical guarantees of gene success are all very well, but effective population sizes and environments show these assumptions don't hold very well for the real world - have we built better assumptions into our models since these early models - I'd love to know.
Yes, the mathematics of evolution has progressed and become much more sophisticated that the simple system in the OP. Just wiki genetic drift or population genetics. The math may look daunting in the genetic drift article, but it really isn't bad if you keep reminding yourself what each symbol/letter means. The history part of the population genetics article is good to look at as it outlines the current controversies in evolution that anti-evolution people like to fixate on. I am particularly irritated when they talk about microevolution and macroevolution, totally misunderstanding that there is only evolution with changes over short time periods or long time periods. Your concern that population size and environmental effects are neglected in the simple math of the OP is unfounded. Yes, both of those features do enter into the arithmetic of real-life systems, but don't change the argument of the post. I like to use Darwin's famous finches to illustrate the fact that real-life evolution doesn't produce the simple pea-plant genetic pattern (genome in todays lingo). On one of the Galapagos islands, the birds have either large beaks or small beaks which provide different dietary efficiencies. During droughts the population size of the birds shrinks remarkably, and the average(!) beak size increases; with drought relief the opposite occurs. This, to me anyway, means that evolution has resulted in a species with a mixed genome (something I've learned is called "balanced genetic polymorphism") rather than a genome for a fixed beak size. What has evolved is a genome that allows the species as a whole to adapt to environmental changes.

DaveH · 15 May 2016

Robert Byers said: It is about spreading a beneficial mutation into the original population and so a new population is created with the new mutation. So evolution has occurred. All this without a die off/extinction. Just a outpacing/outbreeding program. The DI scientist, and me, question this. somethings wrong here. against instinct. I think i found it. We are not saying the better breeders will not prevail. Yet we say without a demise in the original pop, a problem occurring, then they never would be changed. JUST a new population of the mutated type would be created. No matter how much outbreeding there is still the original group would stay as hugh as ever. no reason for its demise. Within your sides math there must be a reason for why the original population fails to breed. Not just outbreeded. You bring up about excess reproduction. Well that means, I think your saying, this excess is a problem. There is failure to survive because of it. Heavy competition for a limited resource. Yet our original population got and stayed hugh despite the limited resources. Its fine. The beneficial mutation is only a benefit is it is. Its not a benefit unless the original pop is suddenly in distress to some degree. otherwise just another population , alongside, will be created. In short the few should not affect the many unless the many are being otherwise affected in a negative way. In all these ideas of evolution the improved individuals/population must outcompete and so kill off the reproduction of the original group. I think this is the rub here. Evolutionism needs a important nutation gain for survival and so evolution taking place in that creature. Not just a neutral casino outbreeding will do. your side must include a equation for demise in the original population. If you do then all your stats is just saying a single couple , with a advantage will bring a evolved change in some population. our complaint is it won't happen casually.always a problem is needed because its hugh populations. i think thats the DI scientist hunch abouyt the math being wrong. Whew that wore me out.
Amazingly, I think Byers has not realised the fact that (aside from some micro-organisms) the mortality of the original population is 100%! Bobby, everything that is born will eventually die. The "Original Population" that you are so worried about will all die of accident, disease or just plain old age, and it will be replaced by some of the offspring. Some of those will have the advantageous allele. This number will increase in later generations...

Rolf · 15 May 2016

With or without evolution, the genomics within a population are in a constant flux.
A population is not a fixed thing, each day sees a new population replacing the old one. Births and deaths at work 24/7. They are what does the work, genomics have a free ride.

DS · 15 May 2016

Robert,

If a beneficial dominant allele arises by mutation and the selection coefficient for homozygous recessives is 0.01, how many generations will be required for fixation of the new allele?

Look up the proper equation, do the math and tell us the answer. When you do, you will see how evolution works. Until you do, your intuition is worthless. You can go on ignoring the experts, that isn't gong to do you any good. You can go on in ignorance, ranting and raving that something is wrong somewhere, but that is not going to do you any good. You can go on thrashing up this thread for the next twenty pages, but that isn't going to do you any good either. Put up or shut up.

harold · 15 May 2016

I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
From what festering orifice did you pull THAT stupid idea out of ? Real world populations are FINITE - if one group is increasing in number, SANE and RATIONAL people know that the other group must be decreasing.
Actually sometimes it does happen the way Robert Byers described in this comment. https://en.wikipedia.org/wiki/Sympatric_speciationa A new subpopulation can be selected for without the ancestral population going extinct. He's wrong in implying that natural selection never leads to extinction, of course. "Robert Byers said it so it must be wrong" is a pretty good heuristic, but it's just a heuristic.

TomS · 15 May 2016

harold said:
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
From what festering orifice did you pull THAT stupid idea out of ? Real world populations are FINITE - if one group is increasing in number, SANE and RATIONAL people know that the other group must be decreasing.
Actually sometimes it does happen the way Robert Byers described in this comment. https://en.wikipedia.org/wiki/Sympatric_speciationa A new subpopulation can be selected for without the ancestral population going extinct. He's wrong in implying that natural selection never leads to extinction, of course. "Robert Byers said it so it must be wrong" is a pretty good heuristic, but it's just a heuristic.
I fully agree with what you are saying, but (and I am not a scientist, so take this as a request for clarification for me) I would think that the distinction is between anagenesis vs. cladogenesis; not sympatric vs. allopatric.

TomS · 15 May 2016

harold said:
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
From what festering orifice did you pull THAT stupid idea out of ? Real world populations are FINITE - if one group is increasing in number, SANE and RATIONAL people know that the other group must be decreasing.
Actually sometimes it does happen the way Robert Byers described in this comment. https://en.wikipedia.org/wiki/Sympatric_speciationa A new subpopulation can be selected for without the ancestral population going extinct. He's wrong in implying that natural selection never leads to extinction, of course. "Robert Byers said it so it must be wrong" is a pretty good heuristic, but it's just a heuristic.
I fully agree with what you are saying, but (and I am not a scientist, so take this as a request for clarification for me) I would think that the distinction is between anagenesis vs. cladogenesis; not sympatric vs. allopatric.

harold · 15 May 2016

TomS said:
harold said:
I see the generation spectrum./ YES. The ratio must change. Yes the beneficial mutation in individuals will outpace the original group to a end result. Yet that original group will not decrease or vanish and so will never be effected. Never evole. So oNLY a new population will be made.
From what festering orifice did you pull THAT stupid idea out of ? Real world populations are FINITE - if one group is increasing in number, SANE and RATIONAL people know that the other group must be decreasing.
Actually sometimes it does happen the way Robert Byers described in this comment. https://en.wikipedia.org/wiki/Sympatric_speciationa A new subpopulation can be selected for without the ancestral population going extinct. He's wrong in implying that natural selection never leads to extinction, of course. "Robert Byers said it so it must be wrong" is a pretty good heuristic, but it's just a heuristic.
I fully agree with what you are saying, but (and I am not a scientist, so take this as a request for clarification for me) I would think that the distinction is between anagenesis vs. cladogenesis; not sympatric vs. allopatric.
That is also correct. The bottom line is that sometimes a beneficial allele can arise in a population, be selected for, and yet the ancestral condition, lacking the new allele, may also not go extinct. This would probably classically happen if the new allele allows exploitation of something in the niche that the original population couldn't exploit. This might cause the new phenotype to do well, but without strongly competing with the old phenotype.

harold · 15 May 2016

To imply that emergence of a new adaptation forces the extinction of ancestors would not only be to commit the "why are there still monkeys" fallacy, but also, would raise the question "why is there more than one species on Earth", as, if every time a beneficial allele arose, it rapidly became fixed and the ancestral phenotype rapidly became extinct, there would be one or two species at any given time, although never the same species for long.

harold · 15 May 2016

Nothing I am saying is in dispute with the basic points made by Joe Felsenstein or others, including PA Poland, nor should any agreement with the many very, very wrong statements made by Byers in this thread be imputed to me. Some of Byers' early points amounted to denial of math that has been proven since the 18th century, although he seems to have moved away from that as the thread progressed.

A lot of it comes down to what we define as the population.

If all individuals are still considered members of the population, then of course the frequency of all other alleles at that locus must decrease for the new beneficial allele at that locus to increase in frequency. (This is true regardless of changes in absolute population size.)

If we allow for new populations branching off of the old population, the new allele may come to define a new population.

Ravi · 15 May 2016

DaveH said: Amazingly, I think Byers has not realised the fact that (aside from some micro-organisms) the mortality of the original population is 100%! Bobby, everything that is born will eventually die. The "Original Population" that you are so worried about will all die of accident, disease or just plain old age, and it will be replaced by some of the offspring. Some of those will have the advantageous allele. This number will increase in later generations...
All evolutuionist population genetics models are predicated on a population that is static and not naturally increasing (differential survival). They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring than there are scarce resources to sustain them. That is clearly not true for large organisms like whales and elephants who don't produce many offspring and so there is less competition for the resources. Any survival advantage is therefore likely not to result in relatively more reproduction.

DS · 15 May 2016

Ravi said:
DaveH said: Amazingly, I think Byers has not realised the fact that (aside from some micro-organisms) the mortality of the original population is 100%! Bobby, everything that is born will eventually die. The "Original Population" that you are so worried about will all die of accident, disease or just plain old age, and it will be replaced by some of the offspring. Some of those will have the advantageous allele. This number will increase in later generations...
All evolutuionist population genetics models are predicated on a population that is static and not naturally increasing (differential survival). They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring than there are scarce resources to sustain them. That is clearly not true for large organisms like whales and elephants who don't produce many offspring and so there is less competition for the resources. Any survival advantage is therefore likely not to result in relatively more reproduction.
Sorry wrong. Look up "differential mortality". You can also feel free to take a crack at the question I asked booby. Somehow, I don;t think he is going to give it a try.

Just Bob · 15 May 2016

All evolutuionist population genetics models...

Really? All? Have you surveyed them ALL?

They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring ...

Really? Always? Have you asked all evolutionists if they always assume that?

Joe Felsenstein · 15 May 2016

Ravi said: ... All evolutuionist population genetics models are predicated on a population that is static and not naturally increasing (differential survival). They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring than there are scarce resources to sustain them. That is clearly not true for large organisms like whales and elephants who don't produce many offspring and so there is less competition for the resources. Any survival advantage is therefore likely not to result in relatively more reproduction.
Well, do you know why we so easily assume that populations typically produce more offspring than can survive? Because they do. Because if they didn't, if they, say, produced a few fewer offspring than parents, then they would decline in numbers. And if that continues, guess what? They would go extinct. And then, after that, they would be not very interesting to model. Even whales and elephants produce a reproductive excess.

Robert Byers · 15 May 2016

D Stowens said:
https://me.yahoo.com/a/PkZsUe11rOBbyBPTMFoa6pUDJUQQjTxv#0c747 said: I admit I am a total novice at this, but may I ask the following query: A population has a certain environmental distribution and produces a number of offspring - each of which finds itself in a different environment - in that environment there is a probability p(E) they will survive. The population has two allelles A and a. Overall there is a p(A) and p(a) that an individual will survive - lets say p(A) is greater. But in some environments p(E|a) is higher than p(E|A); in others the opposite is the case - which shakes out to give the overall p(A) and p(a). So whether the population prospers or declines depends upon two things - its distribution within the environment (if the population has all been washed to a hostile environment its prospects are dim) and the fitness of the genes to survive in that environment. After a generation there is a new population - again distributed (most likely differently now) within the environment. My untutored feeling is that the variation in environments will have a very significant impact on whether the species prospers or declines - I'm also fascinated by the assumption of a constant population in the population genetics model - it seems such an unrealistic constraint. Gene fitness clearly affects survivability, but so too does environmental variation - which of these two factors has a greater effect on the survivability of the entire species seems very complex and not to me obvious. The distribution of the species may be such that the environmental constraints have a far bigger impact on its survival than genetic ones. I don't want to give any support to creationists - and I assume far more complex modelling has been done in the last 75 years building on the models of Haldane, Wright and Fisher, but I can't help feeling the OP misses a point I'd love to understand how Modern evolutionary theory has built on the shoulders of these giants adding environmental issues into their models to help us try to understand when evolution is driven by Natural Selection, when it is driven by genetic drift and when it is driven by environmental factors - remember those poor dinosaurs and the radiations after their removal from the environment. A model with a static population in a constant environment where population distributions can depend upon tiny variations in genes which even though tiny give statistical guarantees of gene success are all very well, but effective population sizes and environments show these assumptions don't hold very well for the real world - have we built better assumptions into our models since these early models - I'd love to know.
Yes, the mathematics of evolution has progressed and become much more sophisticated that the simple system in the OP. Just wiki genetic drift or population genetics. The math may look daunting in the genetic drift article, but it really isn't bad if you keep reminding yourself what each symbol/letter means. The history part of the population genetics article is good to look at as it outlines the current controversies in evolution that anti-evolution people like to fixate on. I am particularly irritated when they talk about microevolution and macroevolution, totally misunderstanding that there is only evolution with changes over short time periods or long time periods. Your concern that population size and environmental effects are neglected in the simple math of the OP is unfounded. Yes, both of those features do enter into the arithmetic of real-life systems, but don't change the argument of the post. I like to use Darwin's famous finches to illustrate the fact that real-life evolution doesn't produce the simple pea-plant genetic pattern (genome in todays lingo). On one of the Galapagos islands, the birds have either large beaks or small beaks which provide different dietary efficiencies. During droughts the population size of the birds shrinks remarkably, and the average(!) beak size increases; with drought relief the opposite occurs. This, to me anyway, means that evolution has resulted in a species with a mixed genome (something I've learned is called "balanced genetic polymorphism") rather than a genome for a fixed beak size. What has evolved is a genome that allows the species as a whole to adapt to environmental changes.
This is not the discussion. This genome, you claim, allowing the species to adapt would be a rejection of a beneficial gene bringing the whole population , eventually, into the new gene type.

Robert Byers · 15 May 2016

DaveH said:
Robert Byers said: It is about spreading a beneficial mutation into the original population and so a new population is created with the new mutation. So evolution has occurred. All this without a die off/extinction. Just a outpacing/outbreeding program. The DI scientist, and me, question this. somethings wrong here. against instinct. I think i found it. We are not saying the better breeders will not prevail. Yet we say without a demise in the original pop, a problem occurring, then they never would be changed. JUST a new population of the mutated type would be created. No matter how much outbreeding there is still the original group would stay as hugh as ever. no reason for its demise. Within your sides math there must be a reason for why the original population fails to breed. Not just outbreeded. You bring up about excess reproduction. Well that means, I think your saying, this excess is a problem. There is failure to survive because of it. Heavy competition for a limited resource. Yet our original population got and stayed hugh despite the limited resources. Its fine. The beneficial mutation is only a benefit is it is. Its not a benefit unless the original pop is suddenly in distress to some degree. otherwise just another population , alongside, will be created. In short the few should not affect the many unless the many are being otherwise affected in a negative way. In all these ideas of evolution the improved individuals/population must outcompete and so kill off the reproduction of the original group. I think this is the rub here. Evolutionism needs a important nutation gain for survival and so evolution taking place in that creature. Not just a neutral casino outbreeding will do. your side must include a equation for demise in the original population. If you do then all your stats is just saying a single couple , with a advantage will bring a evolved change in some population. our complaint is it won't happen casually.always a problem is needed because its hugh populations. i think thats the DI scientist hunch abouyt the math being wrong. Whew that wore me out.
Amazingly, I think Byers has not realised the fact that (aside from some micro-organisms) the mortality of the original population is 100%! Bobby, everything that is born will eventually die. The "Original Population" that you are so worried about will all die of accident, disease or just plain old age, and it will be replaced by some of the offspring. Some of those will have the advantageous allele. This number will increase in later generations...
this is the rub from the DI interview. The scientist said it was too small a number to change the hugh populations. The thread was about showing the math of reproductive dominance would do this in time. So I agreed with the DI scientist that as long as the original population is thriving and hugh then the trivial numbers with a advantaged gene would not make a dent ever. I understand a outpacing of reproduction because of a advantage. Yet without some interference with the original pop WHY SHOULD THEY be overtaken.? So I think the evolutionist error was they must include there is limited resources/competition. If no competition/limited resources then the original pop will do as well. Possibly a new pop alongside being created. A new species. I also am unsure if the advantaged ones are breeding with the original ones. A spoiler perhaps. i think the DI scientist point is that theres nothing wrong with the hugh pops, in billions, and so no evolution takes place because of a few advantaged genes in some individuals. Yet the thread is about this is what happens.

Robert Byers · 15 May 2016

harold said: Nothing I am saying is in dispute with the basic points made by Joe Felsenstein or others, including PA Poland, nor should any agreement with the many very, very wrong statements made by Byers in this thread be imputed to me. Some of Byers' early points amounted to denial of math that has been proven since the 18th century, although he seems to have moved away from that as the thread progressed. A lot of it comes down to what we define as the population. If all individuals are still considered members of the population, then of course the frequency of all other alleles at that locus must decrease for the new beneficial allele at that locus to increase in frequency. (This is true regardless of changes in absolute population size.) If we allow for new populations branching off of the old population, the new allele may come to define a new population.
No denial of math or evolution in my answers. I think your right . Its about what the population is. The DI scientist and me see the original pop as thriving and hugh. So why should a few advantaged ones change the pop. HMMM. your side says it will happen and must by the math. If the original pop was always increasing why should the greater increasing advantaged ones replace them? Why not just a greater number of the creature or two new populations? Why would not a new population be created before the demise of the original population.? I think thats the instict of criticism from my side.

Robert Byers · 15 May 2016

Ravi said:
DaveH said: Amazingly, I think Byers has not realised the fact that (aside from some micro-organisms) the mortality of the original population is 100%! Bobby, everything that is born will eventually die. The "Original Population" that you are so worried about will all die of accident, disease or just plain old age, and it will be replaced by some of the offspring. Some of those will have the advantageous allele. This number will increase in later generations...
All evolutuionist population genetics models are predicated on a population that is static and not naturally increasing (differential survival). They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring than there are scarce resources to sustain them. That is clearly not true for large organisms like whales and elephants who don't produce many offspring and so there is less competition for the resources. Any survival advantage is therefore likely not to result in relatively more reproduction.
I think you are on to something here. i think this thread presumed the pop was static when in actual biology it isn't. that was the DI scientist complaint. he saw a thriving hugh population being said to be replaced by a tiny number of mutations in some individuals over time. Yet nothing stopping resources. For the casino math to work to bring evolution to the whole population there must be a decline in the original population as its replaced by the incoming new population. As in whales this would not happen very much. It might be a serious flaw in evolutionary thinking. Darwin did see a packed system desperate to survive.

Robert Byers · 16 May 2016

Joe Felsenstein said:
Ravi said: ... All evolutuionist population genetics models are predicated on a population that is static and not naturally increasing (differential survival). They also blindly accept the Darwinian-Malthusian dogma that there are always more offpsring than there are scarce resources to sustain them. That is clearly not true for large organisms like whales and elephants who don't produce many offspring and so there is less competition for the resources. Any survival advantage is therefore likely not to result in relatively more reproduction.
Well, do you know why we so easily assume that populations typically produce more offspring than can survive? Because they do. Because if they didn't, if they, say, produced a few fewer offspring than parents, then they would decline in numbers. And if that continues, guess what? They would go extinct. And then, after that, they would be not very interesting to model. Even whales and elephants produce a reproductive excess.
For our discussion the original population was thriving and hugh. So why should the advantaged ones(the genes giving more offspring) replace the original group? Why not just greater populations? Why not two populations (now two species) before the original becoming the new one entirely.? In all this its a question to me if the advantaged ones are interbreeding with the original over the whole time even as both parties are still in hugh numbers. A minor point. In the 1800's whales were in fantastic greater numbers for all species. So today they never would be over reproduced relative to resources. It is a point here that the evolution side is seeing restricted resources and competition. IF SO this would be a factor nullifying the mere cassino math as doing the trick.

Ravi · 16 May 2016

Robert Byers said: I think you are on to something here. i think this thread presumed the pop was static when in actual biology it isn't. that was the DI scientist complaint. he saw a thriving hugh population being said to be replaced by a tiny number of mutations in some individuals over time. Yet nothing stopping resources. For the casino math to work to bring evolution to the whole population there must be a decline in the original population as its replaced by the incoming new population.
People like Felsenstein model their populations as existing within a deteriorating environment where there is a shortage of resources or overpredation. There might be a time when this is indeed the case, but the fact is that populations usually exist under stable and normal conditions where there is a symbiotic balance between reproduction and the availabiity of food etc.
As in whales this would not happen very much.It might be a serious flaw in evolutionary thinking. Darwin did see a packed system desperate to survive.
It is a real flaw in Darwinist thinking - some organisms just don't reproduce in sufficient numbers for a slightly beneficial change to be "selected". The unrealistic cost of replacement, of course, is the dilemma faced by Haldane.

DS · 16 May 2016

DS said: Robert, If a beneficial dominant allele arises by mutation and the selection coefficient for homozygous recessives is 0.01, how many generations will be required for fixation of the new allele? Look up the proper equation, do the math and tell us the answer. When you do, you will see how evolution works. Until you do, your intuition is worthless. You can go on ignoring the experts, that isn't gong to do you any good. You can go on in ignorance, ranting and raving that something is wrong somewhere, but that is not going to do you any good. You can go on thrashing up this thread for the next twenty pages, but that isn't going to do you any good either. Put up or shut up.
its very telling that you run from this question

Ravi · 16 May 2016

Joe Felsenstein said: Well, do you know why we so easily assume that populations typically produce more offspring than can survive? Because they do. Because if they didn't, if they, say, produced a few fewer offspring than parents, then they would decline in numbers. And if that continues, guess what? They would go extinct.
Not so. If most of the eggs laid by an organism are gobbled up by a predator, this does not mean that they could not have survived had they been allowed to grow up. Also, those who do escape predation in this scenario do so because of sheer luck rather than any survival benefit.
Even whales and elephants produce a reproductive excess.
So you accept that if organisms control their reproduction rate in line with their available resources, as does also clearly happen in the wild, then evolution by natural selection is greatly impaired?

DS · 16 May 2016

Ravi said: It is a real flaw in Darwinist thinking - some organisms just don't reproduce in sufficient numbers for a slightly beneficial change to be "selected". The unrealistic cost of replacement, of course, is the dilemma faced by Haldane.
No, it isn't. In fact , theoretical and empirical evidence shows that the cost of replacement is not at all prohibitive for slow to medium replacement rates. As for rapid replacement: http://www.pnas.org/content/71/10/3863.full.pdfor rapid replacement: this reference demonstrates that that isn't really much of a problem either. Creationists are always trying to use Haldane's "dilemma" as if it had not been addressed adequately. In reality, it is only their understanding that is inadequate.

DS · 16 May 2016

Ravi said: It is a real flaw in Darwinist thinking - some organisms just don't reproduce in sufficient numbers for a slightly beneficial change to be "selected". The unrealistic cost of replacement, of course, is the dilemma faced by Haldane.
No, it isn't. In fact , theoretical and empirical evidence shows that the cost of replacement is not at all prohibitive for slow to medium replacement rates. As for rapid replacement: http://www.pnas.org/content/71/10/3863.full.pdfor rapid replacement: this reference demonstrates that that isn't really much of a problem either. Creationists are always trying to use Haldane's "dilemma" as if it had not been addressed adequately. In reality, it is only their understanding that is inadequate.

Joe Felsenstein · 16 May 2016

Ravi said: ... People like Felsenstein model their populations as existing within a deteriorating environment where there is a shortage of resources or overpredation. There might be a time when this is indeed the case, but the fact is that populations usually exist under stable and normal conditions where there is a symbiotic balance between reproduction and the availabiity of food etc. ... It is a real flaw in Darwinist thinking - some organisms just don't reproduce in sufficient numbers for a slightly beneficial change to be "selected". The unrealistic cost of replacement, of course, is the dilemma faced by Haldane.
I published a paper on this in 1971, and I think it was a pretty damn good paper. So I think I know what Haldane's Dilemma is. If there is too small a reproductive excess, and if the lower fitness of one allele is imposed by deterioration of the environment, and if this occurs too often, the population can go extinct. But ... ... the beneficial allele does not stop increasing in frequency. All the time that the population is declining, the less fit allele is declining more than the beneficial allele. In my paper I noted that "too high a cost leads, not to a slowing of substitution, but to extinction." Lönnig's argument is completely different than Ravi's. He argues that the substitution does not occur, especially in a large population that has a substantial reproductive excess, owing to the large number of deaths that must occur in the process of whittling the population down to its equilibrium size. Lönnig is wrong about that, as I have showed here. Ravi misunderstands both Lönnig's argument and mine.

Ravi · 16 May 2016

Joe Felsenstein said: Lönnig's argument is completely different than Ravi's. He argues that the substitution does not occur, especially in a large population that has a substantial reproductive excess, owing to the large number of deaths that must occur in the process of whittling the population down to its equilibrium size. Lönnig is wrong about that, as I have showed here. Ravi misunderstands both Lönnig's argument and mine.
If there is a huge population, thriving and with no scarcity of resources or competition, then any reproductive excess survives. Any survival benefit becomes superfluous and redundant. I get it.

DS · 16 May 2016

Sorry if that link does not work for you. Here is the reference:

Grant and Flake (1974) Solutions to the cost of selection dilemma. PNAS 71(10):3863-5.

And I only hit submit once.

Joe Felsenstein · 16 May 2016

Ravi said:
Joe Felsenstein said: Lönnig's argument is completely different than Ravi's. He argues that the substitution does not occur, especially in a large population that has a substantial reproductive excess, owing to the large number of deaths that must occur in the process of whittling the population down to its equilibrium size. Lönnig is wrong about that, as I have showed here. Ravi misunderstands both Lönnig's argument and mine.
If there is a huge population, thriving and with no scarcity of resources or competition, then any reproductive excess survives. Any survival benefit becomes superfluous and redundant. I get it.
No. If there is a huge population, with no scarcity of resources and no competition, and a reproductive excess, then the population size increases even further, and so on until finally it gets big enough that its size increase is balanced by density-dependent mortality or infertility. But all the time, natural selection is working, and an allele with higher fitness is increasing in frequency. Lönnig is saying it won't increase, and he is wrong about that. Ravi is saying that population geneticists have incorrectly modeled the situation. Ravi is implying that somehow, in a large and growing population, advantageous alleles won't increase in frequency. Ravi is wrong.

eric · 16 May 2016

Joe Felsenstein said:
Ravi said: If there is a huge population, thriving and with no scarcity of resources or competition, then any reproductive excess survives. Any survival benefit becomes superfluous and redundant. I get it.
No. If there is a huge population, with no scarcity of resources and no competition, and a reproductive excess, then the population size increases even further, and so on until finally it gets big enough that its size increase is balanced by density-dependent mortality or infertility.
Its worth noting that even in this case, a favorable gene can spread through the population. Your descendants just have to become per capita more frequent than others'. As the joke goes, you don't have to outrun the bear to 'win,' you just have to outrun the guy standing next to you.

Joe Felsenstein · 16 May 2016

In effect, what Ravi is saying is that if you and the other runner are successfully outrunning the bear, then neither runner will get ahead of the other.

Ravi · 16 May 2016

Ravi is implying that somehow, in a large and growing population, advantageous alleles won't increase in frequency. Ravi is wrong.
Any survivial/reproductive benefit in a population where there is no significant competition for resources, or where there is little predation, will not propagate through the population much more than by random chance. But even if those with the beneficial allele had more suriving offpsring, any "substiution" would only work if those without it produced fewer offspring than normal. And once the population stabilizes, the benefit of reproductive success becomes less. There is no model in pop genetics where the population is thriving and multiplying, only where it is struggling to survive in a hostile environment.

Joe Felsenstein · 16 May 2016

Wrong. Population geneticists model all kinds of cases. I know. I compiled the only bibliography ever compiled for the field.

See above comment by me about the two runners who are outrunning the bear.

eric · 16 May 2016

Joe Felsenstein said: In effect, what Ravi is saying is that if you and the other runner are successfully outrunning the bear, then neither runner will get ahead of the other.
Yep! :) Which is funny, because these guys keep trying to use statistics to attack evolution while not realizing that 'everyone running exactly the same speed' is a lot less statistically likely than a distribution of speeds. Or to get away from the analogy: we statistically expect differential reproductive success in all circumstances; it is hard to set up a situation where it doesn't occur. Ravi and Byers seem to have the opposite opinion, that it is hard to set up a situation where differential reproductive success does occur.

eric · 16 May 2016

Ravi said: But even if those with the beneficial allele had more suriving offpsring, any "substiution" would only work if those without it produced fewer offspring than normal. And once the population stabilizes, the benefit of reproductive success becomes less.
What you're missing is that "normal" is relative. If we are in a "bearish" decline period and most families have only 1 successful kid per generation while my family line has 2, my genes will spread through the (declining) population. But then if there's a "bullish" period where the population is exploding because everyone has 3 successful kids per generation while my line has 5, my genes will still spread through the population. My descendants only have to do better than whatever normal is during their generation, there is no magical objective value of 'normal' they must exceed. Of course if the population as a whole is reproducing below the replacement rate, that may be a pyrrhic genetic victory for me as my species goes extinct. But your insistence that my genes can't spread through a population under one or more of these circumstances is just wrong. Barring some mechanism that prevents differential reproductive success, its going to happen. And yes, that means its going to happen in declining species, in growing species, and in population-stable species.

Just Bob · 16 May 2016

Ravi, before you try to teach population genetics to scientists, see if you can teach Robert Byers to spell huge.

Michael Fugate · 16 May 2016

Why let facts get in the way of belief?

Michael Fugate · 16 May 2016

Ravi's and Robert's motto: "Why let facts get in the way of belief?"

prongs · 16 May 2016

Ravi said: Any survivial/reproductive benefit in a population where there is no significant competition ....
There is ALWAYS competition, among the members of any population - always. Males compete for females. Females compete for males, and nesting sites. With unlimited resources and no predation, there will still be competition, within the population.
... will not propagate through the population much more than by random chance. {italics added for emphasis}
"not much more" is all it takes for natural selection, and thus evolution, to work. "Just a little more than random" and you've got it! The Diversity of Life on Earth

eric · 16 May 2016

Michael Fugate said: Ravi's and Robert's motto: "Why let facts get in the way of belief?"
There is a joke in here somewhere about the US average family size being 2.5 kids.

Just Bob · 16 May 2016

prongs said: "Just a little more than random" and you've got it! The Diversity of Life on Earth
And back to the casino: "Just a little more than random is all it takes for us to get rich." Some gamblers, as individuals can win. Many can, and win big. But as a group, they lose. And the casino wins steadily, with "just a little more than random" edge.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 16 May 2016

Dave Luckett said: George is either a raging loony, or he's imitating one. It's impossible to say which, but my instinct is that he might be a bit too good to be true.
Hello! I am not calling anybody names or a "raging loony"! So can you explain what you really mean, and why? Or simply shut-up! As you are talking non-sense! George - Pure Logic and Logic.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 16 May 2016

Particularly I still do not understand MEOSIS and MITOSOS! Nor chromosomes either! So ALELES is like pushing it!

No doubt good traits in a population, are expected to take first stage in the process.

Though in my case, my offspring are of lower genetic degree!

Can you explain this for me please?

George - Pure Logic and Logic.

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 16 May 2016

sorry. MITOSIS!

Just Bob · 16 May 2016

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f said: sorry. MITOSIS!
You also misspelled meiosis, but never mind. I'll probably regret asking, but what is meant by "Pure Logic and Logic"?

Just Bob · 16 May 2016

George, do you acknowledge that professional scientists probably know what they're talking about in their own fields of study? And are they more likely or less likely to be correct about facts in their fields than a non-scientist?

If you don't believe what biologists tell us about biology, why not?

Michael Fugate · 16 May 2016

Though in my case, my offspring are of lower genetic degree!
Consider the source?

Ravi · 16 May 2016

Joe Felsenstein said: Wrong. Population geneticists model all kinds of cases. I know. I compiled the only bibliography ever compiled for the field.
Virtually all pop genetics models involved a population of fixed size, although sometimes the population is "infinite" which makes the fixation or loss of the allele absolutely certain. See above comment by me about the two runners who are outrunning the bear. Staying ahead of the bear is not the same thing as winning the race.

Ravi · 16 May 2016

eric said: Its worth noting that even in this case, a favorable gene can spread through the population. Your descendants just have to become per capita more frequent than others'. As the joke goes, you don't have to outrun the bear to 'win,' you just have to outrun the guy standing next to you.
And a favorable gene can, in a small population, become lost whereas an unfavorable one can drift to fixation. A lot depends on the frequency of the mutation producing the variant.

eric · 16 May 2016

Ravi said: And a favorable gene can, in a small population, become lost whereas an unfavorable one can drift to fixation. A lot depends on the frequency of the mutation producing the variant.
Sure it can. But arguing that a favorable gene can be lost in a small population provides zero support for your prior claims that (I'm paraphrasing) a favorable gene won't propagate through a population when it's stable. Or when there are no predators and abundant food (you seem to have asserted both in different posts).
Staying ahead of the bear is not the same thing as winning the race.
Whether the bear eats nobody, one person, or many, some people are faster than others. That's the point: that whether a population is growing, stable, or declining, a gene can still propagate through the population via differential reproductive success. Must it progagate? Is this outcome inevitable? Of course not. The original carrier could die without kids. Or some disaster could wipe out the whole line. But AFAIK nobody is arguing that the fastest-on-paper runner always wins; we're simply arguing that somebody typically does; that everyone being equally fast is highly statistically unlikely. Your claim that gene frequencies don't change through selection under circumstances of stable populations or under circumstances where there is no predation or lack of is ridiculous.

Joe Felsenstein · 16 May 2016

Ravi said: ... And a favorable gene can, in a small population, become lost whereas an unfavorable one can drift to fixation. A lot depends on the frequency of the mutation producing the variant.
Try looking back at my original post in this thread. I calculated the fixation probability, in fact. For an allele that started at 50% frequency, it was not 0.5, but was 0.999999...999 (with 43 9s in all). Showing a dramatic effect of natural selection. In the example given, the population produced a strong reproductive excess and was at its carrying capacity. It was not a population barely surviving, on the edge of extinction. In short, the conditions that Ravi says would lead to natural selection having little or no effect are taken into account, and shown not to abolish natural selection.

Michael Fugate · 16 May 2016

To reiterate, if one looks at population genetics models - one will find that mutation, migration, population size, heritability, selection, etc. can be included. Even if selection is weaker than any or all of the other factors, selection is still acting and the result is different than if selection coefficient were = 0.

Robert Byers · 16 May 2016

Joe Felsenstein said:
Ravi said:
Joe Felsenstein said: Lönnig's argument is completely different than Ravi's. He argues that the substitution does not occur, especially in a large population that has a substantial reproductive excess, owing to the large number of deaths that must occur in the process of whittling the population down to its equilibrium size. Lönnig is wrong about that, as I have showed here. Ravi misunderstands both Lönnig's argument and mine.
If there is a huge population, thriving and with no scarcity of resources or competition, then any reproductive excess survives. Any survival benefit becomes superfluous and redundant. I get it.
No. If there is a huge population, with no scarcity of resources and no competition, and a reproductive excess, then the population size increases even further, and so on until finally it gets big enough that its size increase is balanced by density-dependent mortality or infertility. But all the time, natural selection is working, and an allele with higher fitness is increasing in frequency. Lönnig is saying it won't increase, and he is wrong about that. Ravi is saying that population geneticists have incorrectly modeled the situation. Ravi is implying that somehow, in a large and growing population, advantageous alleles won't increase in frequency. Ravi is wrong.
Possibly Ravi doesn't mean , in a large/growing pop, advantageous alleles won't increase but rather won't replace. You say natural selection is working on higher fitness but in a thriving, high, pop everyone is fit. Your saying the original pop doesn't need any interference with resources/competition but mere math will see it replaced. Indeed like natural selection has a mission. I don't understand the whole issue of the beneficial/genes/inmdivuduals interbreeding with the original ones. This passed me by. I imagined the new/improved individuals are making a new population BUT no reason to see the demise of the original. So no evolution affecting the original. I think thats what bothered Lonnig. Real populations are not affected, or must be, by a few advantageous genes in those and those outreproducing. Everyone is reproducing fine. So a hugh thriving original pop would not be changed. However i'm unsure about why the evolutionist side sees the outpacing reproduction REPLACING the original. Especially about interbreeding issue. By the way.The whole point to outreproducing is because the original must be under stress of rsources. On Jupiter, a hugh place, there could be a scenario of never not having enough resources and so why should out repropducing change or replace a original population. I still see the evolution side must have a competition/resource equation within the casino equation.

prongs · 16 May 2016

Robert Byers said: "On Jupiter, a hugh place, there could be a scenario of never not having enough resources .... the casino equation."
Robert, if everyone wins eventually on Jupiter (a huge place with unlimited resources), then just how many casinos are there, there? (IBIG says it cannot be infinite, because there are no real examples of infinity. One of you must be wrong.)

Just Bob · 16 May 2016

Robert, did you just retire, so now you can turn your full attention to explaining to all the scientists why they're wrong about all the science they've studied and researched over long careers?

Do you have any other hobbies?

Or is this maybe a Mission from God?

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 16 May 2016

Just Bob said:
https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f said: sorry. MITOSIS!
So. Pure can be as the common use of the word, or the way you find a mineral purely in its form in nature, embedded into rock, etc! Pure Logic, hence is my use, of defining all complete logic, including non-logic, bad logic, evil logic, etc. George. You also misspelled meiosis, but never mind. I'll probably regret asking, but what is meant by "Pure Logic and Logic"?

https://me.yahoo.com/a/TmT6tr96j8I7z.NSXVrs5i9QwNXEtw--#1813f · 16 May 2016

Just Bob said: George, do you acknowledge that professional scientists probably know what they're talking about in their own fields of study? And are they more likely or less likely to be correct about facts in their fields than a non-scientist? If you don't believe what biologists tell us about biology, why not?
You cannot believe even Science, unless proven to be correct! And to prove what you cannot see with indirect methods, as electron microscopes are even hard to use, you doubt the logic, of MEIOSIS and MITOSIS. You do the drawing, and ask why does a chromosome have an "X" shape (4 arms)? You see that they are supposed to interchange info from one side of the "X", and why not the two sides, and how much to interchange. Why not interchange a whole arm of the chromosome, and not some pieces. And so on. George. http://anagrammatt3.blogspot.ca/

Just Bob · 16 May 2016

Yep, sorry I asked, and no wiser.

Malcolm · 16 May 2016

Robert Byers said:
Joe Felsenstein said:
Ravi said:
Joe Felsenstein said: Lönnig's argument is completely different than Ravi's. He argues that the substitution does not occur, especially in a large population that has a substantial reproductive excess, owing to the large number of deaths that must occur in the process of whittling the population down to its equilibrium size. Lönnig is wrong about that, as I have showed here. Ravi misunderstands both Lönnig's argument and mine.
If there is a huge population, thriving and with no scarcity of resources or competition, then any reproductive excess survives. Any survival benefit becomes superfluous and redundant. I get it.
No. If there is a huge population, with no scarcity of resources and no competition, and a reproductive excess, then the population size increases even further, and so on until finally it gets big enough that its size increase is balanced by density-dependent mortality or infertility. But all the time, natural selection is working, and an allele with higher fitness is increasing in frequency. Lönnig is saying it won't increase, and he is wrong about that. Ravi is saying that population geneticists have incorrectly modeled the situation. Ravi is implying that somehow, in a large and growing population, advantageous alleles won't increase in frequency. Ravi is wrong.
Possibly Ravi doesn't mean , in a large/growing pop, advantageous alleles won't increase but rather won't replace. You say natural selection is working on higher fitness but in a thriving, high, pop everyone is fit. Your saying the original pop doesn't need any interference with resources/competition but mere math will see it replaced. Indeed like natural selection has a mission. I don't understand the whole issue of the beneficial/genes/inmdivuduals interbreeding with the original ones. This passed me by. I imagined the new/improved individuals are making a new population BUT no reason to see the demise of the original. So no evolution affecting the original. I think thats what bothered Lonnig. Real populations are not affected, or must be, by a few advantageous genes in those and those outreproducing. Everyone is reproducing fine. So a hugh thriving original pop would not be changed. However i'm unsure about why the evolutionist side sees the outpacing reproduction REPLACING the original. Especially about interbreeding issue. By the way.The whole point to outreproducing is because the original must be under stress of rsources. On Jupiter, a hugh place, there could be a scenario of never not having enough resources and so why should out repropducing change or replace a original population. I still see the evolution side must have a competition/resource equation within the casino equation.
Byers, Imagine a population of creatures that have a lifespan of less than 100 years. That means that 200 years from now, none of the current population will still be alive. Does that mean that the creatures will be extinct? No. It means that they will have been replaced by their offspring. Does that replacement require any kind of unusual event? No. That's how life works. Later generations replace previous generations.

Joe Felsenstein · 17 May 2016

George Purelogic (Masked Panda 813f) : If you doubt the conclusions of science with regard to meiosis and mitosis, a matter which was settled 100 years ago to the satisfaction of almost all scientists, and hasn't gotten any more uncertain since, please take the matter to some other forum. It is off-topic to this thread, and even off-topic to this whole forum.

I am moderating this thread, and will send further discussion of this issue to PT's Bathroom Wall. You don't want to go there, really.

And that holds for any replies to Purelogic on that issue -- they go to the BW too, to help discourage troll-chasing as well as trolling.

Ravi · 17 May 2016

Joe Felsenstein said: Try looking back at my original post in this thread. I calculated the fixation probability, in fact. For an allele that started at 50% frequency, it was not 0.5, but was 0.999999...999 (with 43 9s in all). Showing a dramatic effect of natural selection.
Fine. But a 50% starting frequency would be highly unusual. How did the allele reach such a frequency to begin with? To go from 0 to 50% is much more dramatic than from 50 to 100%, don't you think?
In the example given, the population produced a strong reproductive excess and was at its carrying capacity. It was not a population barely surviving, on the edge of extinction.
Wwll that raises another issue: In a population where there is little or no reproductive excess then there would be much less of a differential survival factor. There would be no "raw material" for natural selection to work with. And, as you admit, the cost of "substitution" might drive such a population to extinction.

Ravi · 17 May 2016

eric said: Sure it can. But arguing that a favorable gene can be lost in a small population provides zero support for your prior claims that (I'm paraphrasing) a favorable gene won't propagate through a population when it's stable. Or when there are no predators and abundant food (you seem to have asserted both in different posts).
I think Lönnig is arguing that for a rare beneficial mutation to reach **fixation** in a large population, by substituting itself for all other genotypes, we have to assume that there would have to be an unrealistic amount of failed survival/reproduction for this to happen. Rather, the beneficial variant may increase more relative to all others, but it would never replace them except in an extreme situation involving the mass culling of the population by a pathogen, for example. This, of course, could push the population to extinction in the end.

Michael Fugate · 17 May 2016

Ravi said:
eric said: Sure it can. But arguing that a favorable gene can be lost in a small population provides zero support for your prior claims that (I'm paraphrasing) a favorable gene won't propagate through a population when it's stable. Or when there are no predators and abundant food (you seem to have asserted both in different posts).
I think Lönnig is arguing that for a rare beneficial mutation to reach **fixation** in a large population, by substituting itself for all other genotypes, we have to assume that there would have to be an unrealistic amount of failed survival/reproduction for this to happen. Rather, the beneficial variant may increase more relative to all others, but it would never replace them except in an extreme situation involving the mass culling of the population by a pathogen, for example. This, of course, could push the population to extinction in the end.
Show us the math Ravi, show us the math.

Just Bob · 17 May 2016

Ravi, perhaps you could explain how or why there could be a "population where there is little or no reproductive excess."

In times of opportunity, such a species could not expand to take advantage of new territory or resources. In times of stress, when some potential breeders die before breeding, then the population would rapidly diminish and head for extinction. Excess breeders and offspring are a species' insurance against hard times.

And finally, how could a "population where there is little or no reproductive excess", say one with millions of individuals, ever reach a population of millions, if "there is little or no reproductive excess"?

Joe Felsenstein · 17 May 2016

Ravi said:
Joe Felsenstein said: Try looking back at my original post in this thread. I calculated the fixation probability, in fact. For an allele that started at 50% frequency, it was not 0.5, but was 0.999999...999 (with 43 9s in all). Showing a dramatic effect of natural selection.
Fine. But a 50% starting frequency would be highly unusual. How did the allele reach such a frequency to begin with? To go from 0 to 50% is much more dramatic than from 50 to 100%, don't you think?
We have been this way before. See my comment upthread here. It in turn notes that the issue Lönnig raised has been covered in my 2008 response on this blog to a similar argument made by Salvador Cordova. In short, even if there is only one copy of the favored allele in the initial population, natural selection has a dramatic effect on the probability of fixation. It makes the probability of fixation 396 times more probable than for a neutral alelele.
... and further said:
In the example given, the population produced a strong reproductive excess and was at its carrying capacity. It was not a population barely surviving, on the edge of extinction.
W[e]ll that raises another issue: In a population where there is little or no reproductive excess then there would be much less of a differential survival factor. There would be no "raw material" for natural selection to work with. And, as you admit, the cost of "substitution" might drive such a population to extinction.
If selection occurred among newborns, it shifts the gene frequencies among them. If there is a slight reproductive excess there are still gene frequency changes. Whether it reduces the reproductive excess enough to cause the population density to decline depends on whether the selection occurred because a new favorable mutation occurred, or the environment changed in a way making a preexisting allele deleterious. In the former case the new allele helps. In the latter case the environmental change hurts (but not the occurrence of the favorable allele). So there is no general principle saying that a rare favorable allele cannot have its frequency increased. Lönnig is wrong, and you are wrong to back him.

Joe Felsenstein · 17 May 2016

Michael Fugate said:
Ravi said: ... I think Lönnig is arguing that for a rare beneficial mutation to reach **fixation** in a large population, by substituting itself for all other genotypes, we have to assume that there would have to be an unrealistic amount of failed survival/reproduction for this to happen. Rather, the beneficial variant may increase more relative to all others, but it would never replace them except in an extreme situation involving the mass culling of the population by a pathogen, for example. This, of course, could push the population to extinction in the end.
Show us the math Ravi, show us the math.
I second that request.

Joe Felsenstein · 17 May 2016

Actually you can just computer-simulate that using the teaching program PopG (available here) which I distribute for use in courses teaching population genetics.

Ravi can try that and report the results here.

eric · 17 May 2016

Just Bob said: Ravi, perhaps you could explain how or why there could be a "population where there is little or no reproductive excess."
Ooh, ooh, I know! In means that in the U.S., where the average family has 2.5 kids, the vast majority of families have between 2.48 and 2.52 kids, with hardly any families having more or less than that range! See, I knew this thread could use that joke. :) I hope my snark serves to illustrate the point that a population's "reproductive excess" may have little to do with a lineage's differential reproductive success. You and I can live in a population that hits the 2.1 kids/family replacement rate on the nose...and you can still have 1 kid while I have 10. The average does not determine the distribution, and its the distribution that allows for changes in allele frequencies.

Robert Byers · 17 May 2016

My final post on this is my last hunch.
It occurs to me that the whole concept of there being a beneficial gene and so a advantageous individuals is another rub.
Just having or saying there is this advantage and so reproductive advantage is a interference in the original population.
I mean WHY is there a advantage? why at all? If the original pop is thriving and hugh wHY should there EVER be this benificial group interfering.
I see in this the flaw of the evolutionists on this issue/thread.
This , I think, is the complain from the DI.
Its not a math race but why is there a race.
In reality there never would be a beneficial gene/reproducing individuals. This wouldn't happen in these high pops of creatures.
Its an abstract concept that a real scientist dealing with mutations rejected.

A better way he could put it IS that a mutation would never bring a benefit for reproduction in a gugh/thriving group.
Thats the rub.

Malcolm · 17 May 2016

Robert Byers said: My final post on this is my last hunch. It occurs to me that the whole concept of there being a beneficial gene and so a advantageous individuals is another rub. Just having or saying there is this advantage and so reproductive advantage is a interference in the original population. I mean WHY is there a advantage? why at all? If the original pop is thriving and hugh wHY should there EVER be this benificial group interfering. I see in this the flaw of the evolutionists on this issue/thread. This , I think, is the complain from the DI. Its not a math race but why is there a race. In reality there never would be a beneficial gene/reproducing individuals. This wouldn't happen in these high pops of creatures. Its an abstract concept that a real scientist dealing with mutations rejected. A better way he could put it IS that a mutation would never bring a benefit for reproduction in a gugh/thriving group. Thats the rub.
Are you high?

Just Bob · 17 May 2016

Sorry, Robert, but it's really hard to take you seriously when you go "gugh".

I mean, the stuff you say is ignorantly wrong, but "hugh" and "gugh" make it hard not to burst out laughing.

Dave Luckett · 18 May 2016

Malcolm said:
Robert Byers said: My final post on this is my last hunch. It occurs to me that the whole concept of there being a beneficial gene and so a advantageous individuals is another rub. Just having or saying there is this advantage and so reproductive advantage is a interference in the original population. I mean WHY is there a advantage? why at all? If the original pop is thriving and hugh wHY should there EVER be this benificial group interfering. I see in this the flaw of the evolutionists on this issue/thread. This , I think, is the complain from the DI. Its not a math race but why is there a race. In reality there never would be a beneficial gene/reproducing individuals. This wouldn't happen in these high pops of creatures. Its an abstract concept that a real scientist dealing with mutations rejected. A better way he could put it IS that a mutation would never bring a benefit for reproduction in a gugh/thriving group. Thats the rub.
Are you high?
No, he's not, unless he's over the moon every time he posts here. This is just about par, for Byers. It's like trying to assess the poetry of William Topaz McGonagall - was he really unconscious of what he was doing, or was he doing it deliberately? If the latter, he was one of the great masters of language. The same with Byers. Can a person really be so sublimely unaware of the sheer shambolic incoherence of his output? Is it possible for someone who can speak at all to be so catastrophically incapable of fashioning a meaningful sentence? Could anyone who can make any kind of sense of reality be so abysmally incompetent at communication? And how on earth can someone be so blissfully unaware of his desperate ignorance and hapless incapacity? Byers is the most effective creationist I have ever encountered. When he expounds, even creationists have to back away. Sure, nothing a creationist can say is so crazy that some other creationist will not endorse it - but with Byers even that principle is rendered moot. Not only does Byers say utterly crazy things, he says things that have no identifiable meaning at all. Not even a dyed-in-the-wool master of creationist bafflegab can nod along to "Its not a math race but why is there a race?" What in the name of Ghu does that even mean? So does Byers do this deliberately? I would be fascinated to learn, but I don't know. I only know that he's a peerless gift to rational discourse, in the same way that McGonagall was to English poetry.

Malcolm · 18 May 2016

Dave Luckett said:
Malcolm said:
Robert Byers said: My final post on this is my last hunch. It occurs to me that the whole concept of there being a beneficial gene and so a advantageous individuals is another rub. Just having or saying there is this advantage and so reproductive advantage is a interference in the original population. I mean WHY is there a advantage? why at all? If the original pop is thriving and hugh wHY should there EVER be this benificial group interfering. I see in this the flaw of the evolutionists on this issue/thread. This , I think, is the complain from the DI. Its not a math race but why is there a race. In reality there never would be a beneficial gene/reproducing individuals. This wouldn't happen in these high pops of creatures. Its an abstract concept that a real scientist dealing with mutations rejected. A better way he could put it IS that a mutation would never bring a benefit for reproduction in a gugh/thriving group. Thats the rub.
Are you high?
No, he's not, unless he's over the moon every time he posts here. This is just about par, for Byers. It's like trying to assess the poetry of William Topaz McGonagall - was he really unconscious of what he was doing, or was he doing it deliberately? If the latter, he was one of the great masters of language. The same with Byers. Can a person really be so sublimely unaware of the sheer shambolic incoherence of his output? Is it possible for someone who can speak at all to be so catastrophically incapable of fashioning a meaningful sentence? Could anyone who can make any kind of sense of reality be so abysmally incompetent at communication? And how on earth can someone be so blissfully unaware of his desperate ignorance and hapless incapacity? Byers is the most effective creationist I have ever encountered. When he expounds, even creationists have to back away. Sure, nothing a creationist can say is so crazy that some other creationist will not endorse it - but with Byers even that principle is rendered moot. Not only does Byers say utterly crazy things, he says things that have no identifiable meaning at all. Not even a dyed-in-the-wool master of creationist bafflegab can nod along to "Its not a math race but why is there a race?" What in the name of Ghu does that even mean? So does Byers do this deliberately? I would be fascinated to learn, but I don't know. I only know that he's a peerless gift to rational discourse, in the same way that McGonagall was to English poetry.
Oh, it wasn't that I didn't understand what he was trying to say. I've read a lot of Byers. The problem I had was that I think I did understand his "argument". Saying that it isn't possible to have a reproductive advantage in a large population is pretty moronic, even for Byers.

Michael Fugate · 18 May 2016

"Saying that it isn’t possible to have a reproductive advantage in a large population is pretty moronic, even for Byers."

Kind of like saying it isn't possible to have a sales advantage in the fizzy drinks market...

eric · 18 May 2016

Michael Fugate said: "Saying that it isn’t possible to have a reproductive advantage in a large population is pretty moronic, even for Byers." Kind of like saying it isn't possible to have a sales advantage in the fizzy drinks market...
Like saying the 14th century European population was just too large for a mutation providing some resistance against the plague to have been in the population at that time. Or like saying that Michael Phelps is as nonexistent as Gthe tooth fairy.

Robert Byers · 18 May 2016

eric said:
Michael Fugate said: "Saying that it isn’t possible to have a reproductive advantage in a large population is pretty moronic, even for Byers." Kind of like saying it isn't possible to have a sales advantage in the fizzy drinks market...
Like saying the 14th century European population was just too large for a mutation providing some resistance against the plague to have been in the population at that time. Or like saying that Michael Phelps is as nonexistent as Gthe tooth fairy.
Another last post. thats different. There is a problem. there is extinction and pressure to survive. yet the whole conversation got away on itself , i think,, because any reproductive advantage must mean there is a great reason for it. Something changed something. The fix is in. So its not a true math/casino case about evolutionary change. My side was REALLY fighting that evolution does not take place because of some mutation that appeared,. IT MUST BE EFFECTIVE. Not just exist. I had as a finale note we all were careless. There was no justification for a reproductive advantage. That itself is the spoiler to the math. The interference with pure math affecting populations. Evolution does not proceed by mutations but by desperate interference for a mutation to succeed. This never happened however as behind actual biological origins. its a fable and wrongly claiming math as a helpmate.

gnome de net · 18 May 2016

Rebort Beyrs said: My final post on this...
Rebort Beyrs also said: Another last post.
Which means that nothing Rebort Beyrs says can be trusted.

Joe Felsenstein · 18 May 2016

He's in the great tradition of opera singers who give annual "farewell tours".

Michael Fugate · 19 May 2016

Robert Byers said:
eric said:
Michael Fugate said: "Saying that it isn’t possible to have a reproductive advantage in a large population is pretty moronic, even for Byers." Kind of like saying it isn't possible to have a sales advantage in the fizzy drinks market...
Like saying the 14th century European population was just too large for a mutation providing some resistance against the plague to have been in the population at that time. Or like saying that Michael Phelps is as nonexistent as Gthe tooth fairy.
Another last post. thats different. There is a problem. there is extinction and pressure to survive. yet the whole conversation got away on itself , i think,, because any reproductive advantage must mean there is a great reason for it. Something changed something. The fix is in. So its not a true math/casino case about evolutionary change. My side was REALLY fighting that evolution does not take place because of some mutation that appeared,. IT MUST BE EFFECTIVE. Not just exist. I had as a finale note we all were careless. There was no justification for a reproductive advantage. That itself is the spoiler to the math. The interference with pure math affecting populations. Evolution does not proceed by mutations but by desperate interference for a mutation to succeed. This never happened however as behind actual biological origins. its a fable and wrongly claiming math as a helpmate.
If peahens like mates with elaborate feathers, then elaborate feathers have an advantage. If people like mango-flavored drinks, then they have an advantage. Doesn't need to be a plan. Doesn't need to help one survive. Doesn't need any intelligence - it can even appear counter-intuitive.

Scott F · 19 May 2016

Ravi said:
Joe Felsenstein said: Wrong. Population geneticists model all kinds of cases. I know. I compiled the only bibliography ever compiled for the field.
Virtually all pop genetics models involved a population of fixed size, although sometimes the population is "infinite" which makes the fixation or loss of the allele absolutely certain. See above comment by me about the two runners who are outrunning the bear. Staying ahead of the bear is not the same thing as winning the race.
You say, "winning the race", as though there is a goal, a finish line. "Hey! We now have humans. We've won the race, and we can stop evolving." Sorry, that's not how evolution works. There is always another bear, and the race never ends. In fact, there was an article in this week's Economist that was describing research that showed that by analyzing enough entire human genomes, the scientists were able to clearly identify human genes that have evolved in just that last 2,000 years, and how they evolved. They cite, in particular, lactose tolerance and blond hair, as being fairly easy to track, as they rely on just a very few genes. But, to answer your point directly. Staying ahead of the bear *is*, by definition, "winning the race". What other possible definition of "wining" could there be in an evolutionary sense, other than not getting eaten and thereby living to produce offspring? That is the "natural" definition of "winning".

eric · 20 May 2016

Scott F said:
Ravi said: Staying ahead of the bear is not the same thing as winning the race.
You say, "winning the race", as though there is a goal, a finish line. "Hey! We now have humans. We've won the race, and we can stop evolving." Sorry, that's not how evolution works. There is always another bear, and the race never ends.
To be fair to Ravi, I was the one who started using that analogy. He's just responding to me using my own construct. The way I was using it, "winning the race" means you have a mutation-produced advantage over other humans that also successfully reproduce, that's all. It wasn't intended to imply an end-goal or completion of some plan. Pointing out that there can still be "a winner" when multiple people escape the bear was intended to show that Ravi is wrong in thinking that positive adaptations cannot fix in a population under conditions of plenty. Of course they can; just because a whole bunch of us have lots of successful offspring doesn't mean that all our gene lines must have the relatively same amount of reproductive success.
In fact, there was an article in this week's Economist that was describing research that showed that by analyzing enough entire human genomes, the scientists were able to clearly identify human genes that have evolved in just that last 2,000 years, and how they evolved. They cite, in particular, lactose tolerance and blond hair, as being fairly easy to track, as they rely on just a very few genes.
Full disclosure, I *don't* read the Economist and didn't do a whole lot of background research before citing those examples. So if there's any discrepancy between my use of those examples and theirs, you should probably believe The Economist.

Scott F · 21 May 2016

eric said:
Ravi said: Staying ahead of the bear is not the same thing as winning the race.
Scott F said: You say, "winning the race", as though there is a goal, a finish line. "Hey! We now have humans. We've won the race, and we can stop evolving." Sorry, that's not how evolution works. There is always another bear, and the race never ends.
To be fair to Ravi, I was the one who started using that analogy. He's just responding to me using my own construct. The way I was using it, "winning the race" means you have a mutation-produced advantage over other humans that also successfully reproduce, that's all. It wasn't intended to imply an end-goal or completion of some plan. Pointing out that there can still be "a winner" when multiple people escape the bear was intended to show that Ravi is wrong in thinking that positive adaptations cannot fix in a population under conditions of plenty. Of course they can; just because a whole bunch of us have lots of successful offspring doesn't mean that all our gene lines must have the relatively same amount of reproductive success.
In fact, there was an article in this week's Economist that was describing research that showed that by analyzing enough entire human genomes, the scientists were able to clearly identify human genes that have evolved in just that last 2,000 years, and how they evolved. They cite, in particular, lactose tolerance and blond hair, as being fairly easy to track, as they rely on just a very few genes.
Full disclosure, I *don't* read the Economist and didn't do a whole lot of background research before citing those examples. So if there's any discrepancy between my use of those examples and theirs, you should probably believe The Economist.
Hi eric, I don't think you need to "apologize" for Ravi, or make excuses for him. I don't think you are, but I think you're being too generous. I thought your analogy was quite clear. You did not say, "win the race", you simply said "win". And, it was clear that you were referring to the genetic competition between the two-or-more people fleeing the bear. Instead, Ravi took and made it a "race", and changed it to a race between the people and the bear. The addition of the notion of a "race" was Ravi's. While the shift in focus of who is in the race and who is winning is subtle, but I believe it is significant and telling. (Yes, Evolution is often described as an "arms race" between predator and prey, or between host and parasite. But again, I don't think that was where Ravi was going.) Lastly, don't put too much into the Economist. It is a popular news magazine, with a dedicated science section. It's better than most news magazines, but it isn't anything like a scientific journal. The article simply summarized in a column and a half a news story about some scientific research. I cited it, only because it showed that current research conclusively shows that evolution is happening even in "modern" times, and that it shows that current scientific study directly supports the examples you referred to. Evolution, even the evolution of humans, didn't stop when humans settled into cities and started writing down their history. You can't see evolution happening, as Byers and Creationists insist upon, but it hasn't "stopped" either. You can find the article here. It's probably short enough and non-technical enough that even Byers could read it, and it directly refutes his "arguments", such as they are. The article links to the original study at "bioRxiv.org", and the full paper here.